Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 19:27:29 UTC
Update Date2021-09-26 23:14:58 UTC
HMDB IDHMDB0258214
Secondary Accession NumbersNone
Metabolite Identification
Common NameSeletalisib
Description3-{8-chloro-3-[2,2,2-trifluoro-1-({pyrido[3,2-d]pyrimidin-4-yl}amino)ethyl]quinolin-2-yl}-1λ⁵-pyridin-1-one belongs to the class of organic compounds known as bipyridines and oligopyridines. These are organic compounds containing two pyridine rings linked to each other. Based on a literature review very few articles have been published on 3-{8-chloro-3-[2,2,2-trifluoro-1-({pyrido[3,2-d]pyrimidin-4-yl}amino)ethyl]quinolin-2-yl}-1λ⁵-pyridin-1-one. This compound has been identified in human blood as reported by (PMID: 31557052 ). Seletalisib is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Seletalisib is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC23H14ClF3N6O
Average Molecular Weight482.85
Monoisotopic Molecular Weight482.0869713
IUPAC Name3-{8-chloro-3-[2,2,2-trifluoro-1-({pyrido[3,2-d]pyrimidin-4-yl}amino)ethyl]quinolin-2-yl}pyridin-1-ium-1-olate
Traditional Name3-[8-chloro-3-(2,2,2-trifluoro-1-{pyrido[3,2-d]pyrimidin-4-ylamino}ethyl)quinolin-2-yl]pyridin-1-ium-1-olate
CAS Registry NumberNot Available
SMILES
[O-][N+]1=CC=CC(=C1)C1=C(C=C2C=CC=C(Cl)C2=N1)C(NC1=NC=NC2=C1N=CC=C2)C(F)(F)F
InChI Identifier
InChI=1S/C23H14ClF3N6O/c24-16-6-1-4-13-10-15(18(31-19(13)16)14-5-3-9-33(34)11-14)21(23(25,26)27)32-22-20-17(29-12-30-22)7-2-8-28-20/h1-12,21H,(H,29,30,32)
InChI KeyLNLJHGXOFYUARS-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as bipyridines and oligopyridines. These are organic compounds containing two pyridine rings linked to each other.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyridines and derivatives
Sub ClassBipyridines and oligopyridines
Direct ParentBipyridines and oligopyridines
Alternative Parents
Substituents
  • Bipyridine
  • Haloquinoline
  • Chloroquinoline
  • Quinoline
  • Pyridopyrimidine
  • Secondary aliphatic/aromatic amine
  • Aminopyrimidine
  • Imidolactam
  • Benzenoid
  • Pyrimidine
  • Pyridinium
  • Aryl halide
  • Aryl chloride
  • Heteroaromatic compound
  • Azacycle
  • Secondary amine
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Organofluoride
  • Organochloride
  • Organohalogen compound
  • Amine
  • Alkyl halide
  • Alkyl fluoride
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP4.34ALOGPS
logP3.72ChemAxon
logS-4.9ALOGPS
pKa (Strongest Acidic)10.71ChemAxon
pKa (Strongest Basic)5.09ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area90.53 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity121.16 m³·mol⁻¹ChemAxon
Polarizability43.95 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+197.98430932474
DeepCCS[M-H]-195.58930932474
DeepCCS[M-2H]-228.9930932474
DeepCCS[M+Na]+204.03130932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Seletalisib[O-][N+]1=CC=CC(=C1)C1=C(C=C2C=CC=C(Cl)C2=N1)C(NC1=NC=NC2=C1N=CC=C2)C(F)(F)F4591.4Standard polar33892256
Seletalisib[O-][N+]1=CC=CC(=C1)C1=C(C=C2C=CC=C(Cl)C2=N1)C(NC1=NC=NC2=C1N=CC=C2)C(F)(F)F3653.7Standard non polar33892256
Seletalisib[O-][N+]1=CC=CC(=C1)C1=C(C=C2C=CC=C(Cl)C2=N1)C(NC1=NC=NC2=C1N=CC=C2)C(F)(F)F4300.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Seletalisib,1TMS,isomer #1C[Si](C)(C)N(C1=NC=NC2=CC=CN=C12)C(C1=CC2=CC=CC(Cl)=C2N=C1C1=CC=C[N+]([O-])=C1)C(F)(F)F3630.4Semi standard non polar33892256
Seletalisib,1TMS,isomer #1C[Si](C)(C)N(C1=NC=NC2=CC=CN=C12)C(C1=CC2=CC=CC(Cl)=C2N=C1C1=CC=C[N+]([O-])=C1)C(F)(F)F3391.4Standard non polar33892256
Seletalisib,1TMS,isomer #1C[Si](C)(C)N(C1=NC=NC2=CC=CN=C12)C(C1=CC2=CC=CC(Cl)=C2N=C1C1=CC=C[N+]([O-])=C1)C(F)(F)F4729.3Standard polar33892256
Seletalisib,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1=NC=NC2=CC=CN=C12)C(C1=CC2=CC=CC(Cl)=C2N=C1C1=CC=C[N+]([O-])=C1)C(F)(F)F3847.9Semi standard non polar33892256
Seletalisib,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1=NC=NC2=CC=CN=C12)C(C1=CC2=CC=CC(Cl)=C2N=C1C1=CC=C[N+]([O-])=C1)C(F)(F)F3593.9Standard non polar33892256
Seletalisib,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)N(C1=NC=NC2=CC=CN=C12)C(C1=CC2=CC=CC(Cl)=C2N=C1C1=CC=C[N+]([O-])=C1)C(F)(F)F4701.7Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Seletalisib GC-MS (Non-derivatized) - 70eV, Positivesplash10-03di-2305900000-478b75ced219b7413f952021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Seletalisib GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID64880333
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound76460864
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]