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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:07:13 UTC
Update Date2021-09-26 23:01:26 UTC
HMDB IDHMDB0250145
Secondary Accession NumbersNone
Metabolite Identification
Common NameChlorthiamid
Description2,6-dichlorobenzene-1-carboimidothioic acid, also known as 2,6-dichlorothiobenzamide, belongs to the class of organic compounds known as dichlorobenzenes. Dichlorobenzenes are compounds containing a benzene with exactly two chlorine atoms attached to it. 2,6-dichlorobenzene-1-carboimidothioic acid is a very strong basic compound (based on its pKa). This compound has been identified in human blood as reported by (PMID: 31557052 ). Chlorthiamid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Chlorthiamid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
2,6-DichlorothiobenzamideKegg
2,6-Dichlorobenzene-1-carboimidothioateGenerator
DCTBAMeSH
Chemical FormulaC7H5Cl2NS
Average Molecular Weight206.08
Monoisotopic Molecular Weight204.9519757
IUPAC Name2,6-dichlorobenzene-1-carboimidothioic acid
Traditional Namechlorthiamid
CAS Registry NumberNot Available
SMILES
SC(=N)C1=C(Cl)C=CC=C1Cl
InChI Identifier
InChI=1S/C7H5Cl2NS/c8-4-2-1-3-5(9)6(4)7(10)11/h1-3H,(H2,10,11)
InChI KeyKGKGSIUWJCAFPX-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dichlorobenzenes. Dichlorobenzenes are compounds containing a benzene with exactly two chlorine atoms attached to it.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassHalobenzenes
Direct ParentDichlorobenzenes
Alternative Parents
Substituents
  • 1,3-dichlorobenzene
  • Aryl halide
  • Aryl chloride
  • Imidothioic acid or derivatives
  • Alkylthiol
  • Organic nitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organosulfur compound
  • Organonitrogen compound
  • Organochloride
  • Organohalogen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.58ALOGPS
logP3.37ChemAxon
logS-4.4ALOGPS
pKa (Strongest Basic)5.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area23.85 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity61.81 m³·mol⁻¹ChemAxon
Polarizability18.66 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+140.12830932474
DeepCCS[M-H]-137.08630932474
DeepCCS[M-2H]-173.58130932474
DeepCCS[M+Na]+149.11930932474
AllCCS[M+H]+137.332859911
AllCCS[M+H-H2O]+133.132859911
AllCCS[M+NH4]+141.232859911
AllCCS[M+Na]+142.332859911
AllCCS[M-H]-129.032859911
AllCCS[M+Na-2H]-130.332859911
AllCCS[M+HCOO]-131.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ChlorthiamidSC(=N)C1=C(Cl)C=CC=C1Cl2689.3Standard polar33892256
ChlorthiamidSC(=N)C1=C(Cl)C=CC=C1Cl1784.0Standard non polar33892256
ChlorthiamidSC(=N)C1=C(Cl)C=CC=C1Cl1856.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Chlorthiamid,1TMS,isomer #1C[Si](C)(C)SC(=N)C1=C(Cl)C=CC=C1Cl1860.1Semi standard non polar33892256
Chlorthiamid,1TMS,isomer #1C[Si](C)(C)SC(=N)C1=C(Cl)C=CC=C1Cl1688.4Standard non polar33892256
Chlorthiamid,1TMS,isomer #1C[Si](C)(C)SC(=N)C1=C(Cl)C=CC=C1Cl2500.7Standard polar33892256
Chlorthiamid,1TMS,isomer #2C[Si](C)(C)N=C(S)C1=C(Cl)C=CC=C1Cl1759.3Semi standard non polar33892256
Chlorthiamid,1TMS,isomer #2C[Si](C)(C)N=C(S)C1=C(Cl)C=CC=C1Cl1635.9Standard non polar33892256
Chlorthiamid,1TMS,isomer #2C[Si](C)(C)N=C(S)C1=C(Cl)C=CC=C1Cl2294.8Standard polar33892256
Chlorthiamid,2TMS,isomer #1C[Si](C)(C)N=C(S[Si](C)(C)C)C1=C(Cl)C=CC=C1Cl1744.1Semi standard non polar33892256
Chlorthiamid,2TMS,isomer #1C[Si](C)(C)N=C(S[Si](C)(C)C)C1=C(Cl)C=CC=C1Cl1708.0Standard non polar33892256
Chlorthiamid,2TMS,isomer #1C[Si](C)(C)N=C(S[Si](C)(C)C)C1=C(Cl)C=CC=C1Cl2117.7Standard polar33892256
Chlorthiamid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)SC(=N)C1=C(Cl)C=CC=C1Cl2107.8Semi standard non polar33892256
Chlorthiamid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)SC(=N)C1=C(Cl)C=CC=C1Cl1941.8Standard non polar33892256
Chlorthiamid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)SC(=N)C1=C(Cl)C=CC=C1Cl2484.6Standard polar33892256
Chlorthiamid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N=C(S)C1=C(Cl)C=CC=C1Cl1979.3Semi standard non polar33892256
Chlorthiamid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N=C(S)C1=C(Cl)C=CC=C1Cl1851.5Standard non polar33892256
Chlorthiamid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N=C(S)C1=C(Cl)C=CC=C1Cl2391.6Standard polar33892256
Chlorthiamid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N=C(S[Si](C)(C)C(C)(C)C)C1=C(Cl)C=CC=C1Cl2276.7Semi standard non polar33892256
Chlorthiamid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N=C(S[Si](C)(C)C(C)(C)C)C1=C(Cl)C=CC=C1Cl2071.2Standard non polar33892256
Chlorthiamid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)N=C(S[Si](C)(C)C(C)(C)C)C1=C(Cl)C=CC=C1Cl2304.6Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Chlorthiamid GC-MS (Non-derivatized) - 70eV, Positivesplash10-00di-4920000000-a2d7c60f2550d123e1342021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Chlorthiamid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Chlorthiamid 30V, Negative-QTOFsplash10-0a4i-9000000000-4e4d8ec8c33d33c6fcff2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Chlorthiamid 15V, Negative-QTOFsplash10-0a4i-9010000000-34416773104efb7b41082021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Chlorthiamid 45V, Negative-QTOFsplash10-0a4i-9000000000-d39932a161e07c3755262021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Chlorthiamid 60V, Negative-QTOFsplash10-0a4i-9000000000-e858eafc5134f3cf550e2021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 10V, Positive-QTOFsplash10-000i-0900000000-a6714d0ad824fe4a93bc2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 20V, Positive-QTOFsplash10-000i-0900000000-ca0e57c4b84b03a85b302016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 40V, Positive-QTOFsplash10-000i-0900000000-4c584b8a80fad905b8c62016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 10V, Negative-QTOFsplash10-0uxr-0950000000-507df131bc4c5fb28bec2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 20V, Negative-QTOFsplash10-0uxr-2980000000-a3beace43ba3b2a6c96b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 40V, Negative-QTOFsplash10-0a5i-9700000000-4ab0f19837ed8477d80b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 10V, Positive-QTOFsplash10-0a4i-0090000000-65d2ed8b9b258b29575b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 20V, Positive-QTOFsplash10-0a4i-0390000000-6dfc08eb04c7bf1dc2b92021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 40V, Positive-QTOFsplash10-059i-0910000000-16ca977ce25c0757839b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 10V, Negative-QTOFsplash10-014i-0920000000-db1a96e65f62c94d08552021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 20V, Negative-QTOFsplash10-0a4i-9310000000-934fa28bc0ac6101711a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chlorthiamid 40V, Negative-QTOFsplash10-0a59-9000000000-e77ebedec5b9e6f0c2ab2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDC11041
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound15968
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]