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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 01:18:53 UTC
Update Date2021-09-26 22:58:16 UTC
HMDB IDHMDB0248145
Secondary Accession NumbersNone
Metabolite Identification
Common NameAlizarin complexone
DescriptionAlizarin complexone, also known as alizarin fluorine blue or az-C, belongs to the class of organic compounds known as hydroxyanthraquinones. Hydroxyanthraquinones are compounds containing a hydroxyanthraquinone moiety, which consists of an anthracene bearing a quinone, and hydroxyl group. Based on a literature review a significant number of articles have been published on Alizarin complexone. This compound has been identified in human blood as reported by (PMID: 31557052 ). Alizarin complexone is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Alizarin complexone is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
1,2-Dihydroxy-anthrachinon-3-methylen-iminodiessigsaeureChEBI
3,4-Dihydroxyanthraquinon-2-ylmethyliminodi(acetic acid)ChEBI
3-Aminomethylalizarin-N,N-diacetic acidChEBI
Alizarin complexonChEBI
Alizarin fluorine blueChEBI
Alizarine complexonChEBI
Alizarine complexoneChEBI
Alizarine fluorine blueChEBI
AlizarinkomplexonChEBI
Az-CChEBI
{[(3,4-dihydroxy-2-anthraquinonyl)methyl]imino}diacetic acid dihydrateChEBI
3,4-Dihydroxyanthraquinon-2-ylmethyliminodi(acetate)Generator
3-Aminomethylalizarin-N,N-diacetateGenerator
{[(3,4-dihydroxy-2-anthraquinonyl)methyl]imino}diacetate dihydrateGenerator
{[(3,4-dihydroxy-2-anthraquinonyl)methyl]imino}diacetic acid dihydric acidGenerator
Chemical FormulaC19H15NO8
Average Molecular Weight385.328
Monoisotopic Molecular Weight385.079766447
IUPAC Name2-[(carboxymethyl)[(3,4-dihydroxy-9,10-dioxo-9,10-dihydroanthracen-2-yl)methyl]amino]acetic acid
Traditional Namealizarin complexone
CAS Registry NumberNot Available
SMILES
OC(=O)CN(CC(O)=O)CC1=C(O)C(O)=C2C(=O)C3=CC=CC=C3C(=O)C2=C1
InChI Identifier
InChI=1S/C19H15NO8/c21-13(22)7-20(8-14(23)24)6-9-5-12-15(19(28)16(9)25)18(27)11-4-2-1-3-10(11)17(12)26/h1-5,25,28H,6-8H2,(H,21,22)(H,23,24)
InChI KeyPWIGYBONXWGOQE-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as hydroxyanthraquinones. Hydroxyanthraquinones are compounds containing a hydroxyanthraquinone moiety, which consists of an anthracene bearing a quinone, and hydroxyl group.
KingdomOrganic compounds
Super ClassBenzenoids
ClassAnthracenes
Sub ClassAnthraquinones
Direct ParentHydroxyanthraquinones
Alternative Parents
Substituents
  • Hydroxyanthraquinone
  • Alpha-amino acid
  • Alpha-amino acid or derivatives
  • Aryl ketone
  • 1-hydroxy-4-unsubstituted benzenoid
  • Aralkylamine
  • Dicarboxylic acid or derivatives
  • Vinylogous acid
  • Amino acid or derivatives
  • Amino acid
  • Tertiary aliphatic amine
  • Tertiary amine
  • Ketone
  • Carboxylic acid derivative
  • Carboxylic acid
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organopnictogen compound
  • Amine
  • Organic oxygen compound
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP1.32ALOGPS
logP0.18ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)1.64ChemAxon
pKa (Strongest Basic)4.9ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area152.44 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity95.82 m³·mol⁻¹ChemAxon
Polarizability36.85 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+188.44630932474
DeepCCS[M-H]-186.08830932474
DeepCCS[M-2H]-219.92330932474
DeepCCS[M+Na]+195.13930932474
AllCCS[M+H]+185.232859911
AllCCS[M+H-H2O]+182.532859911
AllCCS[M+NH4]+187.732859911
AllCCS[M+Na]+188.432859911
AllCCS[M-H]-186.532859911
AllCCS[M+Na-2H]-186.232859911
AllCCS[M+HCOO]-186.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Alizarin complexoneOC(=O)CN(CC(O)=O)CC1=C(O)C(O)=C2C(=O)C3=CC=CC=C3C(=O)C2=C14520.9Standard polar33892256
Alizarin complexoneOC(=O)CN(CC(O)=O)CC1=C(O)C(O)=C2C(=O)C3=CC=CC=C3C(=O)C2=C12325.4Standard non polar33892256
Alizarin complexoneOC(=O)CN(CC(O)=O)CC1=C(O)C(O)=C2C(=O)C3=CC=CC=C3C(=O)C2=C13624.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (Non-derivatized) - 70eV, Positivesplash10-0zfu-4097000000-9482090bec4527dc42812021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_3_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_3_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TMS_4_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_2_4) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_3_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_3_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_3_3) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Alizarin complexone GC-MS (TBDMS_4_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Alizarin complexone 10V, Positive-QTOFsplash10-0udr-0097000000-dd6e2072ab3366d7945c2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Alizarin complexone 20V, Positive-QTOFsplash10-0udi-0090000000-6419d957edf045afc4892021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Alizarin complexone 40V, Positive-QTOFsplash10-0udi-0090000000-6331baba805b2f1263472021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Alizarin complexone 10V, Negative-QTOFsplash10-0f89-0059000000-b561e72ccb003bb17deb2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Alizarin complexone 20V, Negative-QTOFsplash10-0uec-0094000000-2d4b5a875f0db4a5ed252021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Alizarin complexone 40V, Negative-QTOFsplash10-0gw3-8290000000-bb172ffb6a22bc5703c52021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID58641
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound65132
PDB IDNot Available
ChEBI ID53088
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]