Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 07:10:09 UTC
Update Date2021-09-26 23:01:31 UTC
HMDB IDHMDB0250187
Secondary Accession NumbersNone
Metabolite Identification
Common NameCholesteryl hemisuccinate
Description4-(Cholest-5-en-3-yloxy)-4-oxobutanoic acid belongs to the class of organic compounds known as cholesteryl esters. Cholesteryl esters are compounds containing an esterified cholestane moiety. Based on a literature review very few articles have been published on 4-(Cholest-5-en-3-yloxy)-4-oxobutanoic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). Cholesteryl hemisuccinate is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Cholesteryl hemisuccinate is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
4-(Cholest-5-en-3-yloxy)-4-oxobutanoateGenerator
Cholesteryl hemisuccinic acidGenerator
4-{[2,15-dimethyl-14-(6-methylheptan-2-yl)tetracyclo[8.7.0.0,.0,]heptadec-7-en-5-yl]oxy}-4-oxobutanoateGenerator
Chemical FormulaC31H50O4
Average Molecular Weight486.737
Monoisotopic Molecular Weight486.37091009
IUPAC Name4-{[2,15-dimethyl-14-(6-methylheptan-2-yl)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-en-5-yl]oxy}-4-oxobutanoic acid
Traditional Name4-{[2,15-dimethyl-14-(6-methylheptan-2-yl)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-en-5-yl]oxy}-4-oxobutanoic acid
CAS Registry NumberNot Available
SMILES
CC(C)CCCC(C)C1CCC2C3CC=C4CC(CCC4(C)C3CCC12C)OC(=O)CCC(O)=O
InChI Identifier
InChI=1S/C31H50O4/c1-20(2)7-6-8-21(3)25-11-12-26-24-10-9-22-19-23(35-29(34)14-13-28(32)33)15-17-30(22,4)27(24)16-18-31(25,26)5/h9,20-21,23-27H,6-8,10-19H2,1-5H3,(H,32,33)
InChI KeyWLNARFZDISHUGS-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cholesteryl esters. Cholesteryl esters are compounds containing an esterified cholestane moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassSteroid esters
Direct ParentCholesteryl esters
Alternative Parents
Substituents
  • Cholesteryl ester
  • Cholesterol
  • Cholestane-skeleton
  • Delta-5-steroid
  • Dicarboxylic acid or derivatives
  • Carboxylic acid ester
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP7.02ALOGPS
logP7.38ChemAxon
logS-7.2ALOGPS
pKa (Strongest Acidic)4.07ChemAxon
pKa (Strongest Basic)-7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area63.6 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity140.66 m³·mol⁻¹ChemAxon
Polarizability59.42 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-257.89230932474
DeepCCS[M+Na]+233.12130932474
AllCCS[M+H]+224.632859911
AllCCS[M+H-H2O]+223.132859911
AllCCS[M+NH4]+225.832859911
AllCCS[M+Na]+226.232859911
AllCCS[M-H]-212.132859911
AllCCS[M+Na-2H]-215.032859911
AllCCS[M+HCOO]-218.532859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cholesteryl hemisuccinate,1TMS,isomer #1CC(C)CCCC(C)C1CCC2C3CC=C4CC(OC(=O)CCC(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C3754.6Semi standard non polar33892256
Cholesteryl hemisuccinate,1TMS,isomer #1CC(C)CCCC(C)C1CCC2C3CC=C4CC(OC(=O)CCC(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C3711.4Standard non polar33892256
Cholesteryl hemisuccinate,1TMS,isomer #1CC(C)CCCC(C)C1CCC2C3CC=C4CC(OC(=O)CCC(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C4265.8Standard polar33892256
Cholesteryl hemisuccinate,1TBDMS,isomer #1CC(C)CCCC(C)C1CCC2C3CC=C4CC(OC(=O)CCC(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C4004.7Semi standard non polar33892256
Cholesteryl hemisuccinate,1TBDMS,isomer #1CC(C)CCCC(C)C1CCC2C3CC=C4CC(OC(=O)CCC(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C3963.6Standard non polar33892256
Cholesteryl hemisuccinate,1TBDMS,isomer #1CC(C)CCCC(C)C1CCC2C3CC=C4CC(OC(=O)CCC(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C4367.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cholesteryl hemisuccinate GC-MS (Non-derivatized) - 70eV, Positivesplash10-00di-5009600000-fc7720fc3c494a6654902021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cholesteryl hemisuccinate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cholesteryl hemisuccinate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cholesteryl hemisuccinate 10V, Negative-QTOFsplash10-000i-2004900000-144a9756a561be00c3012021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cholesteryl hemisuccinate 20V, Negative-QTOFsplash10-05tr-8009100000-3c71f682e093207bbf3a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cholesteryl hemisuccinate 40V, Negative-QTOFsplash10-0ab9-9000000000-fcff9ecbeb0747e92a8e2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cholesteryl hemisuccinate 10V, Positive-QTOFsplash10-014i-0039200000-713ab08b02fdcfaae1e42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cholesteryl hemisuccinate 20V, Positive-QTOFsplash10-0a4i-9048200000-09840de9b97b0e933d742021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cholesteryl hemisuccinate 40V, Positive-QTOFsplash10-0a4i-9671000000-ee941bdfa047f7426af22021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID437457
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound500055
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]