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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 09:29:52 UTC
Update Date2021-09-26 23:04:07 UTC
HMDB IDHMDB0251858
Secondary Accession NumbersNone
Metabolite Identification
Common NameEpipinoresinol
Description(+)-Pinoresinol belongs to the class of organic compounds known as furanoid lignans. These are lignans with a structure that contains either a tetrahydrofuran ring, a furan ring, or a furofuan ring system, that arises from the joining of the two phenylpropanoid units (+)-Pinoresinol is found, on average, in the highest concentration within a few different foods, such as sesames (Sesamum orientale), flaxseeds (Linum usitatissimum), and olives (Olea europaea) and in a lower concentration in asparagus (Asparagus officinalis), breakfast cereal, and kiwis (Actinidia chinensis) (+)-Pinoresinol has also been detected, but not quantified in, several different foods, such as sour cherries (Prunus cerasus), saskatoon berries (Amelanchier alnifolia), napa cabbages (Brassica rapa var. pekinensis), jew's ears (Auricularia auricula-judae), and medlars (Mespilus germanica). This could make (+)-pinoresinol a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on (+)-Pinoresinol. This compound has been identified in human blood as reported by (PMID: 31557052 ). Epipinoresinol is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Epipinoresinol is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
Pino-resinolMeSH
Chemical FormulaC20H22O6
Average Molecular Weight358.3851
Monoisotopic Molecular Weight358.141638436
IUPAC Name4-[4-(4-hydroxy-3-methoxyphenyl)-hexahydrofuro[3,4-c]furan-1-yl]-2-methoxyphenol
Traditional Namepinoresinol
CAS Registry NumberNot Available
SMILES
COC1=CC(=CC=C1O)C1OCC2C1COC2C1=CC=C(O)C(OC)=C1
InChI Identifier
InChI=1S/C20H22O6/c1-23-17-7-11(3-5-15(17)21)19-13-9-26-20(14(13)10-25-19)12-4-6-16(22)18(8-12)24-2/h3-8,13-14,19-22H,9-10H2,1-2H3
InChI KeyHGXBRUKMWQGOIE-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as furanoid lignans. These are lignans with a structure that contains either a tetrahydrofuran ring, a furan ring, or a furofuan ring system, that arises from the joining of the two phenylpropanoid units.
KingdomOrganic compounds
Super ClassLignans, neolignans and related compounds
ClassFuranoid lignans
Sub ClassNot Available
Direct ParentFuranoid lignans
Alternative Parents
Substituents
  • Furanoid lignan
  • Furofuran lignan skeleton
  • Methoxyphenol
  • Phenoxy compound
  • Anisole
  • Furofuran
  • Methoxybenzene
  • Phenol ether
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • Tetrahydrofuran
  • Organoheterocyclic compound
  • Oxacycle
  • Ether
  • Dialkyl ether
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.31ALOGPS
logP2.28ChemAxon
logS-4.1ALOGPS
pKa (Strongest Acidic)9.61ChemAxon
pKa (Strongest Basic)-3.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area77.38 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity95.1 m³·mol⁻¹ChemAxon
Polarizability37.47 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+183.88930932474
DeepCCS[M-H]-181.53130932474
DeepCCS[M-2H]-215.49130932474
DeepCCS[M+Na]+190.84230932474
AllCCS[M+H]+186.232859911
AllCCS[M+H-H2O]+183.432859911
AllCCS[M+NH4]+188.832859911
AllCCS[M+Na]+189.532859911
AllCCS[M-H]-184.632859911
AllCCS[M+Na-2H]-184.532859911
AllCCS[M+HCOO]-184.432859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Epipinoresinol,1TMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C)C(OC)=C4)OCC23)=CC=C1O3152.7Semi standard non polar33892256
Epipinoresinol,1TMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C)C(OC)=C4)OCC23)=CC=C1O2997.1Standard non polar33892256
Epipinoresinol,1TMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C)C(OC)=C4)OCC23)=CC=C1O4204.4Standard polar33892256
Epipinoresinol,2TMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C)C(OC)=C4)OCC23)=CC=C1O[Si](C)(C)C3126.2Semi standard non polar33892256
Epipinoresinol,2TMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C)C(OC)=C4)OCC23)=CC=C1O[Si](C)(C)C3087.0Standard non polar33892256
Epipinoresinol,2TMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C)C(OC)=C4)OCC23)=CC=C1O[Si](C)(C)C3862.5Standard polar33892256
Epipinoresinol,1TBDMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C4)OCC23)=CC=C1O3417.3Semi standard non polar33892256
Epipinoresinol,1TBDMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C4)OCC23)=CC=C1O3259.0Standard non polar33892256
Epipinoresinol,1TBDMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C4)OCC23)=CC=C1O4252.1Standard polar33892256
Epipinoresinol,2TBDMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C4)OCC23)=CC=C1O[Si](C)(C)C(C)(C)C3615.3Semi standard non polar33892256
Epipinoresinol,2TBDMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C4)OCC23)=CC=C1O[Si](C)(C)C(C)(C)C3572.7Standard non polar33892256
Epipinoresinol,2TBDMS,isomer #1COC1=CC(C2OCC3C(C4=CC=C(O[Si](C)(C)C(C)(C)C)C(OC)=C4)OCC23)=CC=C1O[Si](C)(C)C(C)(C)C4001.8Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Epipinoresinol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0ktr-0942000000-2e6564d933d370f5b6562021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epipinoresinol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Epipinoresinol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0fe0-0900000000-ff1e3dfb651aa2b141322021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0udi-0902000000-d5573f6ac1911a33025f2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0udr-0901000000-f74d4dd3daee0a45e6172021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-000i-0900000000-50c5d5430586027627b82021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-000i-0900000000-f0315d8aa4923eb730812021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-000i-2900000000-29afb6d9d192bfd7770a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0a4i-0209000000-0758ab7c575c0047224a2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0a4i-0109000000-7b1f29c70ffb9f5be3942021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0a4i-0219000000-26867d8cf5d94e80d0f82021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0f79-0900000000-daafbab4b97472c468d32021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-000i-0900000000-de999b102dbea26b29ba2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Epipinoresinol 6V, Positive-QTOFsplash10-0udi-0911000000-23844deff415027a0a772021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 10V, Positive-QTOFsplash10-0a4i-0009000000-11d766152c5a688da9552015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 20V, Positive-QTOFsplash10-0a4i-0059000000-63d98ccc4d33bd94d1902015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 40V, Positive-QTOFsplash10-0udi-6900000000-dc6265874a30cc9c9d612015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 10V, Positive-QTOFsplash10-0a4i-0009000000-11d766152c5a688da9552015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 20V, Positive-QTOFsplash10-0a4i-0059000000-63d98ccc4d33bd94d1902015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 40V, Positive-QTOFsplash10-0udi-6900000000-dc6265874a30cc9c9d612015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 10V, Negative-QTOFsplash10-0a4i-0009000000-a2212a91e5dc80fcfd732015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 20V, Negative-QTOFsplash10-0a4i-0119000000-6e96a42058fcbd82c0e82015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 40V, Negative-QTOFsplash10-0udr-1923000000-7c2853d92265d590f8392015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 10V, Negative-QTOFsplash10-0a4i-0009000000-a2212a91e5dc80fcfd732015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 20V, Negative-QTOFsplash10-0a4i-0119000000-6e96a42058fcbd82c0e82015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 40V, Negative-QTOFsplash10-0udr-1923000000-7c2853d92265d590f8392015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Epipinoresinol 10V, Positive-QTOFsplash10-0a4i-0019000000-813dbf267f330d130e3a2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002760
KNApSAcK IDNot Available
Chemspider ID204822
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkPinoresinol
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]