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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 09:28:19 UTC
Update Date2021-09-26 23:04:06 UTC
HMDB IDHMDB0251844
Secondary Accession NumbersNone
Metabolite Identification
Common NameEpicocconone
Description6-(1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl)-11-(hydroxymethyl)-3-methyl-4,12-dioxatricyclo[7.4.0.0³,⁷]trideca-1(13),6,8-triene-2,5-dione belongs to the class of organic compounds known as cyclohexenones. Cyclohexenones are compounds containing a cylohexenone moiety, which is a six-membered aliphatic ring that carries a ketone and has one endocyclic double bond. 6-(1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl)-11-(hydroxymethyl)-3-methyl-4,12-dioxatricyclo[7.4.0.0³,⁷]trideca-1(13),6,8-triene-2,5-dione is an extremely weak basic (essentially neutral) compound (based on its pKa). This compound has been identified in human blood as reported by (PMID: 31557052 ). Epicocconone is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Epicocconone is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC23H22O7
Average Molecular Weight410.422
Monoisotopic Molecular Weight410.136553048
IUPAC Name6-(1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl)-11-(hydroxymethyl)-3-methyl-4,12-dioxatricyclo[7.4.0.0³,⁷]trideca-1(13),6,8-triene-2,5-dione
Traditional Name6-(1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl)-11-(hydroxymethyl)-3-methyl-4,12-dioxatricyclo[7.4.0.0³,⁷]trideca-1(13),6,8-triene-2,5-dione
CAS Registry NumberNot Available
SMILES
CC=CC=CC=CC(=O)C=C(O)C1=C2C=C3CC(CO)OC=C3C(=O)C2(C)OC1=O
InChI Identifier
InChI=1S/C23H22O7/c1-3-4-5-6-7-8-15(25)11-19(26)20-18-10-14-9-16(12-24)29-13-17(14)21(27)23(18,2)30-22(20)28/h3-8,10-11,13,16,24,26H,9,12H2,1-2H3
InChI KeyJKMBMIMLVFMXRW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cyclohexenones. Cyclohexenones are compounds containing a cylohexenone moiety, which is a six-membered aliphatic ring that carries a ketone and has one endocyclic double bond.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbonyl compounds
Direct ParentCyclohexenones
Alternative Parents
Substituents
  • Cyclohexenone
  • Alpha-acyloxy ketone
  • 2-furanone
  • Acryloyl-group
  • Dihydrofuran
  • Enone
  • Vinylogous ester
  • Vinylogous acid
  • Alpha,beta-unsaturated ketone
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Carboxylic acid ester
  • Lactone
  • Organoheterocyclic compound
  • Enol
  • Oxacycle
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.87ALOGPS
logP2.04ChemAxon
logS-4.2ALOGPS
pKa (Strongest Acidic)8.36ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area110.13 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity115.9 m³·mol⁻¹ChemAxon
Polarizability42.53 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+206.83930932474
DeepCCS[M-H]-204.39430932474
DeepCCS[M-2H]-238.77330932474
DeepCCS[M+Na]+214.00130932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
EpicoccononeCC=CC=CC=CC(=O)C=C(O)C1=C2C=C3CC(CO)OC=C3C(=O)C2(C)OC1=O5377.9Standard polar33892256
EpicoccononeCC=CC=CC=CC(=O)C=C(O)C1=C2C=C3CC(CO)OC=C3C(=O)C2(C)OC1=O3548.7Standard non polar33892256
EpicoccononeCC=CC=CC=CC(=O)C=C(O)C1=C2C=C3CC(CO)OC=C3C(=O)C2(C)OC1=O3747.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (Non-derivatized) - 70eV, Positivesplash10-0040-1519000000-0a3c7fa25239e3460ee12021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epicocconone GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epicocconone 10V, Positive-QTOFsplash10-03di-1006900000-8716136392fe1f1c44962021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epicocconone 20V, Positive-QTOFsplash10-066r-4119200000-31fbf296827f0fb1c2a52021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epicocconone 40V, Positive-QTOFsplash10-00or-9421200000-8598879623008abe34702021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epicocconone 10V, Negative-QTOFsplash10-0abi-0092600000-df26338a5a8c91cff1662021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epicocconone 20V, Negative-QTOFsplash10-0apl-1249300000-e183820046c9cd476fe52021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epicocconone 40V, Negative-QTOFsplash10-000l-9161000000-8f097a1afe27a07058b32021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound72376744
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]