Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 13:56:17 UTC
Update Date2021-09-26 23:08:38 UTC
HMDB IDHMDB0254560
Secondary Accession NumbersNone
Metabolite Identification
Common Namemethyl 1-methylpiperidine-3-carboxylate
Descriptionmethyl 1-methylpiperidine-3-carboxylate belongs to the class of organic compounds known as piperidinecarboxylic acids. Piperidinecarboxylic acids are compounds containing a piperidine ring which bears a carboxylic acid group. methyl 1-methylpiperidine-3-carboxylate is a very strong basic compound (based on its pKa). This compound has been identified in human blood as reported by (PMID: 31557052 ). Methyl 1-methylpiperidine-3-carboxylate is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically methyl 1-methylpiperidine-3-carboxylate is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
Methyl 1-methylpiperidine-3-carboxylic acidGenerator
Complement factor DMeSH
Convertase, proactivatorMeSH
Factor DMeSH
Factor D, complementMeSH
Factor D, properdinMeSH
C3 Convertase activatorMeSH
C3 Proactivator convertaseMeSH
Complement D componentMeSH
Convertase, C3paMeSH
D Component OF complementMeSH
Proactivator convertaseMeSH
Protein D, complementMeSH
28 KDa protein, adipocyteMeSH
AdipsinMeSH
C3PA convertaseMeSH
C3PAseMeSH
Complement protein DMeSH
Convertase activator, C3MeSH
GBGaseMeSH
Activator, C3 convertaseMeSH
Convertase, C3 proactivatorMeSH
Properdin factor DMeSH
Chemical FormulaC8H15NO2
Average Molecular Weight157.213
Monoisotopic Molecular Weight157.110278727
IUPAC Namemethyl 1-methylpiperidine-3-carboxylate
Traditional Namemethyl 1-methylpiperidine-3-carboxylate
CAS Registry NumberNot Available
SMILES
COC(=O)C1CCCN(C)C1
InChI Identifier
InChI=1S/C8H15NO2/c1-9-5-3-4-7(6-9)8(10)11-2/h7H,3-6H2,1-2H3
InChI KeyLLEOWWWENNCINW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as piperidinecarboxylic acids. Piperidinecarboxylic acids are compounds containing a piperidine ring which bears a carboxylic acid group.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPiperidines
Sub ClassPiperidinecarboxylic acids and derivatives
Direct ParentPiperidinecarboxylic acids
Alternative Parents
Substituents
  • Piperidinecarboxylic acid
  • Methyl ester
  • Amino acid or derivatives
  • Carboxylic acid ester
  • Tertiary amine
  • Tertiary aliphatic amine
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Azacycle
  • Organopnictogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Amine
  • Organic oxygen compound
  • Carbonyl group
  • Organic oxide
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0.55ALOGPS
logP0.57ChemAxon
logS0.4ALOGPS
pKa (Strongest Basic)8.8ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area29.54 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity42.99 m³·mol⁻¹ChemAxon
Polarizability17.69 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+137.56430932474
DeepCCS[M-H]-134.9730932474
DeepCCS[M-2H]-171.19330932474
DeepCCS[M+Na]+146.49730932474
AllCCS[M+H]+133.632859911
AllCCS[M+H-H2O]+129.232859911
AllCCS[M+NH4]+137.832859911
AllCCS[M+Na]+138.932859911
AllCCS[M-H]-136.432859911
AllCCS[M+Na-2H]-138.032859911
AllCCS[M+HCOO]-139.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
methyl 1-methylpiperidine-3-carboxylateCOC(=O)C1CCCN(C)C11563.0Standard polar33892256
methyl 1-methylpiperidine-3-carboxylateCOC(=O)C1CCCN(C)C11142.6Standard non polar33892256
methyl 1-methylpiperidine-3-carboxylateCOC(=O)C1CCCN(C)C11179.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - methyl 1-methylpiperidine-3-carboxylate GC-MS (Non-derivatized) - 70eV, Positivesplash10-006w-9400000000-6da86dcefd6dcfdd8b852021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - methyl 1-methylpiperidine-3-carboxylate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - methyl 1-methylpiperidine-3-carboxylate 10V, Positive-QTOFsplash10-0a4i-2900000000-bec7e795b15398f8f28b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - methyl 1-methylpiperidine-3-carboxylate 20V, Positive-QTOFsplash10-054k-9600000000-4b266fd05c9000108b682021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - methyl 1-methylpiperidine-3-carboxylate 40V, Positive-QTOFsplash10-052b-9100000000-811fcc27d9d7218721b22021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - methyl 1-methylpiperidine-3-carboxylate 10V, Negative-QTOFsplash10-0a4i-0900000000-0f7129c598f6efd386572021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - methyl 1-methylpiperidine-3-carboxylate 20V, Negative-QTOFsplash10-00di-0900000000-570d2b4ff626e8928b052021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - methyl 1-methylpiperidine-3-carboxylate 40V, Negative-QTOFsplash10-0006-9100000000-fa717e2179efa3980d822021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound15535
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]