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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 08:23:37 UTC
Update Date2021-09-26 23:02:54 UTC
HMDB IDHMDB0251090
Secondary Accession NumbersNone
Metabolite Identification
Common NameDexniguldipine
DescriptionNIGULDIPINE, also known as dexniguldipine or DNIG, belongs to the class of organic compounds known as diphenylmethanes. Diphenylmethanes are compounds containing a diphenylmethane moiety, which consists of a methane wherein two hydrogen atoms are replaced by two phenyl groups. Based on a literature review a significant number of articles have been published on NIGULDIPINE. This compound has been identified in human blood as reported by (PMID: 31557052 ). Dexniguldipine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Dexniguldipine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
DexniguldipineKegg
3-((4,4-Diphenyl-1-piperidinyl)propyl)-5-methyl-1,4-dihydro-2,6-dimethyl-4-(3-nitrophenyl)pyridine-3,5-dicarboxylate hydrochlorideMeSH
3-Methyl-5-(3-(4,4-diphenyl-1-piperidinyl)propyl)-1,4-dihydro-2,6-dimethyl-4-(3-nitrophenyl)pyridine-3,5-dicarboxylateMeSH
DNIGMeSH
Niguldipine fumarateMeSH
Niguldipine hydrobromideMeSH
Niguldipine hydrochlorideMeSH
Niguldipine maleateMeSH
Chemical FormulaC36H39N3O6
Average Molecular Weight609.723
Monoisotopic Molecular Weight609.283885988
IUPAC Name3-[3-(4,4-diphenylpiperidin-1-yl)propyl] 5-methyl 2,6-dimethyl-4-(3-nitrophenyl)-1,4-dihydropyridine-3,5-dicarboxylate
Traditional Nameniguldipine
CAS Registry NumberNot Available
SMILES
COC(=O)C1=C(C)NC(C)=C(C1C1=CC=CC(=C1)[N+]([O-])=O)C(=O)OCCCN1CCC(CC1)(C1=CC=CC=C1)C1=CC=CC=C1
InChI Identifier
InChI=1S/C36H39N3O6/c1-25-31(34(40)44-3)33(27-12-10-17-30(24-27)39(42)43)32(26(2)37-25)35(41)45-23-11-20-38-21-18-36(19-22-38,28-13-6-4-7-14-28)29-15-8-5-9-16-29/h4-10,12-17,24,33,37H,11,18-23H2,1-3H3
InChI KeySVJMLYUFVDMUHP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diphenylmethanes. Diphenylmethanes are compounds containing a diphenylmethane moiety, which consists of a methane wherein two hydrogen atoms are replaced by two phenyl groups.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassDiphenylmethanes
Direct ParentDiphenylmethanes
Alternative Parents
Substituents
  • Diphenylmethane
  • Phenylpiperidine
  • Nitrobenzene
  • Dihydropyridinecarboxylic acid derivative
  • Nitroaromatic compound
  • Aralkylamine
  • Dihydropyridine
  • Piperidine
  • Hydropyridine
  • Dicarboxylic acid or derivatives
  • Vinylogous amide
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Methyl ester
  • C-nitro compound
  • Carboxylic acid ester
  • Amino acid or derivatives
  • Tertiary amine
  • Tertiary aliphatic amine
  • Organic nitro compound
  • Carboxylic acid derivative
  • Secondary aliphatic amine
  • Azacycle
  • Enamine
  • Organoheterocyclic compound
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Organic oxoazanium
  • Allyl-type 1,3-dipolar organic compound
  • Secondary amine
  • Carbonyl group
  • Amine
  • Organic oxygen compound
  • Organic nitrogen compound
  • Organopnictogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP6.27ALOGPS
logP5.6ChemAxon
logS-6.7ALOGPS
pKa (Strongest Acidic)19.47ChemAxon
pKa (Strongest Basic)9.59ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area111.01 ŲChemAxon
Rotatable Bond Count12ChemAxon
Refractivity185.9 m³·mol⁻¹ChemAxon
Polarizability66.16 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+217.3430932474
DeepCCS[M-H]-215.48330932474
DeepCCS[M-2H]-248.72230932474
DeepCCS[M+Na]+223.0830932474
AllCCS[M+H]+245.532859911
AllCCS[M+H-H2O]+244.332859911
AllCCS[M+NH4]+246.532859911
AllCCS[M+Na]+246.832859911
AllCCS[M-H]-232.032859911
AllCCS[M+Na-2H]-234.032859911
AllCCS[M+HCOO]-236.332859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Dexniguldipine,1TMS,isomer #1COC(=O)C1=C(C)N([Si](C)(C)C)C(C)=C(C(=O)OCCCN2CCC(C3=CC=CC=C3)(C3=CC=CC=C3)CC2)C1C1=CC=CC([N+](=O)[O-])=C14623.2Semi standard non polar33892256
Dexniguldipine,1TMS,isomer #1COC(=O)C1=C(C)N([Si](C)(C)C)C(C)=C(C(=O)OCCCN2CCC(C3=CC=CC=C3)(C3=CC=CC=C3)CC2)C1C1=CC=CC([N+](=O)[O-])=C14212.3Standard non polar33892256
Dexniguldipine,1TMS,isomer #1COC(=O)C1=C(C)N([Si](C)(C)C)C(C)=C(C(=O)OCCCN2CCC(C3=CC=CC=C3)(C3=CC=CC=C3)CC2)C1C1=CC=CC([N+](=O)[O-])=C15773.8Standard polar33892256
Dexniguldipine,1TBDMS,isomer #1COC(=O)C1=C(C)N([Si](C)(C)C(C)(C)C)C(C)=C(C(=O)OCCCN2CCC(C3=CC=CC=C3)(C3=CC=CC=C3)CC2)C1C1=CC=CC([N+](=O)[O-])=C14794.8Semi standard non polar33892256
Dexniguldipine,1TBDMS,isomer #1COC(=O)C1=C(C)N([Si](C)(C)C(C)(C)C)C(C)=C(C(=O)OCCCN2CCC(C3=CC=CC=C3)(C3=CC=CC=C3)CC2)C1C1=CC=CC([N+](=O)[O-])=C14548.5Standard non polar33892256
Dexniguldipine,1TBDMS,isomer #1COC(=O)C1=C(C)N([Si](C)(C)C(C)(C)C)C(C)=C(C(=O)OCCCN2CCC(C3=CC=CC=C3)(C3=CC=CC=C3)CC2)C1C1=CC=CC([N+](=O)[O-])=C15737.6Standard polar33892256
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID1199
KEGG Compound IDC11236
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound1236
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]