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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 04:06:40 UTC
Update Date2021-09-26 23:00:35 UTC
HMDB IDHMDB0249595
Secondary Accession NumbersNone
Metabolite Identification
Common NameCapmatinib
DescriptionCapmatinib belongs to the class of organic compounds known as quinolines and derivatives. Quinolines and derivatives are compounds containing a quinoline moiety, which consists of a benzene ring fused to a pyrimidine ring to form benzo[b]azabenzene. Based on a literature review very few articles have been published on Capmatinib. This compound has been identified in human blood as reported by (PMID: 31557052 ). Capmatinib is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Capmatinib is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
INC-280NVP-inc280ChEMBL
2-fluoro-N-Methyl-4-(7-(quinolin-6-yl-methyl)imidazo(1,2-b)(1,2,4)triazin-2-yl)benzamideMeSH
Chemical FormulaC23H17FN6O
Average Molecular Weight412.428
Monoisotopic Molecular Weight412.144787354
IUPAC Name2-fluoro-N-methyl-4-{7-[(quinolin-6-yl)methyl]imidazo[1,2-b][1,2,4]triazin-2-yl}benzamide
Traditional Name2-fluoro-N-methyl-4-[7-(quinolin-6-ylmethyl)imidazo[1,2-b][1,2,4]triazin-2-yl]benzamide
CAS Registry NumberNot Available
SMILES
CNC(=O)C1=CC=C(C=C1F)C1=NN2C(CC3=CC=C4N=CC=CC4=C3)=CN=C2N=C1
InChI Identifier
InChI=1S/C23H17FN6O/c1-25-22(31)18-6-5-16(11-19(18)24)21-13-28-23-27-12-17(30(23)29-21)10-14-4-7-20-15(9-14)3-2-8-26-20/h2-9,11-13H,10H2,1H3,(H,25,31)
InChI KeyLIOLIMKSCNQPLV-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as quinolines and derivatives. Quinolines and derivatives are compounds containing a quinoline moiety, which consists of a benzene ring fused to a pyrimidine ring to form benzo[b]azabenzene.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassQuinolines and derivatives
Sub ClassNot Available
Direct ParentQuinolines and derivatives
Alternative Parents
Substituents
  • Quinoline
  • 2-halobenzoic acid or derivatives
  • Halobenzoic acid or derivatives
  • Imidazo[1,2-a][1,2,4]triazine
  • Benzamide
  • Benzoic acid or derivatives
  • Benzoyl
  • Halobenzene
  • Fluorobenzene
  • N-substituted imidazole
  • Aryl fluoride
  • Aryl halide
  • Pyridine
  • Benzenoid
  • 1,2,4-triazine
  • Triazine
  • Monocyclic benzene moiety
  • Imidazole
  • Heteroaromatic compound
  • Vinylogous halide
  • Azole
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Carboxylic acid derivative
  • Azacycle
  • Organonitrogen compound
  • Organic nitrogen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Organofluoride
  • Organohalogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.04ALOGPS
logP2.96ChemAxon
logS-4.9ALOGPS
pKa (Strongest Acidic)12.77ChemAxon
pKa (Strongest Basic)4.55ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area85.07 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity125.27 m³·mol⁻¹ChemAxon
Polarizability42.1 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+197.30830932474
DeepCCS[M-H]-194.9530932474
DeepCCS[M-2H]-228.35230932474
DeepCCS[M+Na]+203.5830932474
AllCCS[M+H]+199.232859911
AllCCS[M+H-H2O]+196.632859911
AllCCS[M+NH4]+201.632859911
AllCCS[M+Na]+202.332859911
AllCCS[M-H]-197.432859911
AllCCS[M+Na-2H]-197.032859911
AllCCS[M+HCOO]-196.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CapmatinibCNC(=O)C1=CC=C(C=C1F)C1=NN2C(CC3=CC=C4N=CC=CC4=C3)=CN=C2N=C14795.8Standard polar33892256
CapmatinibCNC(=O)C1=CC=C(C=C1F)C1=NN2C(CC3=CC=C4N=CC=CC4=C3)=CN=C2N=C13857.7Standard non polar33892256
CapmatinibCNC(=O)C1=CC=C(C=C1F)C1=NN2C(CC3=CC=C4N=CC=CC4=C3)=CN=C2N=C14445.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Capmatinib,1TMS,isomer #1CN(C(=O)C1=CC=C(C2=NN3C(CC4=CC=C5N=CC=CC5=C4)=CN=C3N=C2)C=C1F)[Si](C)(C)C4127.4Semi standard non polar33892256
Capmatinib,1TMS,isomer #1CN(C(=O)C1=CC=C(C2=NN3C(CC4=CC=C5N=CC=CC5=C4)=CN=C3N=C2)C=C1F)[Si](C)(C)C4046.7Standard non polar33892256
Capmatinib,1TMS,isomer #1CN(C(=O)C1=CC=C(C2=NN3C(CC4=CC=C5N=CC=CC5=C4)=CN=C3N=C2)C=C1F)[Si](C)(C)C5209.9Standard polar33892256
Capmatinib,1TBDMS,isomer #1CN(C(=O)C1=CC=C(C2=NN3C(CC4=CC=C5N=CC=CC5=C4)=CN=C3N=C2)C=C1F)[Si](C)(C)C(C)(C)C4346.2Semi standard non polar33892256
Capmatinib,1TBDMS,isomer #1CN(C(=O)C1=CC=C(C2=NN3C(CC4=CC=C5N=CC=CC5=C4)=CN=C3N=C2)C=C1F)[Si](C)(C)C(C)(C)C4231.1Standard non polar33892256
Capmatinib,1TBDMS,isomer #1CN(C(=O)C1=CC=C(C2=NN3C(CC4=CC=C5N=CC=CC5=C4)=CN=C3N=C2)C=C1F)[Si](C)(C)C(C)(C)C5240.0Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Capmatinib GC-MS (Non-derivatized) - 70eV, Positivesplash10-001i-1809000000-d62f7a3b9d4a5fbb45b12021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Capmatinib GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 10V, Positive-QTOFsplash10-03di-0001900000-0cc6d4d4bc96a5d46f542017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 20V, Positive-QTOFsplash10-03di-0107900000-425c737fbedbcd8bc5ad2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 40V, Positive-QTOFsplash10-004i-1912000000-79e16910c22603b36cce2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 10V, Negative-QTOFsplash10-03di-0001900000-8ac0b88435e7f5e1f1672017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 20V, Negative-QTOFsplash10-03di-2056900000-1b386b29b4bf02fd6ab32017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 40V, Negative-QTOFsplash10-0pdi-7469000000-82eb0ed7ecfee504acfa2017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 10V, Positive-QTOFsplash10-03di-0003900000-d9aa53ade067433bbf932021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 20V, Positive-QTOFsplash10-001i-0009200000-b9682800f486c3b7c4b52021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 40V, Positive-QTOFsplash10-0pvl-0739000000-bf6e990134c6a304b8972021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 10V, Negative-QTOFsplash10-03di-0004900000-0c20e40b9710bc4c99be2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 20V, Negative-QTOFsplash10-0gvx-0009200000-e3076d5dd4287363d8c52021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Capmatinib 40V, Negative-QTOFsplash10-0ufr-0951000000-d57ae80d4509ee03e2372021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB11791
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID25069712
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkCapmatinib
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]