Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 08:54:15 UTC
Update Date2021-09-26 23:03:35 UTC
HMDB IDHMDB0251540
Secondary Accession NumbersNone
Metabolite Identification
Common NameDimethyloxalylglycine
DescriptionDimethyloxalylglycine, also known as DMOG or N-oxalylglycine, belongs to the class of organic compounds known as n-acyl-alpha amino acids and derivatives. N-acyl-alpha amino acids and derivatives are compounds containing an alpha amino acid (or a derivative thereof) which bears an acyl group at its terminal nitrogen atom. Based on a literature review a significant number of articles have been published on Dimethyloxalylglycine. This compound has been identified in human blood as reported by (PMID: 31557052 ). Dimethyloxalylglycine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Dimethyloxalylglycine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
DMOGChEBI
Methyl N-(2-methoxy-2-oxoacetyl)glycinateChEBI
N-(2-Methoxy-2-oxoacetyl)glycine methyl esterChEBI
N-Oxalylglycine dimethyl esterChEBI
Methyl N-(2-methoxy-2-oxoacetyl)glycinic acidGenerator
DMOG CPDHMDB
N-(Carboxycarbonyl)glycineHMDB
N-OxalylglycineHMDB
OxaloglycineHMDB
OxalylglycineHMDB
Chemical FormulaC6H9NO5
Average Molecular Weight175.14
Monoisotopic Molecular Weight175.048072394
IUPAC Namemethyl [(2-methoxy-2-oxoethyl)carbamoyl]formate
Traditional Namemethyl [(2-methoxy-2-oxoethyl)carbamoyl]formate
CAS Registry NumberNot Available
SMILES
COC(=O)CNC(=O)C(=O)OC
InChI Identifier
InChI=1S/C6H9NO5/c1-11-4(8)3-7-5(9)6(10)12-2/h3H2,1-2H3,(H,7,9)
InChI KeyBNJOZDZCRHCODO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as n-acyl-alpha amino acids and derivatives. N-acyl-alpha amino acids and derivatives are compounds containing an alpha amino acid (or a derivative thereof) which bears an acyl group at its terminal nitrogen atom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentN-acyl-alpha amino acids and derivatives
Alternative Parents
Substituents
  • Alpha-amino acid ester
  • N-acyl-alpha amino acid or derivatives
  • Dicarboxylic acid or derivatives
  • Methyl ester
  • Carboxamide group
  • Carboxylic acid ester
  • Secondary carboxylic acid amide
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.53ALOGPS
logP-0.84ChemAxon
logS-1.1ALOGPS
pKa (Strongest Acidic)11.08ChemAxon
pKa (Strongest Basic)-6.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area81.7 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity36.78 m³·mol⁻¹ChemAxon
Polarizability15.93 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+128.2330932474
DeepCCS[M-H]-124.39530932474
DeepCCS[M-2H]-161.76430932474
DeepCCS[M+Na]+137.30430932474
AllCCS[M+H]+138.932859911
AllCCS[M+H-H2O]+135.232859911
AllCCS[M+NH4]+142.432859911
AllCCS[M+Na]+143.432859911
AllCCS[M-H]-136.132859911
AllCCS[M+Na-2H]-137.832859911
AllCCS[M+HCOO]-139.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
DimethyloxalylglycineCOC(=O)CNC(=O)C(=O)OC1914.9Standard polar33892256
DimethyloxalylglycineCOC(=O)CNC(=O)C(=O)OC1124.5Standard non polar33892256
DimethyloxalylglycineCOC(=O)CNC(=O)C(=O)OC1362.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Dimethyloxalylglycine,1TMS,isomer #1COC(=O)CN(C(=O)C(=O)OC)[Si](C)(C)C1474.7Semi standard non polar33892256
Dimethyloxalylglycine,1TMS,isomer #1COC(=O)CN(C(=O)C(=O)OC)[Si](C)(C)C1415.5Standard non polar33892256
Dimethyloxalylglycine,1TMS,isomer #1COC(=O)CN(C(=O)C(=O)OC)[Si](C)(C)C2086.3Standard polar33892256
Dimethyloxalylglycine,1TBDMS,isomer #1COC(=O)CN(C(=O)C(=O)OC)[Si](C)(C)C(C)(C)C1687.2Semi standard non polar33892256
Dimethyloxalylglycine,1TBDMS,isomer #1COC(=O)CN(C(=O)C(=O)OC)[Si](C)(C)C(C)(C)C1631.2Standard non polar33892256
Dimethyloxalylglycine,1TBDMS,isomer #1COC(=O)CN(C(=O)C(=O)OC)[Si](C)(C)C(C)(C)C2172.7Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Dimethyloxalylglycine GC-MS (Non-derivatized) - 70eV, Positivesplash10-014i-7900000000-99e72b5313c0b8a5c21c2021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Dimethyloxalylglycine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dimethyloxalylglycine 10V, Positive-QTOFsplash10-066r-8900000000-28796c874a581b0b796d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dimethyloxalylglycine 20V, Positive-QTOFsplash10-0aor-9300000000-8a927ad4e9662d4c71992021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dimethyloxalylglycine 40V, Positive-QTOFsplash10-0a4i-9000000000-7eea1c055cee0f883bc32021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dimethyloxalylglycine 10V, Negative-QTOFsplash10-0006-3900000000-8f9d666fc2218f0c91392021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dimethyloxalylglycine 20V, Negative-QTOFsplash10-0006-9300000000-6fa1df53df0a3c0e47322021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Dimethyloxalylglycine 40V, Negative-QTOFsplash10-0006-9000000000-adf662986c5e297f4e682021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-13Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID487098
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound560326
PDB IDNot Available
ChEBI ID102218
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]