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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 18:18:29 UTC
Update Date2021-09-26 23:13:41 UTC
HMDB IDHMDB0257372
Secondary Accession NumbersNone
Metabolite Identification
Common Name[(2S,3As,7aS)-Octahydro-1-[[(1R,2R)-2-phenylcyclopropyl]carbonyl]-1H-indol-2-yl]-3-thiazolidinyl--methanone
Description1-(2-phenylcyclopropanecarbonyl)-2-(1,3-thiazolidine-3-carbonyl)-octahydro-1H-indole belongs to the class of organic compounds known as alpha amino acid amides. These are amide derivatives of alpha amino acids. Based on a literature review very few articles have been published on 1-(2-phenylcyclopropanecarbonyl)-2-(1,3-thiazolidine-3-carbonyl)-octahydro-1H-indole. This compound has been identified in human blood as reported by (PMID: 31557052 ). [(2s,3as,7as)-octahydro-1-[[(1r,2r)-2-phenylcyclopropyl]carbonyl]-1h-indol-2-yl]-3-thiazolidinyl--methanone is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically [(2S,3As,7aS)-Octahydro-1-[[(1R,2R)-2-phenylcyclopropyl]carbonyl]-1H-indol-2-yl]-3-thiazolidinyl--methanone is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
(2S,3AS,7as)-1-(((R,R)-2-phenylcyclopropyl)carbonyl)-2-((thiazolidin-3-yl)carbonyl)octahydro-1H-indoleMeSH
Chemical FormulaC22H28N2O2S
Average Molecular Weight384.54
Monoisotopic Molecular Weight384.187149324
IUPAC Name1-(2-phenylcyclopropanecarbonyl)-2-(1,3-thiazolidine-3-carbonyl)-octahydro-1H-indole
Traditional Name1-(2-phenylcyclopropanecarbonyl)-2-(1,3-thiazolidine-3-carbonyl)-octahydroindole
CAS Registry NumberNot Available
SMILES
O=C(C1CC1C1=CC=CC=C1)N1C2CCCCC2CC1C(=O)N1CCSC1
InChI Identifier
InChI=1S/C22H28N2O2S/c25-21(18-13-17(18)15-6-2-1-3-7-15)24-19-9-5-4-8-16(19)12-20(24)22(26)23-10-11-27-14-23/h1-3,6-7,16-20H,4-5,8-14H2
InChI KeyNXSXRIHXEQSYEZ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alpha amino acid amides. These are amide derivatives of alpha amino acids.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentAlpha amino acid amides
Alternative Parents
Substituents
  • Alpha-amino acid amide
  • Indole or derivatives
  • N-acylpyrrolidine
  • Pyrrolidine carboxylic acid or derivatives
  • Pyrrolidine-2-carboxamide
  • Monocyclic benzene moiety
  • Cyclopropanecarboxylic acid or derivatives
  • Benzenoid
  • Pyrrolidine
  • Tertiary carboxylic acid amide
  • Thiazolidine
  • Carboxamide group
  • Dialkylthioether
  • Organoheterocyclic compound
  • Azacycle
  • Thioether
  • Hemithioaminal
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.27ALOGPS
logP2.9ChemAxon
logS-4.5ALOGPS
pKa (Strongest Acidic)19.78ChemAxon
pKa (Strongest Basic)-0.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area40.62 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity107.8 m³·mol⁻¹ChemAxon
Polarizability42.74 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+187.76230932474
DeepCCS[M-H]-185.35130932474
DeepCCS[M-2H]-219.69730932474
DeepCCS[M+Na]+194.92330932474
AllCCS[M+H]+192.132859911
AllCCS[M+H-H2O]+189.732859911
AllCCS[M+NH4]+194.232859911
AllCCS[M+Na]+194.832859911
AllCCS[M-H]-186.832859911
AllCCS[M+Na-2H]-187.032859911
AllCCS[M+HCOO]-187.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
[(2S,3As,7aS)-Octahydro-1-[[(1R,2R)-2-phenylcyclopropyl]carbonyl]-1H-indol-2-yl]-3-thiazolidinyl--methanoneO=C(C1CC1C1=CC=CC=C1)N1C2CCCCC2CC1C(=O)N1CCSC14036.8Standard polar33892256
[(2S,3As,7aS)-Octahydro-1-[[(1R,2R)-2-phenylcyclopropyl]carbonyl]-1H-indol-2-yl]-3-thiazolidinyl--methanoneO=C(C1CC1C1=CC=CC=C1)N1C2CCCCC2CC1C(=O)N1CCSC13307.7Standard non polar33892256
[(2S,3As,7aS)-Octahydro-1-[[(1R,2R)-2-phenylcyclopropyl]carbonyl]-1H-indol-2-yl]-3-thiazolidinyl--methanoneO=C(C1CC1C1=CC=CC=C1)N1C2CCCCC2CC1C(=O)N1CCSC13292.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - [(2S,3As,7aS)-Octahydro-1-[[(1R,2R)-2-phenylcyclopropyl]carbonyl]-1H-indol-2-yl]-3-thiazolidinyl--methanone GC-MS (Non-derivatized) - 70eV, Positivesplash10-014l-9782000000-85346addd02eff72a6162021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - [(2S,3As,7aS)-Octahydro-1-[[(1R,2R)-2-phenylcyclopropyl]carbonyl]-1H-indol-2-yl]-3-thiazolidinyl--methanone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID14272489
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound20096479
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]