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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 22:46:04 UTC
Update Date2021-09-26 23:17:38 UTC
HMDB IDHMDB0259832
Secondary Accession NumbersNone
Metabolite Identification
Common NameVipadenant
DescriptionVipadenant belongs to the class of organic compounds known as triazolopyrimidines. These are polycyclic aromatic compounds containing triazole ring fused to a pyrimidine ring. Triazole is a five-membered ring consisting of two carbon atoms and three nitrogen atoms. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions. Based on a literature review a significant number of articles have been published on Vipadenant. This compound has been identified in human blood as reported by (PMID: 31557052 ). Vipadenant is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Vipadenant is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
BIIB014ChEMBL, MeSH
V2006ChEMBL
V2006 CPDMeSH
3-(4-amino-3-Methylbenzyl)-7-(2-furyl)-3H-(1,2,3)triazolo(4,5-D)pyrimidine-5-amineMeSH
Chemical FormulaC16H15N7O
Average Molecular Weight321.344
Monoisotopic Molecular Weight321.133808131
IUPAC Name3-[(4-amino-3-methylphenyl)methyl]-7-(furan-2-yl)-3H-[1,2,3]triazolo[4,5-d]pyrimidin-5-amine
Traditional Name3-[(4-amino-3-methylphenyl)methyl]-7-(furan-2-yl)-[1,2,3]triazolo[4,5-d]pyrimidin-5-amine
CAS Registry NumberNot Available
SMILES
CC1=CC(CN2N=NC3=C(N=C(N)N=C23)C2=CC=CO2)=CC=C1N
InChI Identifier
InChI=1S/C16H15N7O/c1-9-7-10(4-5-11(9)17)8-23-15-14(21-22-23)13(19-16(18)20-15)12-3-2-6-24-12/h2-7H,8,17H2,1H3,(H2,18,19,20)
InChI KeyHQSBCDPYXDGTCL-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triazolopyrimidines. These are polycyclic aromatic compounds containing triazole ring fused to a pyrimidine ring. Triazole is a five-membered ring consisting of two carbon atoms and three nitrogen atoms. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassTriazolopyrimidines
Sub ClassNot Available
Direct ParentTriazolopyrimidines
Alternative Parents
Substituents
  • Triazolopyrimidine
  • Aminotoluene
  • Aniline or substituted anilines
  • Aminopyrimidine
  • Toluene
  • Monocyclic benzene moiety
  • Pyrimidine
  • Benzenoid
  • Azole
  • Furan
  • Heteroaromatic compound
  • Triazole
  • 1,2,3-triazole
  • Oxacycle
  • Azacycle
  • Hydrocarbon derivative
  • Primary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Organic nitrogen compound
  • Amine
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP1.51ALOGPS
logP2.22ChemAxon
logS-3.2ALOGPS
pKa (Strongest Acidic)15.78ChemAxon
pKa (Strongest Basic)4.16ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area121.67 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity102.05 m³·mol⁻¹ChemAxon
Polarizability33.07 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+176.9532859911
AllCCS[M+H-H2O]+173.63232859911
AllCCS[M+Na]+180.90632859911
AllCCS[M+NH4]+180.02332859911
AllCCS[M-H]-178.61632859911
AllCCS[M+Na-2H]-178.01832859911
AllCCS[M+HCOO]-177.49532859911
DeepCCS[M-2H]-205.12630932474
DeepCCS[M+Na]+180.35330932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
VipadenantCC1=CC(CN2N=NC3=C(N=C(N)N=C23)C2=CC=CO2)=CC=C1N3827.9Standard polar33892256
VipadenantCC1=CC(CN2N=NC3=C(N=C(N)N=C23)C2=CC=CO2)=CC=C1N3237.5Standard non polar33892256
VipadenantCC1=CC(CN2N=NC3=C(N=C(N)N=C23)C2=CC=CO2)=CC=C1N3232.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Vipadenant,1TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N3397.4Semi standard non polar33892256
Vipadenant,1TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N3247.9Standard non polar33892256
Vipadenant,1TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N5354.7Standard polar33892256
Vipadenant,1TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N[Si](C)(C)C3434.7Semi standard non polar33892256
Vipadenant,1TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N[Si](C)(C)C3182.9Standard non polar33892256
Vipadenant,1TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N[Si](C)(C)C4990.7Standard polar33892256
Vipadenant,2TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N[Si](C)(C)C3436.9Semi standard non polar33892256
Vipadenant,2TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N[Si](C)(C)C3190.7Standard non polar33892256
Vipadenant,2TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N[Si](C)(C)C4668.2Standard polar33892256
Vipadenant,2TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N3287.8Semi standard non polar33892256
Vipadenant,2TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N3301.9Standard non polar33892256
Vipadenant,2TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N4993.2Standard polar33892256
Vipadenant,2TMS,isomer #3CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C3271.9Semi standard non polar33892256
Vipadenant,2TMS,isomer #3CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C3149.2Standard non polar33892256
Vipadenant,2TMS,isomer #3CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C4623.6Standard polar33892256
Vipadenant,3TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N[Si](C)(C)C3382.9Semi standard non polar33892256
Vipadenant,3TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N[Si](C)(C)C3253.9Standard non polar33892256
Vipadenant,3TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N[Si](C)(C)C4303.0Standard polar33892256
Vipadenant,3TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C3295.1Semi standard non polar33892256
Vipadenant,3TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C3144.5Standard non polar33892256
Vipadenant,3TMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C4287.9Standard polar33892256
Vipadenant,4TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C3305.8Semi standard non polar33892256
Vipadenant,4TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C3212.7Standard non polar33892256
Vipadenant,4TMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C)[Si](C)(C)C)N=C32)=CC=C1N([Si](C)(C)C)[Si](C)(C)C3960.4Standard polar33892256
Vipadenant,1TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N3571.5Semi standard non polar33892256
Vipadenant,1TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N3392.5Standard non polar33892256
Vipadenant,1TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N5259.1Standard polar33892256
Vipadenant,1TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C3666.8Semi standard non polar33892256
Vipadenant,1TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C3326.4Standard non polar33892256
Vipadenant,1TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C4953.4Standard polar33892256
Vipadenant,2TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C3811.1Semi standard non polar33892256
Vipadenant,2TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C3484.9Standard non polar33892256
Vipadenant,2TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C4623.0Standard polar33892256
Vipadenant,2TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N3635.1Semi standard non polar33892256
Vipadenant,2TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N3592.7Standard non polar33892256
Vipadenant,2TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N4823.6Standard polar33892256
Vipadenant,2TBDMS,isomer #3CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3617.3Semi standard non polar33892256
Vipadenant,2TBDMS,isomer #3CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3425.5Standard non polar33892256
Vipadenant,2TBDMS,isomer #3CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C4567.0Standard polar33892256
Vipadenant,3TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C3877.7Semi standard non polar33892256
Vipadenant,3TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C3694.8Standard non polar33892256
Vipadenant,3TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N[Si](C)(C)C(C)(C)C4350.6Standard polar33892256
Vipadenant,3TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3810.2Semi standard non polar33892256
Vipadenant,3TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3575.7Standard non polar33892256
Vipadenant,3TBDMS,isomer #2CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C4347.5Standard polar33892256
Vipadenant,4TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3953.3Semi standard non polar33892256
Vipadenant,4TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3775.7Standard non polar33892256
Vipadenant,4TBDMS,isomer #1CC1=CC(CN2N=NC3=C(C4=CC=CO4)N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N=C32)=CC=C1N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C4127.2Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Vipadenant GC-MS (Non-derivatized) - 70eV, Positivesplash10-00xr-1961000000-f5c84a285c16832857cd2017-08-28Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Vipadenant GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vipadenant 10V, Positive-QTOFsplash10-00di-0109000000-60389c525df3e506ffc82017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vipadenant 20V, Positive-QTOFsplash10-00di-0933000000-6375f8931dff6fa5f9d62017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vipadenant 40V, Positive-QTOFsplash10-006x-8900000000-d63cd2d399add7fdd4602017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vipadenant 10V, Negative-QTOFsplash10-0uk9-0094000000-93e6046d7049c8556cf12017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vipadenant 20V, Negative-QTOFsplash10-0fk9-2197000000-9d0781138d00d00f2fe52017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Vipadenant 40V, Negative-QTOFsplash10-00di-3920000000-9dfb62798c2433f974792017-07-26Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB06625
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID10620930
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]