Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 13:27:15 UTC
Update Date2021-09-26 23:08:08 UTC
HMDB IDHMDB0254257
Secondary Accession NumbersNone
Metabolite Identification
Common NameLykurim
Description2-[(2,3-dihydroxy-4-{[2-(methanesulfonyloxy)ethyl]amino}butyl)amino]ethyl methanesulfonate belongs to the class of organic compounds known as organosulfonic acid esters. These are esters of sulfonic acid, which have the general structure RS(=O)2OR' (R,R' = organyl, not H). Based on a literature review very few articles have been published on 2-[(2,3-dihydroxy-4-{[2-(methanesulfonyloxy)ethyl]amino}butyl)amino]ethyl methanesulfonate. This compound has been identified in human blood as reported by (PMID: 31557052 ). Lykurim is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Lykurim is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
2-[(2,3-Dihydroxy-4-{[2-(methanesulfonyloxy)ethyl]amino}butyl)amino]ethyl methanesulfonic acidGenerator
2-[(2,3-Dihydroxy-4-{[2-(methanesulphonyloxy)ethyl]amino}butyl)amino]ethyl methanesulphonateGenerator
2-[(2,3-Dihydroxy-4-{[2-(methanesulphonyloxy)ethyl]amino}butyl)amino]ethyl methanesulphonic acidGenerator
DimesylerythritolMeSH
LycurimMeSH
RitosulfanMeSH
Ritrosulfan, (r*,s*)-isomer, 14C-labeledMeSH
Ritrosulfan, dihydrochloride, (r*,s*)-isomerMeSH
Ritrosulfan, dimethanesulfonate, (r*,s*)-isomerMeSH
Chemical FormulaC10H24N2O8S2
Average Molecular Weight364.43
Monoisotopic Molecular Weight364.097408089
IUPAC Name2-[(2,3-dihydroxy-4-{[2-(methanesulfonyloxy)ethyl]amino}butyl)amino]ethyl methanesulfonate
Traditional Name2-[(2,3-dihydroxy-4-{[2-(methanesulfonyloxy)ethyl]amino}butyl)amino]ethyl methanesulfonate
CAS Registry NumberNot Available
SMILES
CS(=O)(=O)OCCNCC(O)C(O)CNCCOS(C)(=O)=O
InChI Identifier
InChI=1S/C10H24N2O8S2/c1-21(15,16)19-5-3-11-7-9(13)10(14)8-12-4-6-20-22(2,17)18/h9-14H,3-8H2,1-2H3
InChI KeyBYZJBHCTZJGJFV-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as organosulfonic acid esters. These are esters of sulfonic acid, which have the general structure RS(=O)2OR' (R,R' = organyl, not H).
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassOrganic sulfonic acids and derivatives
Sub ClassOrganosulfonic acids and derivatives
Direct ParentOrganosulfonic acid esters
Alternative Parents
Substituents
  • Organosulfonic acid ester
  • Sulfonic acid ester
  • 1,3-aminoalcohol
  • Methanesulfonate
  • Sulfonyl
  • 1,2-aminoalcohol
  • 1,2-diol
  • Secondary alcohol
  • Secondary aliphatic amine
  • Secondary amine
  • Organic nitrogen compound
  • Organosulfur compound
  • Organooxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Amine
  • Alcohol
  • Organopnictogen compound
  • Organic oxygen compound
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-2.1ALOGPS
logP-3.3ChemAxon
logS-1.9ALOGPS
pKa (Strongest Acidic)13.51ChemAxon
pKa (Strongest Basic)8.34ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count8ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area151.26 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity77.43 m³·mol⁻¹ChemAxon
Polarizability36.12 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+172.59930932474
DeepCCS[M-H]-170.24130932474
DeepCCS[M-2H]-203.12830932474
DeepCCS[M+Na]+178.69230932474
AllCCS[M+H]+180.032859911
AllCCS[M+H-H2O]+177.632859911
AllCCS[M+NH4]+182.232859911
AllCCS[M+Na]+182.832859911
AllCCS[M-H]-176.232859911
AllCCS[M+Na-2H]-177.132859911
AllCCS[M+HCOO]-178.232859911

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Lykurim,2TMS,isomer #3C[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C2984.5Semi standard non polar33892256
Lykurim,2TMS,isomer #3C[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C3101.2Standard non polar33892256
Lykurim,2TMS,isomer #3C[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C4489.6Standard polar33892256
Lykurim,3TMS,isomer #1C[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C)O[Si](C)(C)C2939.4Semi standard non polar33892256
Lykurim,3TMS,isomer #1C[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C)O[Si](C)(C)C3275.9Standard non polar33892256
Lykurim,3TMS,isomer #1C[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C)O[Si](C)(C)C4019.0Standard polar33892256
Lykurim,3TMS,isomer #2C[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C3121.4Semi standard non polar33892256
Lykurim,3TMS,isomer #2C[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C3310.2Standard non polar33892256
Lykurim,3TMS,isomer #2C[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C4176.9Standard polar33892256
Lykurim,4TMS,isomer #1C[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C)O[Si](C)(C)C3085.0Semi standard non polar33892256
Lykurim,4TMS,isomer #1C[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C)O[Si](C)(C)C3475.5Standard non polar33892256
Lykurim,4TMS,isomer #1C[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C)O[Si](C)(C)C3747.0Standard polar33892256
Lykurim,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(O)CNCCOS(C)(=O)=O3403.8Semi standard non polar33892256
Lykurim,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(O)CNCCOS(C)(=O)=O3632.9Standard non polar33892256
Lykurim,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(O)CNCCOS(C)(=O)=O4411.0Standard polar33892256
Lykurim,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3578.7Semi standard non polar33892256
Lykurim,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C4066.7Standard non polar33892256
Lykurim,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CNCCOS(C)(=O)=O)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C4002.6Standard polar33892256
Lykurim,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C3758.3Semi standard non polar33892256
Lykurim,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C4080.9Standard non polar33892256
Lykurim,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(O)CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C4148.7Standard polar33892256
Lykurim,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3952.8Semi standard non polar33892256
Lykurim,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C4454.0Standard non polar33892256
Lykurim,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)C(CN(CCOS(C)(=O)=O)[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3835.4Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (Non-derivatized) - 70eV, Positivesplash10-0gx0-2941000000-db3e79a1c6719c4e4f182021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Lykurim GC-MS (TBDMS_2_4) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lykurim 10V, Positive-QTOFsplash10-00kb-0019000000-2b54f7dce39809a1ded92021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lykurim 20V, Positive-QTOFsplash10-1009-0690000000-2a384622ed23269c38142021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lykurim 40V, Positive-QTOFsplash10-1000-4960000000-0c5b69f374f10d8d47b92021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lykurim 10V, Negative-QTOFsplash10-03di-0009000000-28f5e23644b59e6cce062021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lykurim 20V, Negative-QTOFsplash10-0r09-1493000000-c467f4455c9e1cb04db92021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Lykurim 40V, Negative-QTOFsplash10-00bl-6940000000-f2d0133220c7aa656bd22021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID18943
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound20107
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]