Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 08:26:44 UTC
Update Date2021-09-26 23:02:59 UTC
HMDB IDHMDB0251140
Secondary Accession NumbersNone
Metabolite Identification
Common NameDianhydrodulcitol
Description1,2-bis(oxiran-2-yl)ethane-1,2-diol belongs to the class of organic compounds known as 1,2-diols. These are polyols containing an alcohol group at two adjacent positions. Based on a literature review very few articles have been published on 1,2-bis(oxiran-2-yl)ethane-1,2-diol. This compound has been identified in human blood as reported by (PMID: 31557052 ). Dianhydrodulcitol is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Dianhydrodulcitol is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
1,2,5,6-DianhydrogalactitolMeSH
1,2-5,6-DianhydrogalactitolMeSH
DianhydrogalactitolMeSH
DiepoxydulcitolMeSH
DiepoxygalactitolMeSH
Chemical FormulaC6H10O4
Average Molecular Weight146.142
Monoisotopic Molecular Weight146.057908802
IUPAC Name1,2-bis(oxiran-2-yl)ethane-1,2-diol
Traditional Name1,2:5,6-dianhydrogalactitol
CAS Registry NumberNot Available
SMILES
OC(C(O)C1CO1)C1CO1
InChI Identifier
InChI=1S/C6H10O4/c7-5(3-1-9-3)6(8)4-2-10-4/h3-8H,1-2H2
InChI KeyAAFJXZWCNVJTMK-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 1,2-diols. These are polyols containing an alcohol group at two adjacent positions.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassAlcohols and polyols
Direct Parent1,2-diols
Alternative Parents
Substituents
  • Secondary alcohol
  • 1,2-diol
  • Oxacycle
  • Organoheterocyclic compound
  • Ether
  • Oxirane
  • Dialkyl ether
  • Hydrocarbon derivative
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-1.4ALOGPS
logP-1.4ChemAxon
logS0.84ALOGPS
pKa (Strongest Acidic)12.77ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area62.22 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity31.38 m³·mol⁻¹ChemAxon
Polarizability13.72 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+129.60430932474
DeepCCS[M-H]-126.84930932474
DeepCCS[M-2H]-163.47730932474
DeepCCS[M+Na]+138.50630932474
AllCCS[M+H]+132.732859911
AllCCS[M+H-H2O]+127.932859911
AllCCS[M+NH4]+137.032859911
AllCCS[M+Na]+138.332859911
AllCCS[M-H]-126.932859911
AllCCS[M+Na-2H]-128.132859911
AllCCS[M+HCOO]-129.532859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Dianhydrodulcitol,1TMS,isomer #1C[Si](C)(C)OC(C1CO1)C(O)C1CO11345.5Semi standard non polar33892256
Dianhydrodulcitol,1TMS,isomer #1C[Si](C)(C)OC(C1CO1)C(O)C1CO11297.5Standard non polar33892256
Dianhydrodulcitol,1TMS,isomer #1C[Si](C)(C)OC(C1CO1)C(O)C1CO12012.8Standard polar33892256
Dianhydrodulcitol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C1CO1)C(O)C1CO11564.4Semi standard non polar33892256
Dianhydrodulcitol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C1CO1)C(O)C1CO11515.4Standard non polar33892256
Dianhydrodulcitol,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C1CO1)C(O)C1CO12123.5Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Dianhydrodulcitol GC-MS (Non-derivatized) - 70eV, Positivesplash10-00dl-9100000000-67dd993ef9b0fbeeeed42021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dianhydrodulcitol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dianhydrodulcitol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dianhydrodulcitol GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dianhydrodulcitol GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dianhydrodulcitol 10V, Positive-QTOFsplash10-000f-9100000000-33f780cfa798bb7f5cb42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dianhydrodulcitol 20V, Positive-QTOFsplash10-000f-9200000000-dcae9167c84ee00e1efd2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dianhydrodulcitol 40V, Positive-QTOFsplash10-00kf-9500000000-014364335b24fcc23bd02021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dianhydrodulcitol 10V, Negative-QTOFsplash10-006y-9400000000-1fcdbefceb8a8221298d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dianhydrodulcitol 20V, Negative-QTOFsplash10-00di-9000000000-4c5e6f42ea411d8b77272021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dianhydrodulcitol 40V, Negative-QTOFsplash10-0006-9000000000-c26bfff8c0984b37883d2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID29479
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]