Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 11:50:28 UTC
Update Date2021-09-26 23:06:35 UTC
HMDB IDHMDB0253403
Secondary Accession NumbersNone
Metabolite Identification
Common Name3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione
Description3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione, also known as im-1-2 compound or (e)-N2-carbamoyl-N1-((6-chloro-3-pyridyl)methyl)-N1-methylacetamidine, belongs to the class of organic compounds known as alpha amino acids and derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon), or a derivative thereof. Based on a literature review very few articles have been published on 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione. This compound has been identified in human blood as reported by (PMID: 31557052 ). 3-[2-(4-fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1h-indol-3-yl)pyrrole-2,5-dione is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
(e)-N2-Carbamoyl-N1-((6-chloro-3-pyridyl)methyl)-N1-methylacetamidineMeSH
3-(4-Fluorophenylethylamino)-1-methyl-4-(2-methyl-1H-indol-3-yl)-1H-pyrrole-2,5-dioneMeSH
IM-1-2 compoundMeSH
IM-12 compoundMeSH
Chemical FormulaC22H20FN3O2
Average Molecular Weight377.419
Monoisotopic Molecular Weight377.153955059
IUPAC Name3-{[2-(4-fluorophenyl)ethyl]amino}-1-methyl-4-(2-methyl-1H-indol-3-yl)-2,5-dihydro-1H-pyrrole-2,5-dione
Traditional Name3-{[2-(4-fluorophenyl)ethyl]amino}-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione
CAS Registry NumberNot Available
SMILES
CN1C(=O)C(NCCC2=CC=C(F)C=C2)=C(C1=O)C1=C(C)NC2=CC=CC=C12
InChI Identifier
InChI=1S/C22H20FN3O2/c1-13-18(16-5-3-4-6-17(16)25-13)19-20(22(28)26(2)21(19)27)24-12-11-14-7-9-15(23)10-8-14/h3-10,24-25H,11-12H2,1-2H3
InChI KeyZKJAZFUFPPSFCO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alpha amino acids and derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon), or a derivative thereof.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentAlpha amino acids and derivatives
Alternative Parents
Substituents
  • Alpha-amino acid or derivatives
  • Indole
  • Indole or derivatives
  • Phenethylamine
  • Fluorobenzene
  • Halobenzene
  • Aralkylamine
  • Maleimide
  • Aryl fluoride
  • Aryl halide
  • Monocyclic benzene moiety
  • Carboxylic acid imide, n-substituted
  • Benzenoid
  • Substituted pyrrole
  • Carboxylic acid imide
  • Dicarboximide
  • Heteroaromatic compound
  • Vinylogous amide
  • Pyrrole
  • Pyrroline
  • Secondary amine
  • Secondary aliphatic amine
  • Organoheterocyclic compound
  • Azacycle
  • Enamine
  • Organic oxide
  • Hydrocarbon derivative
  • Amine
  • Organic oxygen compound
  • Organic nitrogen compound
  • Carbonyl group
  • Organofluoride
  • Organonitrogen compound
  • Organooxygen compound
  • Organohalogen compound
  • Organopnictogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.54ALOGPS
logP2.99ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)14.68ChemAxon
pKa (Strongest Basic)-4.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area65.2 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity106.92 m³·mol⁻¹ChemAxon
Polarizability40.01 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-221.30430932474
DeepCCS[M+Na]+196.53230932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dioneCN1C(=O)C(NCCC2=CC=C(F)C=C2)=C(C1=O)C1=C(C)NC2=CC=CC=C124520.9Standard polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dioneCN1C(=O)C(NCCC2=CC=C(F)C=C2)=C(C1=O)C1=C(C)NC2=CC=CC=C123243.1Standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dioneCN1C(=O)C(NCCC2=CC=C(F)C=C2)=C(C1=O)C1=C(C)NC2=CC=CC=C123420.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2[NH]13311.6Semi standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2[NH]13034.3Standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2[NH]13954.8Standard polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TMS,isomer #2CC1=C(C2=C(NCCC3=CC=C(F)C=C3)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C3264.1Semi standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TMS,isomer #2CC1=C(C2=C(NCCC3=CC=C(F)C=C3)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C3054.2Standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TMS,isomer #2CC1=C(C2=C(NCCC3=CC=C(F)C=C3)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C4244.1Standard polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,2TMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C3265.4Semi standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,2TMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C3032.6Standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,2TMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C3646.3Standard polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TBDMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C(C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2[NH]13518.0Semi standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TBDMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C(C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2[NH]13215.3Standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TBDMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C(C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2[NH]14000.1Standard polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TBDMS,isomer #2CC1=C(C2=C(NCCC3=CC=C(F)C=C3)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C(C)(C)C3453.5Semi standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TBDMS,isomer #2CC1=C(C2=C(NCCC3=CC=C(F)C=C3)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C(C)(C)C3235.9Standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,1TBDMS,isomer #2CC1=C(C2=C(NCCC3=CC=C(F)C=C3)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C(C)(C)C4262.3Standard polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,2TBDMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C(C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C(C)(C)C3608.7Semi standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,2TBDMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C(C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C(C)(C)C3401.4Standard non polar33892256
3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione,2TBDMS,isomer #1CC1=C(C2=C(N(CCC3=CC=C(F)C=C3)[Si](C)(C)C(C)(C)C)C(=O)N(C)C2=O)C2=CC=CC=C2N1[Si](C)(C)C(C)(C)C3761.5Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione GC-MS (Non-derivatized) - 70eV, Positivesplash10-090r-0894000000-f819d0477653674b2bc72021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione 10V, Positive-QTOFsplash10-004i-0009000000-338e14478ff2394db5942021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione 20V, Positive-QTOFsplash10-004i-0519000000-b563f4c97652d2f741a02021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione 40V, Positive-QTOFsplash10-05dl-0879000000-261a9f34aabb115fe65a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione 10V, Negative-QTOFsplash10-004i-0009000000-cefadc182c5374d635b12021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione 20V, Negative-QTOFsplash10-004i-0029000000-1a925d5e27a01cb62c272021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-[2-(4-Fluorophenyl)ethylamino]-1-methyl-4-(2-methyl-1H-indol-3-yl)pyrrole-2,5-dione 40V, Negative-QTOFsplash10-014i-1943000000-a1a6dc48b9cf9323ccff2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID26350622
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound25209788
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]