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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 00:47:05 UTC
Update Date2021-09-26 22:57:34 UTC
HMDB IDHMDB0247713
Secondary Accession NumbersNone
Metabolite Identification
Common NamePentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-
DescriptionPentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-, also known as N-3-quinolinoyl-glutamyl-N,N-alpha-di-N-pentylamine, belongs to the class of organic compounds known as glutamic acid and derivatives. Glutamic acid and derivatives are compounds containing glutamic acid or a derivative thereof resulting from reaction of glutamic acid at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom. Based on a literature review very few articles have been published on Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-. This compound has been identified in human blood as reported by (PMID: 31557052 ). Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (r)- is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
N-3-Quinolinoyl-glutamyl-N,N-alpha-di-N-pentylamineHMDB
Chemical FormulaC25H35N3O4
Average Molecular Weight441.572
Monoisotopic Molecular Weight441.262756619
IUPAC Name4-(dipentylcarbamoyl)-4-[(quinolin-3-yl)formamido]butanoic acid
Traditional Name4-(dipentylcarbamoyl)-4-(quinolin-3-ylformamido)butanoic acid
CAS Registry NumberNot Available
SMILES
CCCCCN(CCCCC)C(=O)C(CCC(O)=O)NC(=O)C1=CC2=CC=CC=C2N=C1
InChI Identifier
InChI=1S/C25H35N3O4/c1-3-5-9-15-28(16-10-6-4-2)25(32)22(13-14-23(29)30)27-24(31)20-17-19-11-7-8-12-21(19)26-18-20/h7-8,11-12,17-18,22H,3-6,9-10,13-16H2,1-2H3,(H,27,31)(H,29,30)
InChI KeyLVIZXRRZYVZZEN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as glutamic acid and derivatives. Glutamic acid and derivatives are compounds containing glutamic acid or a derivative thereof resulting from reaction of glutamic acid at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentGlutamic acid and derivatives
Alternative Parents
Substituents
  • Glutamic acid or derivatives
  • N-acyl-alpha amino acid or derivatives
  • Quinoline-3-carboxamide
  • Alpha-amino acid amide
  • Quinoline
  • Pyridine carboxylic acid or derivatives
  • N-acyl-amine
  • Pyridine
  • Benzenoid
  • Tertiary carboxylic acid amide
  • Heteroaromatic compound
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Organoheterocyclic compound
  • Azacycle
  • Carbonyl group
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.77ALOGPS
logP3.81ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)4.22ChemAxon
pKa (Strongest Basic)2.98ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area99.6 ŲChemAxon
Rotatable Bond Count14ChemAxon
Refractivity123.89 m³·mol⁻¹ChemAxon
Polarizability50.68 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+208.70630932474
DeepCCS[M-H]-206.34830932474
DeepCCS[M-2H]-240.82730932474
DeepCCS[M+Na]+216.99430932474
AllCCS[M+H]+208.732859911
AllCCS[M+H-H2O]+206.932859911
AllCCS[M+NH4]+210.332859911
AllCCS[M+Na]+210.732859911
AllCCS[M-H]-197.732859911
AllCCS[M+Na-2H]-198.932859911
AllCCS[M+HCOO]-200.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-CCCCCN(CCCCC)C(=O)C(CCC(O)=O)NC(=O)C1=CC2=CC=CC=C2N=C14635.7Standard polar33892256
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-CCCCCN(CCCCC)C(=O)C(CCC(O)=O)NC(=O)C1=CC2=CC=CC=C2N=C12788.1Standard non polar33892256
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-CCCCCN(CCCCC)C(=O)C(CCC(O)=O)NC(=O)C1=CC2=CC=CC=C2N=C13601.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-,2TMS,isomer #1CCCCCN(CCCCC)C(=O)C(CCC(=O)O[Si](C)(C)C)N(C(=O)C1=CN=C2C=CC=CC2=C1)[Si](C)(C)C3551.5Semi standard non polar33892256
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-,2TMS,isomer #1CCCCCN(CCCCC)C(=O)C(CCC(=O)O[Si](C)(C)C)N(C(=O)C1=CN=C2C=CC=CC2=C1)[Si](C)(C)C3513.5Standard non polar33892256
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-,2TMS,isomer #1CCCCCN(CCCCC)C(=O)C(CCC(=O)O[Si](C)(C)C)N(C(=O)C1=CN=C2C=CC=CC2=C1)[Si](C)(C)C4398.2Standard polar33892256
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-,2TBDMS,isomer #1CCCCCN(CCCCC)C(=O)C(CCC(=O)O[Si](C)(C)C(C)(C)C)N(C(=O)C1=CN=C2C=CC=CC2=C1)[Si](C)(C)C(C)(C)C4044.0Semi standard non polar33892256
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-,2TBDMS,isomer #1CCCCCN(CCCCC)C(=O)C(CCC(=O)O[Si](C)(C)C(C)(C)C)N(C(=O)C1=CN=C2C=CC=CC2=C1)[Si](C)(C)C(C)(C)C3837.1Standard non polar33892256
Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)-,2TBDMS,isomer #1CCCCCN(CCCCC)C(=O)C(CCC(=O)O[Si](C)(C)C(C)(C)C)N(C(=O)C1=CN=C2C=CC=CC2=C1)[Si](C)(C)C(C)(C)C4450.1Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4i-6593000000-501083b1d3da72be8f7c2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- 10V, Positive-QTOFsplash10-0006-1130900000-6265ef03ea60a256ffd32021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- 20V, Positive-QTOFsplash10-006x-5921300000-0db48fb78cf3831b2f0f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- 40V, Positive-QTOFsplash10-052f-9601100000-f559bddb61a85316cf332021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- 10V, Negative-QTOFsplash10-0006-0000900000-1b58c0399216abbadf612021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- 20V, Negative-QTOFsplash10-00fu-0109300000-7c89b4442d44e818dfa62021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pentanoic acid, 5-(dipentylamino)-5-oxo-4-((3-quinolinylcarbonyl)amino)-, (R)- 40V, Negative-QTOFsplash10-076r-0937000000-ca7cea9c76ff6d19bd532021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8156346
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound9980754
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]