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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 14:17:00 UTC
Update Date2021-09-26 23:09:07 UTC
HMDB IDHMDB0254827
Secondary Accession NumbersNone
Metabolite Identification
Common NameMofarotene
Description4-(2-{4-[2-(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)prop-1-en-1-yl]phenoxy}ethyl)morpholine belongs to the class of organic compounds known as stilbenes. These are organic compounds containing a 1,2-diphenylethylene moiety. Stilbenes (C6-C2-C6 ) are derived from the common phenylpropene (C6-C3) skeleton building block. The introduction of one or more hydroxyl groups to a phenyl ring lead to stilbenoids. Based on a literature review very few articles have been published on 4-(2-{4-[2-(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)prop-1-en-1-yl]phenoxy}ethyl)morpholine. This compound has been identified in human blood as reported by (PMID: 31557052 ). Mofarotene is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Mofarotene is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC29H39NO2
Average Molecular Weight433.636
Monoisotopic Molecular Weight433.2980795
IUPAC Name4-(2-{4-[2-(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)prop-1-en-1-yl]phenoxy}ethyl)morpholine
Traditional Name4-(2-{4-[2-(5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl)prop-1-en-1-yl]phenoxy}ethyl)morpholine
CAS Registry NumberNot Available
SMILES
CC(=CC1=CC=C(OCCN2CCOCC2)C=C1)C1=CC2=C(C=C1)C(C)(C)CCC2(C)C
InChI Identifier
InChI=1S/C29H39NO2/c1-22(24-8-11-26-27(21-24)29(4,5)13-12-28(26,2)3)20-23-6-9-25(10-7-23)32-19-16-30-14-17-31-18-15-30/h6-11,20-21H,12-19H2,1-5H3
InChI KeyOUQPTBCOEKUHBH-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as stilbenes. These are organic compounds containing a 1,2-diphenylethylene moiety. Stilbenes (C6-C2-C6 ) are derived from the common phenylpropene (C6-C3) skeleton building block. The introduction of one or more hydroxyl groups to a phenyl ring lead to stilbenoids.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassStilbenes
Sub ClassNot Available
Direct ParentStilbenes
Alternative Parents
Substituents
  • Stilbene
  • Tetralin
  • Phenoxy compound
  • Styrene
  • Phenol ether
  • Alkyl aryl ether
  • Benzenoid
  • Oxazinane
  • Morpholine
  • Monocyclic benzene moiety
  • Tertiary aliphatic amine
  • Tertiary amine
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Ether
  • Dialkyl ether
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP6.92ALOGPS
logP6.88ChemAxon
logS-6.6ALOGPS
pKa (Strongest Basic)6.66ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area21.7 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity134.88 m³·mol⁻¹ChemAxon
Polarizability53.37 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+205.38330932474
DeepCCS[M-H]-203.02530932474
DeepCCS[M-2H]-236.65530932474
DeepCCS[M+Na]+211.88330932474
AllCCS[M+H]+210.632859911
AllCCS[M+H-H2O]+208.332859911
AllCCS[M+NH4]+212.732859911
AllCCS[M+Na]+213.332859911
AllCCS[M-H]-213.732859911
AllCCS[M+Na-2H]-214.532859911
AllCCS[M+HCOO]-215.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
MofaroteneCC(=CC1=CC=C(OCCN2CCOCC2)C=C1)C1=CC2=C(C=C1)C(C)(C)CCC2(C)C3908.0Standard polar33892256
MofaroteneCC(=CC1=CC=C(OCCN2CCOCC2)C=C1)C1=CC2=C(C=C1)C(C)(C)CCC2(C)C3347.2Standard non polar33892256
MofaroteneCC(=CC1=CC=C(OCCN2CCOCC2)C=C1)C1=CC2=C(C=C1)C(C)(C)CCC2(C)C3508.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Mofarotene GC-MS (Non-derivatized) - 70eV, Positivesplash10-014i-3127900000-81594e8b63df1c10111c2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Mofarotene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Mofarotene 10V, Positive-QTOFsplash10-01q9-1504900000-6065f3730add58778f3a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Mofarotene 20V, Positive-QTOFsplash10-03k9-4809300000-5d1fd803e921d4a8a15d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Mofarotene 40V, Positive-QTOFsplash10-00di-9303000000-4a5e14625bf382f8f82d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Mofarotene 10V, Negative-QTOFsplash10-001i-0000900000-fd59db39591e1ddba44a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Mofarotene 20V, Negative-QTOFsplash10-00lr-0107900000-6385ce0415109fab927f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Mofarotene 40V, Negative-QTOFsplash10-0gb9-0109000000-a6405630f8b20bb826ea2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID59355
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound65952
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]