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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 09:19:18 UTC
Update Date2021-09-26 23:03:55 UTC
HMDB IDHMDB0251738
Secondary Accession NumbersNone
Metabolite Identification
Common NameElbasvir
DescriptionElbasvir belongs to the class of organic compounds known as valine and derivatives. Valine and derivatives are compounds containing valine or a derivative thereof resulting from reaction of valine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom. Based on a literature review a significant number of articles have been published on Elbasvir. This compound has been identified in human blood as reported by (PMID: 31557052 ). Elbasvir is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Elbasvir is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC49H55N9O7
Average Molecular Weight882.035
Monoisotopic Molecular Weight881.422445147
IUPAC Namemethyl N-{1-[2-(5-{5-[2-(1-{2-[(methoxycarbonyl)amino]-3-methylbutanoyl}pyrrolidin-2-yl)-1H-imidazol-5-yl]-9-phenyl-8-oxa-10-azatetracyclo[8.7.0.0^{2,7}.0^{11,16}]heptadeca-1(17),2(7),3,5,11(16),12,14-heptaen-14-yl}-1H-imidazol-2-yl)pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl}carbamate
Traditional Namemethyl N-{1-[2-(4-{5-[2-(1-{2-[(methoxycarbonyl)amino]-3-methylbutanoyl}pyrrolidin-2-yl)-3H-imidazol-4-yl]-9-phenyl-8-oxa-10-azatetracyclo[8.7.0.0^{2,7}.0^{11,16}]heptadeca-1(17),2(7),3,5,11(16),12,14-heptaen-14-yl}-3H-imidazol-2-yl)pyrrolidin-1-yl]-3-methyl-1-oxobutan-2-yl}carbamate
CAS Registry NumberNot Available
SMILES
COC(=O)NC(C(C)C)C(=O)N1CCCC1C1=NC=C(N1)C1=CC2=C(C=C1)N1C(OC3=C(C=CC(=C3)C3=CN=C(N3)C3CCCN3C(=O)C(NC(=O)OC)C(C)C)C1=C2)C1=CC=CC=C1
InChI Identifier
InChI=1S/C49H55N9O7/c1-27(2)41(54-48(61)63-5)45(59)56-20-10-14-37(56)43-50-25-34(52-43)30-17-19-36-32(22-30)23-39-33-18-16-31(24-40(33)65-47(58(36)39)29-12-8-7-9-13-29)35-26-51-44(53-35)38-15-11-21-57(38)46(60)42(28(3)4)55-49(62)64-6/h7-9,12-13,16-19,22-28,37-38,41-42,47H,10-11,14-15,20-21H2,1-6H3,(H,50,52)(H,51,53)(H,54,61)(H,55,62)
InChI KeyBVAZQCUMNICBAQ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as valine and derivatives. Valine and derivatives are compounds containing valine or a derivative thereof resulting from reaction of valine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentValine and derivatives
Alternative Parents
Substituents
  • Valine or derivatives
  • Alpha-amino acid amide
  • Indole
  • Indole or derivatives
  • N-acylpyrrolidine
  • Monocyclic benzene moiety
  • Benzenoid
  • Azole
  • Imidazole
  • Heteroaromatic compound
  • Pyrrole
  • Pyrrolidine
  • Tertiary carboxylic acid amide
  • Carboxamide group
  • Carboximidic acid derivative
  • Oxacycle
  • Propargyl-type 1,3-dipolar organic compound
  • Organic 1,3-dipolar compound
  • Organoheterocyclic compound
  • Azacycle
  • Carbonyl group
  • Organic oxygen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP5.78ALOGPS
logP6.14ChemAxon
logS-5.3ALOGPS
pKa (Strongest Acidic)11.11ChemAxon
pKa (Strongest Basic)6.06ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area188.8 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity241.52 m³·mol⁻¹ChemAxon
Polarizability98.62 ųChemAxon
Number of Rings9ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+287.01930932474
DeepCCS[M-H]-285.14630932474
DeepCCS[M-2H]-319.17330932474
DeepCCS[M+Na]+292.99830932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ElbasvirCOC(=O)NC(C(C)C)C(=O)N1CCCC1C1=NC=C(N1)C1=CC2=C(C=C1)N1C(OC3=C(C=CC(=C3)C3=CN=C(N3)C3CCCN3C(=O)C(NC(=O)OC)C(C)C)C1=C2)C1=CC=CC=C18164.6Standard polar33892256
ElbasvirCOC(=O)NC(C(C)C)C(=O)N1CCCC1C1=NC=C(N1)C1=CC2=C(C=C1)N1C(OC3=C(C=CC(=C3)C3=CN=C(N3)C3CCCN3C(=O)C(NC(=O)OC)C(C)C)C1=C2)C1=CC=CC=C16309.0Standard non polar33892256
ElbasvirCOC(=O)NC(C(C)C)C(=O)N1CCCC1C1=NC=C(N1)C1=CC2=C(C=C1)N1C(OC3=C(C=CC(=C3)C3=CN=C(N3)C3CCCN3C(=O)C(NC(=O)OC)C(C)C)C1=C2)C1=CC=CC=C17669.0Semi standard non polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Elbasvir 10V, Positive-QTOFsplash10-01e9-0000014690-4558339d341f453e2f412021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Elbasvir 20V, Positive-QTOFsplash10-002g-0000003950-b13ed7107128cc60c12a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Elbasvir 40V, Positive-QTOFsplash10-0znd-9500003530-71b11afe52fe0de02f432021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Elbasvir 10V, Negative-QTOFsplash10-0006-1000001960-1e1bca56b366ea22f3212021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Elbasvir 20V, Negative-QTOFsplash10-0006-4000004950-7e3943f0117e150560d82021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Elbasvir 40V, Negative-QTOFsplash10-004l-6520008490-ea072a4dd673fad8e16d2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78433356
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkElbasvir
METLIN IDNot Available
PubChem Compound68069336
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]