Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 06:36:47 UTC
Update Date2021-09-26 23:00:49 UTC
HMDB IDHMDB0249756
Secondary Accession NumbersNone
Metabolite Identification
Common NameCefcanel daloxate
Description2-[(2-aminopropanoyl)oxy]-N-(3-{[(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-2-{[(5-methyl-2-oxo-2H-1,3-dioxol-4-yl)methoxy]carbonyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-en-7-yl)-2-phenylethanimidic acid belongs to the class of organic compounds known as cephalosporins. Cephalosporins are compounds containing a 1,2-thiazine fused to a 2-azetidinone to for a oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid moiety or a derivative thereof. Based on a literature review very few articles have been published on 2-[(2-aminopropanoyl)oxy]-N-(3-{[(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-2-{[(5-methyl-2-oxo-2H-1,3-dioxol-4-yl)methoxy]carbonyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-en-7-yl)-2-phenylethanimidic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). Cefcanel daloxate is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Cefcanel daloxate is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
2-[(2-Aminopropanoyl)oxy]-N-(3-{[(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-2-{[(5-methyl-2-oxo-2H-1,3-dioxol-4-yl)methoxy]carbonyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-en-7-yl)-2-phenylethanimidateGenerator
2-[(2-Aminopropanoyl)oxy]-N-(3-{[(5-methyl-1,3,4-thiadiazol-2-yl)sulphanyl]methyl}-2-{[(5-methyl-2-oxo-2H-1,3-dioxol-4-yl)methoxy]carbonyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-en-7-yl)-2-phenylethanimidateGenerator
2-[(2-Aminopropanoyl)oxy]-N-(3-{[(5-methyl-1,3,4-thiadiazol-2-yl)sulphanyl]methyl}-2-{[(5-methyl-2-oxo-2H-1,3-dioxol-4-yl)methoxy]carbonyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-en-7-yl)-2-phenylethanimidic acidGenerator
Cefcanel daloxic acidGenerator
(5-Methyl-2-oxo-1,3-dioxol-4-yl)methyl-7(O-(alanyl)mandelamido)-3-((5-methyl-1,3,4-thiadiazol-2-yl)thio)methyl-3-cephem-4-carboxylate hydrochlorideMeSH
Chemical FormulaC27H27N5O9S3
Average Molecular Weight661.72
Monoisotopic Molecular Weight661.097090991
IUPAC Name(5-methyl-2-oxo-2H-1,3-dioxol-4-yl)methyl 7-{2-[(2-aminopropanoyl)oxy]-2-phenylacetamido}-3-{[(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylate
Traditional Name(5-methyl-2-oxo-1,3-dioxol-4-yl)methyl 7-{2-[(2-aminopropanoyl)oxy]-2-phenylacetamido}-3-{[(5-methyl-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylate
CAS Registry NumberNot Available
SMILES
CC(N)C(=O)OC(C(=O)NC1C2SCC(CSC3=NN=C(C)S3)=C(N2C1=O)C(=O)OCC1=C(C)OC(=O)O1)C1=CC=CC=C1
InChI Identifier
InChI=1S/C27H27N5O9S3/c1-12(28)24(35)41-20(15-7-5-4-6-8-15)21(33)29-18-22(34)32-19(25(36)38-9-17-13(2)39-27(37)40-17)16(10-42-23(18)32)11-43-26-31-30-14(3)44-26/h4-8,12,18,20,23H,9-11,28H2,1-3H3,(H,29,33)
InChI KeyAMMYEZPDRKXESR-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cephalosporins. Cephalosporins are compounds containing a 1,2-thiazine fused to a 2-azetidinone to for a oxo-5-thia-1-azabicyclo[4.2.0]Oct-2-ene-2-carboxylic acid moiety or a derivative thereof.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassLactams
Sub ClassBeta lactams
Direct ParentCephalosporins
Alternative Parents
Substituents
  • Cephalosporin
  • Alpha-amino acid ester
  • N-acyl-alpha amino acid or derivatives
  • Alanine or derivatives
  • Alpha-amino acid or derivatives
  • Benzyloxycarbonyl
  • Phenylacetamide
  • Aryl thioether
  • Alkylarylthioether
  • Meta-thiazine
  • Dicarboxylic acid or derivatives
  • Carbonic acid diester
  • Monocyclic benzene moiety
  • Benzenoid
  • Alpha,beta-unsaturated carboxylic ester
  • Azole
  • Tertiary carboxylic acid amide
  • Thiadiazole
  • Heteroaromatic compound
  • Enoate ester
  • Secondary carboxylic acid amide
  • Carboxylic acid ester
  • Azetidine
  • Carboxamide group
  • Amino acid or derivatives
  • Dialkylthioether
  • Oxacycle
  • Carboxylic acid derivative
  • Thioether
  • Hemithioaminal
  • Sulfenyl compound
  • Azacycle
  • Organic nitrogen compound
  • Primary aliphatic amine
  • Carbonyl group
  • Organonitrogen compound
  • Organooxygen compound
  • Organosulfur compound
  • Primary amine
  • Hydrocarbon derivative
  • Organic oxide
  • Amine
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.33ALOGPS
logP1.62ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)11.14ChemAxon
pKa (Strongest Basic)7.04ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area189.34 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity162.08 m³·mol⁻¹ChemAxon
Polarizability64.07 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+237.80530932474
DeepCCS[M-H]-235.4830932474
DeepCCS[M-2H]-268.4430932474
DeepCCS[M+Na]+243.54630932474
AllCCS[M+H]+237.132859911
AllCCS[M+H-H2O]+236.532859911
AllCCS[M+NH4]+237.732859911
AllCCS[M+Na]+237.932859911
AllCCS[M-H]-217.132859911
AllCCS[M+Na-2H]-219.132859911
AllCCS[M+HCOO]-221.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Cefcanel daloxateCC(N)C(=O)OC(C(=O)NC1C2SCC(CSC3=NN=C(C)S3)=C(N2C1=O)C(=O)OCC1=C(C)OC(=O)O1)C1=CC=CC=C15912.0Standard polar33892256
Cefcanel daloxateCC(N)C(=O)OC(C(=O)NC1C2SCC(CSC3=NN=C(C)S3)=C(N2C1=O)C(=O)OCC1=C(C)OC(=O)O1)C1=CC=CC=C14164.5Standard non polar33892256
Cefcanel daloxateCC(N)C(=O)OC(C(=O)NC1C2SCC(CSC3=NN=C(C)S3)=C(N2C1=O)C(=O)OCC1=C(C)OC(=O)O1)C1=CC=CC=C15118.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cefcanel daloxate,1TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N[Si](C)(C)C)C4=CC=CC=C4)C3SC2)S15348.1Semi standard non polar33892256
Cefcanel daloxate,1TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N[Si](C)(C)C)C4=CC=CC=C4)C3SC2)S14445.1Standard non polar33892256
Cefcanel daloxate,1TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N[Si](C)(C)C)C4=CC=CC=C4)C3SC2)S17861.4Standard polar33892256
Cefcanel daloxate,1TMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S15128.9Semi standard non polar33892256
Cefcanel daloxate,1TMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S14380.7Standard non polar33892256
Cefcanel daloxate,1TMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S18264.1Standard polar33892256
Cefcanel daloxate,2TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N[Si](C)(C)C)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S15130.8Semi standard non polar33892256
Cefcanel daloxate,2TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N[Si](C)(C)C)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S14447.7Standard non polar33892256
Cefcanel daloxate,2TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N[Si](C)(C)C)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S17207.0Standard polar33892256
Cefcanel daloxate,2TMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N([Si](C)(C)C)[Si](C)(C)C)C4=CC=CC=C4)C3SC2)S15306.8Semi standard non polar33892256
Cefcanel daloxate,2TMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N([Si](C)(C)C)[Si](C)(C)C)C4=CC=CC=C4)C3SC2)S14483.4Standard non polar33892256
Cefcanel daloxate,2TMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N([Si](C)(C)C)[Si](C)(C)C)C4=CC=CC=C4)C3SC2)S17526.2Standard polar33892256
Cefcanel daloxate,3TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N([Si](C)(C)C)[Si](C)(C)C)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S15140.9Semi standard non polar33892256
Cefcanel daloxate,3TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N([Si](C)(C)C)[Si](C)(C)C)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S14522.6Standard non polar33892256
Cefcanel daloxate,3TMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N([Si](C)(C)C)[Si](C)(C)C)C4=CC=CC=C4)[Si](C)(C)C)C3SC2)S16897.3Standard polar33892256
Cefcanel daloxate,1TBDMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)C3SC2)S15490.3Semi standard non polar33892256
Cefcanel daloxate,1TBDMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)C3SC2)S14576.2Standard non polar33892256
Cefcanel daloxate,1TBDMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)C3SC2)S17765.4Standard polar33892256
Cefcanel daloxate,1TBDMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N)C4=CC=CC=C4)[Si](C)(C)C(C)(C)C)C3SC2)S15319.5Semi standard non polar33892256
Cefcanel daloxate,1TBDMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N)C4=CC=CC=C4)[Si](C)(C)C(C)(C)C)C3SC2)S14548.5Standard non polar33892256
Cefcanel daloxate,1TBDMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N)C4=CC=CC=C4)[Si](C)(C)C(C)(C)C)C3SC2)S18133.7Standard polar33892256
Cefcanel daloxate,2TBDMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)[Si](C)(C)C(C)(C)C)C3SC2)S15437.5Semi standard non polar33892256
Cefcanel daloxate,2TBDMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)[Si](C)(C)C(C)(C)C)C3SC2)S14758.4Standard non polar33892256
Cefcanel daloxate,2TBDMS,isomer #1CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(N(C(=O)C(OC(=O)C(C)N[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)[Si](C)(C)C(C)(C)C)C3SC2)S17112.3Standard polar33892256
Cefcanel daloxate,2TBDMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)C3SC2)S15602.8Semi standard non polar33892256
Cefcanel daloxate,2TBDMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)C3SC2)S14789.5Standard non polar33892256
Cefcanel daloxate,2TBDMS,isomer #2CC1=NN=C(SCC2=C(C(=O)OCC3=C(C)OC(=O)O3)N3C(=O)C(NC(=O)C(OC(=O)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)C4=CC=CC=C4)C3SC2)S17360.8Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cefcanel daloxate 10V, Positive-QTOFsplash10-03ec-1212739000-c2777be4fc4836db4b902021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cefcanel daloxate 20V, Positive-QTOFsplash10-022c-3502950000-542a8e2c0b937b7d3faa2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cefcanel daloxate 40V, Positive-QTOFsplash10-03dl-7731941000-c5895f9d729621a1e46d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cefcanel daloxate 10V, Negative-QTOFsplash10-03fr-1190006000-cc68e284c6ddd0648acc2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cefcanel daloxate 20V, Negative-QTOFsplash10-00as-9400101000-aedc51e88d4789bd21122021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cefcanel daloxate 40V, Negative-QTOFsplash10-003v-9400000000-2b4e41cdb76c162750852021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID59260
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound65848
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]