Record Information |
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Version | 5.0 |
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Status | Detected but not Quantified |
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Creation Date | 2021-09-11 11:14:36 UTC |
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Update Date | 2021-09-26 23:06:04 UTC |
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HMDB ID | HMDB0253071 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | Heliotridine |
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Description | 7-(hydroxymethyl)-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-ol belongs to the class of organic compounds known as alkaloids and derivatives. These are naturally occurring chemical compounds that contain mostly basic nitrogen atoms. This group also includes some related compounds with neutral and even weakly acidic properties. Also some synthetic compounds of similar structure are attributed to alkaloids. In addition to carbon, hydrogen and nitrogen, alkaloids may also contain oxygen, sulfur and more rarely other elements such as chlorine, bromine, and phosphorus. Based on a literature review very few articles have been published on 7-(hydroxymethyl)-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-ol. This compound has been identified in human blood as reported by (PMID: 31557052 ). Heliotridine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Heliotridine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. |
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Structure | InChI=1S/C8H13NO2/c10-5-6-1-3-9-4-2-7(11)8(6)9/h1,7-8,10-11H,2-5H2 |
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Synonyms | Value | Source |
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Retronecine | MeSH | Retronecine, (1S-cis)-isomer | MeSH | Retronecine, monohydrochloride, (1S-cis)-isomer | MeSH | Retronecine, monohydrochloride, (1S-trans)-isomer | MeSH |
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Chemical Formula | C8H13NO2 |
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Average Molecular Weight | 155.197 |
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Monoisotopic Molecular Weight | 155.094628663 |
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IUPAC Name | 7-(hydroxymethyl)-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-ol |
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Traditional Name | retronecine |
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CAS Registry Number | Not Available |
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SMILES | OCC1=CCN2CCC(O)C12 |
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InChI Identifier | InChI=1S/C8H13NO2/c10-5-6-1-3-9-4-2-7(11)8(6)9/h1,7-8,10-11H,2-5H2 |
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InChI Key | HJSJELVDQOXCHO-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as alkaloids and derivatives. These are naturally occurring chemical compounds that contain mostly basic nitrogen atoms. This group also includes some related compounds with neutral and even weakly acidic properties. Also some synthetic compounds of similar structure are attributed to alkaloids. In addition to carbon, hydrogen and nitrogen, alkaloids may also contain oxygen, sulfur and more rarely other elements such as chlorine, bromine, and phosphorus. |
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Kingdom | Organic compounds |
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Super Class | Alkaloids and derivatives |
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Class | Not Available |
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Sub Class | Not Available |
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Direct Parent | Alkaloids and derivatives |
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Alternative Parents | |
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Substituents | - Alkaloid or derivatives
- Pyrrolizine
- N-alkylpyrrolidine
- 1,3-aminoalcohol
- Pyrrolidine
- Pyrroline
- Secondary alcohol
- Tertiary amine
- Tertiary aliphatic amine
- Azacycle
- Organoheterocyclic compound
- Alcohol
- Organic nitrogen compound
- Hydrocarbon derivative
- Organopnictogen compound
- Organic oxygen compound
- Primary alcohol
- Organooxygen compound
- Organonitrogen compound
- Amine
- Aliphatic heteropolycyclic compound
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Molecular Framework | Aliphatic heteropolycyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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Heliotridine,1TMS,isomer #2 | C[Si](C)(C)OC1CCN2CC=C(CO)C12 | 1531.1 | Semi standard non polar | 33892256 | Heliotridine,1TMS,isomer #2 | C[Si](C)(C)OC1CCN2CC=C(CO)C12 | 1475.5 | Standard non polar | 33892256 | Heliotridine,1TMS,isomer #2 | C[Si](C)(C)OC1CCN2CC=C(CO)C12 | 2207.5 | Standard polar | 33892256 | Heliotridine,2TMS,isomer #1 | C[Si](C)(C)OCC1=CCN2CCC(O[Si](C)(C)C)C12 | 1581.0 | Semi standard non polar | 33892256 | Heliotridine,2TMS,isomer #1 | C[Si](C)(C)OCC1=CCN2CCC(O[Si](C)(C)C)C12 | 1630.6 | Standard non polar | 33892256 | Heliotridine,2TMS,isomer #1 | C[Si](C)(C)OCC1=CCN2CCC(O[Si](C)(C)C)C12 | 1969.1 | Standard polar | 33892256 | Heliotridine,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CCN2CCC(O)C12 | 1759.0 | Semi standard non polar | 33892256 | Heliotridine,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CCN2CCC(O)C12 | 1749.6 | Standard non polar | 33892256 | Heliotridine,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CCN2CCC(O)C12 | 2309.9 | Standard polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - Heliotridine GC-MS (Non-derivatized) - 70eV, Positive | splash10-0171-9800000000-6d6d9b7395d0aa504c2f | 2021-09-23 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Heliotridine GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Heliotridine GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Heliotridine GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-04 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Heliotridine GC-MS (TBDMS_1_2) - 70eV, Positive | Not Available | 2021-11-04 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Heliotridine GC-MS (TBDMS_2_1) - 70eV, Positive | Not Available | 2021-11-04 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Heliotridine 10V, Positive-QTOF | splash10-0a4i-0900000000-53548775246804534a97 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Heliotridine 20V, Positive-QTOF | splash10-06y9-2900000000-8d5f9e79431aa8025b71 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Heliotridine 40V, Positive-QTOF | splash10-0f8c-9200000000-083f0bf702e61b85e0a6 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Heliotridine 10V, Negative-QTOF | splash10-0uk9-0900000000-7cb2b0134bb9275c44e6 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Heliotridine 20V, Negative-QTOF | splash10-0udi-0900000000-e8a7b1e63db4542b57a8 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Heliotridine 40V, Negative-QTOF | splash10-0gb9-9700000000-a68ccbcb78567f8a3811 | 2021-10-12 | Wishart Lab | View Spectrum |
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