Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 03:39:38 UTC
Update Date2021-09-26 22:59:52 UTC
HMDB IDHMDB0249167
Secondary Accession NumbersNone
Metabolite Identification
Common NameBetrixaban
DescriptionBetrixaban, also known as PRT 054021 or bevyxxa, belongs to the class of organic compounds known as benzanilides. These are aromatic compounds containing an anilide group in which the carboxamide group is substituted with a benzene ring. They have the general structure RNC(=O)R', where R,R'= benzene. Based on a literature review a significant number of articles have been published on Betrixaban. This compound has been identified in human blood as reported by (PMID: 31557052 ). Betrixaban is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Betrixaban is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
PRT 054021ChEBI
PRT054021ChEBI
BevyxxaKegg
N-(5-Chloropyridin-2-yl)-2-(4-(N,N-dimethylcarbamimidoyl)benzamido)-5-methoxybenzamideMeSH
Chemical FormulaC23H22ClN5O3
Average Molecular Weight451.91
Monoisotopic Molecular Weight451.1411173
IUPAC NameN-(5-chloropyridin-2-yl)-2-[4-(N,N-dimethylcarbamimidoyl)benzamido]-5-methoxybenzamide
Traditional Namebetrixaban
CAS Registry NumberNot Available
SMILES
COC1=CC=C(NC(=O)C2=CC=C(C=C2)C(=N)N(C)C)C(=C1)C(=O)NC1=CC=C(Cl)C=N1
InChI Identifier
InChI=1S/C23H22ClN5O3/c1-29(2)21(25)14-4-6-15(7-5-14)22(30)27-19-10-9-17(32-3)12-18(19)23(31)28-20-11-8-16(24)13-26-20/h4-13,25H,1-3H3,(H,27,30)(H,26,28,31)
InChI KeyXHOLNRLADUSQLD-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzanilides. These are aromatic compounds containing an anilide group in which the carboxamide group is substituted with a benzene ring. They have the general structure RNC(=O)R', where R,R'= benzene.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassAnilides
Direct ParentBenzanilides
Alternative Parents
Substituents
  • Benzanilide
  • Benzamide
  • Benzoic acid or derivatives
  • Methoxyaniline
  • Anisole
  • Phenoxy compound
  • Benzoyl
  • Phenol ether
  • Methoxybenzene
  • Alkyl aryl ether
  • Imidolactam
  • Pyridine
  • Aryl chloride
  • Aryl halide
  • Heteroaromatic compound
  • Vinylogous amide
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Azacycle
  • Organoheterocyclic compound
  • Carboximidamide
  • Amidine
  • Carboxylic acid amidine
  • Ether
  • Carboxylic acid derivative
  • Organic oxide
  • Organohalogen compound
  • Organochloride
  • Organonitrogen compound
  • Organic nitrogen compound
  • Organooxygen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.86ALOGPS
logP3.03ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)11.63ChemAxon
pKa (Strongest Basic)10.91ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area107.41 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity138.29 m³·mol⁻¹ChemAxon
Polarizability47.62 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+212.22130932474
DeepCCS[M-H]-209.82630932474
DeepCCS[M-2H]-242.7130932474
DeepCCS[M+Na]+218.53230932474
AllCCS[M+H]+207.232859911
AllCCS[M+H-H2O]+204.932859911
AllCCS[M+NH4]+209.232859911
AllCCS[M+Na]+209.832859911
AllCCS[M-H]-203.932859911
AllCCS[M+Na-2H]-204.332859911
AllCCS[M+HCOO]-204.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
BetrixabanCOC1=CC=C(NC(=O)C2=CC=C(C=C2)C(=N)N(C)C)C(=C1)C(=O)NC1=CC=C(Cl)C=N15557.4Standard polar33892256
BetrixabanCOC1=CC=C(NC(=O)C2=CC=C(C=C2)C(=N)N(C)C)C(=C1)C(=O)NC1=CC=C(Cl)C=N13984.5Standard non polar33892256
BetrixabanCOC1=CC=C(NC(=O)C2=CC=C(C=C2)C(=N)N(C)C)C(=C1)C(=O)NC1=CC=C(Cl)C=N14410.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Betrixaban,1TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C14162.8Semi standard non polar33892256
Betrixaban,1TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C13662.3Standard non polar33892256
Betrixaban,1TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C15639.7Standard polar33892256
Betrixaban,1TMS,isomer #2COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)C(C(=O)NC2=CC=C(Cl)C=N2)=C14289.3Semi standard non polar33892256
Betrixaban,1TMS,isomer #2COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)C(C(=O)NC2=CC=C(Cl)C=N2)=C13881.7Standard non polar33892256
Betrixaban,1TMS,isomer #2COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)C(C(=O)NC2=CC=C(Cl)C=N2)=C15761.2Standard polar33892256
Betrixaban,1TMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C14235.1Semi standard non polar33892256
Betrixaban,1TMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C13643.0Standard non polar33892256
Betrixaban,1TMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C15721.5Standard polar33892256
Betrixaban,2TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C13994.8Semi standard non polar33892256
Betrixaban,2TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C13649.2Standard non polar33892256
Betrixaban,2TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C15131.7Standard polar33892256
Betrixaban,2TMS,isomer #2COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C13869.0Semi standard non polar33892256
Betrixaban,2TMS,isomer #2COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C13456.0Standard non polar33892256
Betrixaban,2TMS,isomer #2COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C15049.4Standard polar33892256
Betrixaban,2TMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C14072.5Semi standard non polar33892256
Betrixaban,2TMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C13652.0Standard non polar33892256
Betrixaban,2TMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C15190.6Standard polar33892256
Betrixaban,3TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C13729.3Semi standard non polar33892256
Betrixaban,3TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C13488.6Standard non polar33892256
Betrixaban,3TMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C)N(C)C)C=C2)[Si](C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C)=C14703.3Standard polar33892256
Betrixaban,1TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C14410.8Semi standard non polar33892256
Betrixaban,1TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C13864.0Standard non polar33892256
Betrixaban,1TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C15526.1Standard polar33892256
Betrixaban,1TBDMS,isomer #2COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)C(C(=O)NC2=CC=C(Cl)C=N2)=C14542.8Semi standard non polar33892256
Betrixaban,1TBDMS,isomer #2COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)C(C(=O)NC2=CC=C(Cl)C=N2)=C14035.8Standard non polar33892256
Betrixaban,1TBDMS,isomer #2COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)C(C(=O)NC2=CC=C(Cl)C=N2)=C15620.9Standard polar33892256
Betrixaban,1TBDMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C14478.4Semi standard non polar33892256
Betrixaban,1TBDMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C13822.1Standard non polar33892256
Betrixaban,1TBDMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C15573.5Standard polar33892256
Betrixaban,2TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C14404.9Semi standard non polar33892256
Betrixaban,2TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C13993.2Standard non polar33892256
Betrixaban,2TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)NC2=CC=C(Cl)C=N2)=C15071.1Standard polar33892256
Betrixaban,2TBDMS,isomer #2COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C14286.7Semi standard non polar33892256
Betrixaban,2TBDMS,isomer #2COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C13825.9Standard non polar33892256
Betrixaban,2TBDMS,isomer #2COC1=CC=C(N(C(=O)C2=CC=C(C(=N)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C14993.8Standard polar33892256
Betrixaban,2TBDMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C14479.6Semi standard non polar33892256
Betrixaban,2TBDMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C13974.1Standard non polar33892256
Betrixaban,2TBDMS,isomer #3COC1=CC=C(NC(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C15091.5Standard polar33892256
Betrixaban,3TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C14325.5Semi standard non polar33892256
Betrixaban,3TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C13969.9Standard non polar33892256
Betrixaban,3TBDMS,isomer #1COC1=CC=C(N(C(=O)C2=CC=C(C(=N[Si](C)(C)C(C)(C)C)N(C)C)C=C2)[Si](C)(C)C(C)(C)C)C(C(=O)N(C2=CC=C(Cl)C=N2)[Si](C)(C)C(C)(C)C)=C14777.8Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Betrixaban GC-MS (Non-derivatized) - 70eV, Positivesplash10-003r-5932400000-ca5b1912053bbf68c00d2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Betrixaban GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 10V, Positive-QTOFsplash10-0udi-0100900000-218f1daf9d063f6d2e2b2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 20V, Positive-QTOFsplash10-0uk9-0323900000-32aea0536ac5ddc2ebdb2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 40V, Positive-QTOFsplash10-003s-2960000000-a4b2967bfc83276710ed2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 10V, Negative-QTOFsplash10-0udi-0100900000-39e339edbbcfefb037382017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 20V, Negative-QTOFsplash10-0udj-0452900000-4e3df4d92ccfff23f62c2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 40V, Negative-QTOFsplash10-001j-1970000000-2e9a60fbeb6b30196fcf2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 10V, Positive-QTOFsplash10-0udi-0401900000-5ccfa6d71af9e478f9472021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 20V, Positive-QTOFsplash10-0umi-1514900000-d090492326511f0aa1a22021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 40V, Positive-QTOFsplash10-0729-0903100000-037381f459df9435d27a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 10V, Negative-QTOFsplash10-0udi-0220900000-df8761af4bfce4c17f852021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 20V, Negative-QTOFsplash10-0f89-3391300000-72f4281b0be39495d9282021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Betrixaban 40V, Negative-QTOFsplash10-001i-7933100000-c54c123dd03837614d3a2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB12364
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID18981107
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkBetrixaban
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID140421
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]