Showing metabocard for Vitamin D3 palmitic acid (HMDB0259847)
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Version | 5.0 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Status | Detected but not Quantified | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Creation Date | 2021-09-11 22:47:18 UTC | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Update Date | 2022-11-23 22:29:21 UTC | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HMDB ID | HMDB0259847 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Secondary Accession Numbers | None | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Metabolite Identification | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Common Name | Vitamin D3 palmitic acid | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | 3-{2-[7a-methyl-1-(6-methylheptan-2-yl)-octahydro-1H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexyl hexadecanoate belongs to the class of organic compounds known as vitamin d and derivatives. Vitamin D and derivatives are compounds containing a secosteroid backbone, usually secoergostane or secocholestane. Based on a literature review very few articles have been published on 3-{2-[7a-methyl-1-(6-methylheptan-2-yl)-octahydro-1H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexyl hexadecanoate. This compound has been identified in human blood as reported by (PMID: 31557052 ). Vitamin d3 palmitic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Vitamin D3 palmitic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Structure | MOL for HMDB0259847 (Vitamin D3 palmitic acid)Mrv1652309122100472D 45 47 0 0 0 0 999 V2000 6.4302 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.1447 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.8592 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 8.5737 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 9.2881 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 10.0026 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 10.7171 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 11.4315 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 12.1460 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 12.8605 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 13.5749 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 14.2894 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 15.0039 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 15.7184 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 16.4328 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 17.1473 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 17.1473 -11.5500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 17.8618 -12.7875 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 18.5762 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 18.5762 -11.5500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 19.2907 -11.1375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.0052 -11.5500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.7197 -11.1375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.0052 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.7197 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 21.4341 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.1486 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.8631 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.5775 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.5775 -13.6125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.8631 -14.0250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.1486 -13.6125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 21.5355 -14.1645 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 21.8711 -14.9182 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.6915 -14.8320 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.2436 -15.4451 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.9886 -16.2297 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 24.0505 -15.2735 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 24.6026 -15.8866 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 25.4096 -15.7151 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 25.9616 -16.3282 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 26.7686 -16.1567 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 25.7066 -17.1128 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.5305 -14.5099 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 19.2907 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 4 5 1 0 0 0 0 5 6 1 0 0 0 0 6 7 1 0 0 0 0 7 8 1 0 0 0 0 8 9 1 0 0 0 0 9 10 1 0 0 0 0 10 11 1 0 0 0 0 11 12 1 0 0 0 0 12 13 1 0 0 0 0 13 14 1 0 0 0 0 14 15 1 0 0 0 0 15 16 1 0 0 0 0 16 17 2 0 0 0 0 16 18 1 0 0 0 0 18 19 1 0 0 0 0 19 20 1 0 0 0 0 20 21 1 0 0 0 0 21 22 1 0 0 0 0 22 23 2 0 0 0 0 22 24 1 0 0 0 0 24 25 2 0 0 0 0 25 26 1 4 0 0 0 26 27 2 0 0 0 0 27 28 1 4 0 0 0 28 29 1 0 0 0 0 29 30 1 0 0 0 0 30 31 1 0 0 0 0 31 32 1 0 0 0 0 27 32 1 0 0 0 0 32 33 1 0 0 0 0 33 34 1 0 0 0 0 34 35 1 0 0 0 0 31 35 1 0 0 0 0 35 36 1 0 0 0 0 36 37 1 0 0 0 0 36 38 1 0 0 0 0 38 39 1 0 0 0 0 39 40 1 0 0 0 0 40 41 1 0 0 0 0 41 42 1 0 0 0 0 41 43 1 0 0 0 0 31 44 1 0 0 0 0 24 45 1 0 0 0 0 19 45 1 0 0 0 0 M END 3D MOL for HMDB0259847 (Vitamin D3 palmitic acid)HMDB0259847 RDKit 3D Vitamin D3 palmitate 119121 0 0 0 0 0 0 0 0999 V2000 -3.0760 -5.3913 -0.8806 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.1483 -4.7074 -0.2965 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.6880 -5.1134 -0.4508 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.1970 -5.3659 0.9712 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4099 -4.1660 1.8521 C 0 0 0 0 0 0 0 0 0 0 0 0 0.6886 -3.2653 1.6768 O 0 0 0 0 0 0 0 0 0 0 0 0 1.6385 -3.0743 2.6512 C 0 0 0 0 0 0 0 0 0 0 0 0 1.4943 -3.6902 3.7352 O 0 0 0 0 0 0 0 0 0 0 0 0 2.8441 -2.1650 2.4604 C 0 0 0 0 0 0 0 0 0 0 0 0 3.9587 -3.1833 2.2271 C 0 0 0 0 0 0 0 0 0 0 0 0 5.3038 -2.6511 1.9650 C 0 0 0 0 0 0 0 0 0 0 0 0 5.4307 -1.7846 0.7368 C 0 0 0 0 0 0 0 0 0 0 0 0 6.8692 -1.4041 0.5540 C 0 0 0 0 0 0 0 0 0 0 0 0 7.4747 -0.6277 1.6696 C 0 0 0 0 0 0 0 0 0 0 0 0 8.9535 -0.3419 1.3961 C 0 0 0 0 0 0 0 0 0 0 0 0 9.1363 0.4487 0.1387 C 0 0 0 0 0 0 0 0 0 0 0 0 10.6234 0.6829 -0.0739 C 0 0 0 0 0 0 0 0 0 0 0 0 11.2748 1.4424 1.0337 C 0 0 0 0 0 0 0 0 0 0 0 0 12.7227 1.6322 0.8089 C 0 0 0 0 0 0 0 0 0 0 0 0 13.2125 2.3061 -0.3879 C 0 0 0 0 0 0 0 0 0 0 0 0 12.8816 3.6953 -0.7272 C 0 0 0 0 0 0 0 0 0 0 0 0 11.4685 4.0069 -1.0224 C 0 0 0 0 0 0 0 0 0 0 0 0 11.3178 5.4921 -1.3951 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.6811 -3.4498 1.8278 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.4390 -3.5842 0.5584 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.3291 -2.6904 0.1706 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.0940 -2.6177 -1.0192 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.0266 -1.6972 -1.2828 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6839 -1.8333 -2.6069 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.1656 -2.0000 -2.3894 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.6689 -1.3218 -1.1078 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.8723 -0.1217 -0.7726 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.6249 0.7908 -1.9243 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4819 -0.6998 -0.3670 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7894 0.5378 -0.0286 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.9125 1.4517 0.5874 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.1308 0.5824 0.5133 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.4242 0.9493 0.9853 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.1722 1.6425 2.3864 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.5982 1.4643 0.3688 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.1654 2.5775 -0.3059 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.7075 3.3452 -1.4651 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.8463 4.5407 -1.2684 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.5792 4.3549 -0.5476 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.6282 5.2423 -2.6159 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8626 -6.2691 -1.5005 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1285 -5.1742 -0.7638 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1154 -4.3809 -1.0076 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7001 -6.0721 -0.9854 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7320 -6.2304 1.3905 H 0 0 0 0 0 0 0 0 0 0 0 0 0.8928 -5.5427 0.8932 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2754 -4.5922 2.9122 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6885 -1.5950 1.5366 H 0 0 0 0 0 0 0 0 0 0 0 0 3.0164 -1.5624 3.3461 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6328 -3.8628 1.3814 H 0 0 0 0 0 0 0 0 0 0 0 0 3.9878 -3.8029 3.1539 H 0 0 0 0 0 0 0 0 0 0 0 0 5.6452 -2.1239 2.8821 H 0 0 0 0 0 0 0 0 0 0 0 0 5.9953 -3.5097 1.8327 H 0 0 0 0 0 0 0 0 0 0 0 0 4.7980 -0.8729 0.8050 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1081 -2.3321 -0.1782 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9871 -0.8393 -0.4125 H 0 0 0 0 0 0 0 0 0 0 0 0 7.4643 -2.3540 0.4340 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9704 0.3326 1.8442 H 0 0 0 0 0 0 0 0 0 0 0 0 7.4203 -1.2012 2.6343 H 0 0 0 0 0 0 0 0 0 0 0 0 9.5039 -1.3183 1.2576 H 0 0 0 0 0 0 0 0 0 0 0 0 9.3163 0.2017 2.2657 H 0 0 0 0 0 0 0 0 0 0 0 0 8.5678 1.3870 0.1310 H 0 0 0 0 0 0 0 0 0 0 0 0 8.8255 -0.1937 -0.7259 H 0 0 0 0 0 0 0 0 0 0 0 0 10.7351 1.1956 -1.0340 H 0 0 0 0 0 0 0 0 0 0 0 0 11.1084 -0.3186 -0.1365 H 0 0 0 0 0 0 0 0 0 0 0 0 10.7781 2.3502 1.3541 H 0 0 0 0 0 0 0 0 0 0 0 0 11.2158 0.7888 1.9937 H 0 0 0 0 0 0 0 0 0 0 0 0 13.1247 2.1924 1.7196 H 0 0 0 0 0 0 0 0 0 0 0 0 13.2285 0.6213 0.9031 H 0 0 0 0 0 0 0 0 0 0 0 0 14.3723 2.2858 -0.3180 H 0 0 0 0 0 0 0 0 0 0 0 0 13.0699 1.6180 -1.3054 H 0 0 0 0 0 0 0 0 0 0 0 0 13.2478 4.3832 0.1029 H 0 0 0 0 0 0 0 0 0 0 0 0 13.4794 4.0659 -1.6263 H 0 0 0 0 0 0 0 0 0 0 0 0 11.1054 3.3864 -1.8732 H 0 0 0 0 0 0 0 0 0 0 0 0 10.7970 3.8683 -0.1755 H 0 0 0 0 0 0 0 0 0 0 0 0 11.5925 6.1029 -0.5185 H 0 0 0 0 0 0 0 0 0 0 0 0 10.2799 5.6823 -1.6777 H 0 0 0 0 0 0 0 0 0 0 0 0 11.9787 5.7333 -2.2350 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3287 -3.8285 2.6750 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.5255 -2.3383 1.9799 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4943 -1.8848 0.9069 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.9107 -3.3291 -1.8481 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3719 -2.8356 -3.0762 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.4741 -1.0325 -3.3100 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.4949 -3.0613 -2.4219 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6860 -1.4932 -3.2319 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6322 -2.1228 -0.3364 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.7140 -1.0363 -1.3337 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.0052 1.8262 -1.7373 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.1824 0.4651 -2.8445 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.5810 0.9404 -2.2329 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.7354 -1.1958 0.6483 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1139 0.3595 0.8682 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2360 1.0625 -0.8043 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.8645 2.3217 -0.0365 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6498 1.7274 1.6332 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7724 -0.2652 1.2934 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.8394 -0.0799 1.4728 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5434 2.5119 2.2911 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5474 0.8721 2.9229 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.1126 1.7283 2.9293 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.0566 0.5369 -0.3049 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.5068 1.2437 1.1971 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.4589 3.4305 0.4661 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.3038 2.3367 -0.5896 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.1633 2.6177 -2.1708 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.5739 3.6486 -2.1530 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.4624 5.3020 -0.6672 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6778 3.6816 0.3130 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7874 4.0853 -1.2501 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.2354 5.3413 -0.0686 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.8739 6.0136 -2.4770 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.3807 4.4644 -3.3632 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.5770 5.6999 -2.9416 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 3 2 3 1 0 3 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 7 8 2 0 7 9 1 0 9 10 1 0 10 11 1 0 11 12 1 0 12 13 1 0 13 14 1 0 14 15 1 0 15 16 1 0 16 17 1 0 17 18 1 0 18 19 1 0 19 20 1 0 20 21 1 0 21 22 1 0 22 23 1 0 5 24 1 0 24 25 1 0 25 26 2 3 26 27 1 0 27 28 2 3 28 29 1 0 29 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 32 34 1 0 34 35 1 0 35 36 1 0 36 37 1 0 37 38 1 0 38 39 1 0 38 40 1 0 40 41 1 0 41 42 1 0 42 43 1 0 43 44 1 0 43 45 1 0 25 2 1 0 34 28 1 0 37 32 1 0 1 46 1 0 1 47 1 0 3 48 1 0 3 49 1 0 4 50 1 0 4 51 1 0 5 52 1 0 9 53 1 0 9 54 1 0 10 55 1 0 10 56 1 0 11 57 1 0 11 58 1 0 12 59 1 0 12 60 1 0 13 61 1 0 13 62 1 0 14 63 1 0 14 64 1 0 15 65 1 0 15 66 1 0 16 67 1 0 16 68 1 0 17 69 1 0 17 70 1 0 18 71 1 0 18 72 1 0 19 73 1 0 19 74 1 0 20 75 1 0 20 76 1 0 21 77 1 0 21 78 1 0 22 79 1 0 22 80 1 0 23 81 1 0 23 82 1 0 23 83 1 0 24 84 1 0 24 85 1 0 26 86 1 0 27 87 1 0 29 88 1 0 29 89 1 0 30 90 1 0 30 91 1 0 31 92 1 0 31 93 1 0 33 94 1 0 33 95 1 0 33 96 1 0 34 97 1 0 35 98 1 0 35 99 1 0 36100 1 0 36101 1 0 37102 1 0 38103 1 0 39104 1 0 39105 1 0 39106 1 0 40107 1 0 40108 1 0 41109 1 0 41110 1 0 42111 1 0 42112 1 0 43113 1 0 44114 1 0 44115 1 0 44116 1 0 45117 1 0 45118 1 0 45119 1 0 M END 3D SDF for HMDB0259847 (Vitamin D3 palmitic acid)Mrv1652309122100472D 45 47 0 0 0 0 999 V2000 6.4302 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.1447 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.8592 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 8.5737 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 9.2881 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 10.0026 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 10.7171 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 11.4315 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 12.1460 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 12.8605 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 13.5749 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 14.2894 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 15.0039 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 15.7184 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 16.4328 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 17.1473 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 17.1473 -11.5500 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 17.8618 -12.7875 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 18.5762 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 18.5762 -11.5500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 19.2907 -11.1375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.0052 -11.5500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.7197 -11.1375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.0052 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 20.7197 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 21.4341 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.1486 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.8631 -12.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.5775 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.5775 -13.6125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.8631 -14.0250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.1486 -13.6125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 21.5355 -14.1645 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 21.8711 -14.9182 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.6915 -14.8320 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.2436 -15.4451 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 22.9886 -16.2297 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 24.0505 -15.2735 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 24.6026 -15.8866 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 25.4096 -15.7151 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 25.9616 -16.3282 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 26.7686 -16.1567 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 25.7066 -17.1128 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 23.5305 -14.5099 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 19.2907 -12.7875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 4 5 1 0 0 0 0 5 6 1 0 0 0 0 6 7 1 0 0 0 0 7 8 1 0 0 0 0 8 9 1 0 0 0 0 9 10 1 0 0 0 0 10 11 1 0 0 0 0 11 12 1 0 0 0 0 12 13 1 0 0 0 0 13 14 1 0 0 0 0 14 15 1 0 0 0 0 15 16 1 0 0 0 0 16 17 2 0 0 0 0 16 18 1 0 0 0 0 18 19 1 0 0 0 0 19 20 1 0 0 0 0 20 21 1 0 0 0 0 21 22 1 0 0 0 0 22 23 2 0 0 0 0 22 24 1 0 0 0 0 24 25 2 0 0 0 0 25 26 1 4 0 0 0 26 27 2 0 0 0 0 27 28 1 4 0 0 0 28 29 1 0 0 0 0 29 30 1 0 0 0 0 30 31 1 0 0 0 0 31 32 1 0 0 0 0 27 32 1 0 0 0 0 32 33 1 0 0 0 0 33 34 1 0 0 0 0 34 35 1 0 0 0 0 31 35 1 0 0 0 0 35 36 1 0 0 0 0 36 37 1 0 0 0 0 36 38 1 0 0 0 0 38 39 1 0 0 0 0 39 40 1 0 0 0 0 40 41 1 0 0 0 0 41 42 1 0 0 0 0 41 43 1 0 0 0 0 31 44 1 0 0 0 0 24 45 1 0 0 0 0 19 45 1 0 0 0 0 M END > <DATABASE_ID> HMDB0259847 > <DATABASE_NAME> hmdb > <SMILES> CCCCCCCCCCCCCCCC(=O)OC1CCC(=C)C(C1)=CC=C1CCCC2(C)C(CCC12)C(C)CCCC(C)C > <INCHI_IDENTIFIER> InChI=1S/C43H74O2/c1-7-8-9-10-11-12-13-14-15-16-17-18-19-25-42(44)45-39-29-26-35(4)38(33-39)28-27-37-24-21-32-43(6)40(30-31-41(37)43)36(5)23-20-22-34(2)3/h27-28,34,36,39-41H,4,7-26,29-33H2,1-3,5-6H3 > <INCHI_KEY> FURKZYNGFYQYCT-UHFFFAOYSA-N > <FORMULA> C43H74O2 > <MOLECULAR_WEIGHT> 623.063 > <EXACT_MASS> 622.568881623 > <JCHEM_ACCEPTOR_COUNT> 1 > <JCHEM_ATOM_COUNT> 119 > <JCHEM_AVERAGE_POLARIZABILITY> 83.20690398423685 > <JCHEM_BIOAVAILABILITY> 0 > <JCHEM_DONOR_COUNT> 0 > <JCHEM_FORMAL_CHARGE> 0 > <JCHEM_GHOSE_FILTER> 0 > <JCHEM_IUPAC> 3-{2-[7a-methyl-1-(6-methylheptan-2-yl)-octahydro-1H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexyl hexadecanoate > <ALOGPS_LOGP> 10.71 > <JCHEM_LOGP> 14.046514656999996 > <ALOGPS_LOGS> -7.32 > <JCHEM_MDDR_LIKE_RULE> 1 > <JCHEM_NUMBER_OF_RINGS> 3 > <JCHEM_PHYSIOLOGICAL_CHARGE> 0 > <JCHEM_PKA_STRONGEST_BASIC> -7.042243442030879 > <JCHEM_POLAR_SURFACE_AREA> 26.3 > <JCHEM_REFRACTIVITY> 196.81590000000006 > <JCHEM_ROTATABLE_BOND_COUNT> 22 > <JCHEM_RULE_OF_FIVE> 0 > <ALOGPS_SOLUBILITY> 2.97e-05 g/l > <JCHEM_TRADITIONAL_IUPAC> 3-{2-[7a-methyl-1-(6-methylheptan-2-yl)-hexahydro-1H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexyl hexadecanoate > <JCHEM_VEBER_RULE> 0 $$$$ 3D-SDF for HMDB0259847 (Vitamin D3 palmitic acid)HMDB0259847 RDKit 3D Vitamin D3 palmitate 119121 0 0 0 0 0 0 0 0999 V2000 -3.0760 -5.3913 -0.8806 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.1483 -4.7074 -0.2965 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.6880 -5.1134 -0.4508 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.1970 -5.3659 0.9712 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4099 -4.1660 1.8521 C 0 0 0 0 0 0 0 0 0 0 0 0 0.6886 -3.2653 1.6768 O 0 0 0 0 0 0 0 0 0 0 0 0 1.6385 -3.0743 2.6512 C 0 0 0 0 0 0 0 0 0 0 0 0 1.4943 -3.6902 3.7352 O 0 0 0 0 0 0 0 0 0 0 0 0 2.8441 -2.1650 2.4604 C 0 0 0 0 0 0 0 0 0 0 0 0 3.9587 -3.1833 2.2271 C 0 0 0 0 0 0 0 0 0 0 0 0 5.3038 -2.6511 1.9650 C 0 0 0 0 0 0 0 0 0 0 0 0 5.4307 -1.7846 0.7368 C 0 0 0 0 0 0 0 0 0 0 0 0 6.8692 -1.4041 0.5540 C 0 0 0 0 0 0 0 0 0 0 0 0 7.4747 -0.6277 1.6696 C 0 0 0 0 0 0 0 0 0 0 0 0 8.9535 -0.3419 1.3961 C 0 0 0 0 0 0 0 0 0 0 0 0 9.1363 0.4487 0.1387 C 0 0 0 0 0 0 0 0 0 0 0 0 10.6234 0.6829 -0.0739 C 0 0 0 0 0 0 0 0 0 0 0 0 11.2748 1.4424 1.0337 C 0 0 0 0 0 0 0 0 0 0 0 0 12.7227 1.6322 0.8089 C 0 0 0 0 0 0 0 0 0 0 0 0 13.2125 2.3061 -0.3879 C 0 0 0 0 0 0 0 0 0 0 0 0 12.8816 3.6953 -0.7272 C 0 0 0 0 0 0 0 0 0 0 0 0 11.4685 4.0069 -1.0224 C 0 0 0 0 0 0 0 0 0 0 0 0 11.3178 5.4921 -1.3951 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.6811 -3.4498 1.8278 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.4390 -3.5842 0.5584 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.3291 -2.6904 0.1706 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.0940 -2.6177 -1.0192 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.0266 -1.6972 -1.2828 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6839 -1.8333 -2.6069 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.1656 -2.0000 -2.3894 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.6689 -1.3218 -1.1078 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.8723 -0.1217 -0.7726 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.6249 0.7908 -1.9243 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4819 -0.6998 -0.3670 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7894 0.5378 -0.0286 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.9125 1.4517 0.5874 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.1308 0.5824 0.5133 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.4242 0.9493 0.9853 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.1722 1.6425 2.3864 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.5982 1.4643 0.3688 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.1654 2.5775 -0.3059 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.7075 3.3452 -1.4651 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.8463 4.5407 -1.2684 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.5792 4.3549 -0.5476 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.6282 5.2423 -2.6159 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8626 -6.2691 -1.5005 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1285 -5.1742 -0.7638 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1154 -4.3809 -1.0076 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7001 -6.0721 -0.9854 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7320 -6.2304 1.3905 H 0 0 0 0 0 0 0 0 0 0 0 0 0.8928 -5.5427 0.8932 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2754 -4.5922 2.9122 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6885 -1.5950 1.5366 H 0 0 0 0 0 0 0 0 0 0 0 0 3.0164 -1.5624 3.3461 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6328 -3.8628 1.3814 H 0 0 0 0 0 0 0 0 0 0 0 0 3.9878 -3.8029 3.1539 H 0 0 0 0 0 0 0 0 0 0 0 0 5.6452 -2.1239 2.8821 H 0 0 0 0 0 0 0 0 0 0 0 0 5.9953 -3.5097 1.8327 H 0 0 0 0 0 0 0 0 0 0 0 0 4.7980 -0.8729 0.8050 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1081 -2.3321 -0.1782 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9871 -0.8393 -0.4125 H 0 0 0 0 0 0 0 0 0 0 0 0 7.4643 -2.3540 0.4340 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9704 0.3326 1.8442 H 0 0 0 0 0 0 0 0 0 0 0 0 7.4203 -1.2012 2.6343 H 0 0 0 0 0 0 0 0 0 0 0 0 9.5039 -1.3183 1.2576 H 0 0 0 0 0 0 0 0 0 0 0 0 9.3163 0.2017 2.2657 H 0 0 0 0 0 0 0 0 0 0 0 0 8.5678 1.3870 0.1310 H 0 0 0 0 0 0 0 0 0 0 0 0 8.8255 -0.1937 -0.7259 H 0 0 0 0 0 0 0 0 0 0 0 0 10.7351 1.1956 -1.0340 H 0 0 0 0 0 0 0 0 0 0 0 0 11.1084 -0.3186 -0.1365 H 0 0 0 0 0 0 0 0 0 0 0 0 10.7781 2.3502 1.3541 H 0 0 0 0 0 0 0 0 0 0 0 0 11.2158 0.7888 1.9937 H 0 0 0 0 0 0 0 0 0 0 0 0 13.1247 2.1924 1.7196 H 0 0 0 0 0 0 0 0 0 0 0 0 13.2285 0.6213 0.9031 H 0 0 0 0 0 0 0 0 0 0 0 0 14.3723 2.2858 -0.3180 H 0 0 0 0 0 0 0 0 0 0 0 0 13.0699 1.6180 -1.3054 H 0 0 0 0 0 0 0 0 0 0 0 0 13.2478 4.3832 0.1029 H 0 0 0 0 0 0 0 0 0 0 0 0 13.4794 4.0659 -1.6263 H 0 0 0 0 0 0 0 0 0 0 0 0 11.1054 3.3864 -1.8732 H 0 0 0 0 0 0 0 0 0 0 0 0 10.7970 3.8683 -0.1755 H 0 0 0 0 0 0 0 0 0 0 0 0 11.5925 6.1029 -0.5185 H 0 0 0 0 0 0 0 0 0 0 0 0 10.2799 5.6823 -1.6777 H 0 0 0 0 0 0 0 0 0 0 0 0 11.9787 5.7333 -2.2350 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3287 -3.8285 2.6750 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.5255 -2.3383 1.9799 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4943 -1.8848 0.9069 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.9107 -3.3291 -1.8481 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3719 -2.8356 -3.0762 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.4741 -1.0325 -3.3100 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.4949 -3.0613 -2.4219 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6860 -1.4932 -3.2319 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6322 -2.1228 -0.3364 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.7140 -1.0363 -1.3337 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.0052 1.8262 -1.7373 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.1824 0.4651 -2.8445 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.5810 0.9404 -2.2329 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.7354 -1.1958 0.6483 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1139 0.3595 0.8682 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2360 1.0625 -0.8043 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.8645 2.3217 -0.0365 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6498 1.7274 1.6332 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7724 -0.2652 1.2934 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.8394 -0.0799 1.4728 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5434 2.5119 2.2911 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5474 0.8721 2.9229 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.1126 1.7283 2.9293 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.0566 0.5369 -0.3049 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.5068 1.2437 1.1971 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.4589 3.4305 0.4661 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.3038 2.3367 -0.5896 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.1633 2.6177 -2.1708 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.5739 3.6486 -2.1530 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.4624 5.3020 -0.6672 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6778 3.6816 0.3130 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7874 4.0853 -1.2501 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.2354 5.3413 -0.0686 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.8739 6.0136 -2.4770 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.3807 4.4644 -3.3632 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.5770 5.6999 -2.9416 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 3 2 3 1 0 3 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 7 8 2 0 7 9 1 0 9 10 1 0 10 11 1 0 11 12 1 0 12 13 1 0 13 14 1 0 14 15 1 0 15 16 1 0 16 17 1 0 17 18 1 0 18 19 1 0 19 20 1 0 20 21 1 0 21 22 1 0 22 23 1 0 5 24 1 0 24 25 1 0 25 26 2 3 26 27 1 0 27 28 2 3 28 29 1 0 29 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 32 34 1 0 34 35 1 0 35 36 1 0 36 37 1 0 37 38 1 0 38 39 1 0 38 40 1 0 40 41 1 0 41 42 1 0 42 43 1 0 43 44 1 0 43 45 1 0 25 2 1 0 34 28 1 0 37 32 1 0 1 46 1 0 1 47 1 0 3 48 1 0 3 49 1 0 4 50 1 0 4 51 1 0 5 52 1 0 9 53 1 0 9 54 1 0 10 55 1 0 10 56 1 0 11 57 1 0 11 58 1 0 12 59 1 0 12 60 1 0 13 61 1 0 13 62 1 0 14 63 1 0 14 64 1 0 15 65 1 0 15 66 1 0 16 67 1 0 16 68 1 0 17 69 1 0 17 70 1 0 18 71 1 0 18 72 1 0 19 73 1 0 19 74 1 0 20 75 1 0 20 76 1 0 21 77 1 0 21 78 1 0 22 79 1 0 22 80 1 0 23 81 1 0 23 82 1 0 23 83 1 0 24 84 1 0 24 85 1 0 26 86 1 0 27 87 1 0 29 88 1 0 29 89 1 0 30 90 1 0 30 91 1 0 31 92 1 0 31 93 1 0 33 94 1 0 33 95 1 0 33 96 1 0 34 97 1 0 35 98 1 0 35 99 1 0 36100 1 0 36101 1 0 37102 1 0 38103 1 0 39104 1 0 39105 1 0 39106 1 0 40107 1 0 40108 1 0 41109 1 0 41110 1 0 42111 1 0 42112 1 0 43113 1 0 44114 1 0 44115 1 0 44116 1 0 45117 1 0 45118 1 0 45119 1 0 M END PDB for HMDB0259847 (Vitamin D3 palmitic acid)HEADER PROTEIN 12-SEP-21 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 12-SEP-21 0 HETATM 1 C UNK 0 12.003 -23.870 0.000 0.00 0.00 C+0 HETATM 2 C UNK 0 13.337 -23.100 0.000 0.00 0.00 C+0 HETATM 3 C UNK 0 14.670 -23.870 0.000 0.00 0.00 C+0 HETATM 4 C UNK 0 16.004 -23.100 0.000 0.00 0.00 C+0 HETATM 5 C UNK 0 17.338 -23.870 0.000 0.00 0.00 C+0 HETATM 6 C UNK 0 18.672 -23.100 0.000 0.00 0.00 C+0 HETATM 7 C UNK 0 20.005 -23.870 0.000 0.00 0.00 C+0 HETATM 8 C UNK 0 21.339 -23.100 0.000 0.00 0.00 C+0 HETATM 9 C UNK 0 22.673 -23.870 0.000 0.00 0.00 C+0 HETATM 10 C UNK 0 24.006 -23.100 0.000 0.00 0.00 C+0 HETATM 11 C UNK 0 25.340 -23.870 0.000 0.00 0.00 C+0 HETATM 12 C UNK 0 26.674 -23.100 0.000 0.00 0.00 C+0 HETATM 13 C UNK 0 28.007 -23.870 0.000 0.00 0.00 C+0 HETATM 14 C UNK 0 29.341 -23.100 0.000 0.00 0.00 C+0 HETATM 15 C UNK 0 30.675 -23.870 0.000 0.00 0.00 C+0 HETATM 16 C UNK 0 32.008 -23.100 0.000 0.00 0.00 C+0 HETATM 17 O UNK 0 32.008 -21.560 0.000 0.00 0.00 O+0 HETATM 18 O UNK 0 33.342 -23.870 0.000 0.00 0.00 O+0 HETATM 19 C UNK 0 34.676 -23.100 0.000 0.00 0.00 C+0 HETATM 20 C UNK 0 34.676 -21.560 0.000 0.00 0.00 C+0 HETATM 21 C UNK 0 36.009 -20.790 0.000 0.00 0.00 C+0 HETATM 22 C UNK 0 37.343 -21.560 0.000 0.00 0.00 C+0 HETATM 23 C UNK 0 38.677 -20.790 0.000 0.00 0.00 C+0 HETATM 24 C UNK 0 37.343 -23.100 0.000 0.00 0.00 C+0 HETATM 25 C UNK 0 38.677 -23.870 0.000 0.00 0.00 C+0 HETATM 26 C UNK 0 40.010 -23.100 0.000 0.00 0.00 C+0 HETATM 27 C UNK 0 41.344 -23.870 0.000 0.00 0.00 C+0 HETATM 28 C UNK 0 42.678 -23.100 0.000 0.00 0.00 C+0 HETATM 29 C UNK 0 44.011 -23.870 0.000 0.00 0.00 C+0 HETATM 30 C UNK 0 44.011 -25.410 0.000 0.00 0.00 C+0 HETATM 31 C UNK 0 42.678 -26.180 0.000 0.00 0.00 C+0 HETATM 32 C UNK 0 41.344 -25.410 0.000 0.00 0.00 C+0 HETATM 33 C UNK 0 40.200 -26.440 0.000 0.00 0.00 C+0 HETATM 34 C UNK 0 40.826 -27.847 0.000 0.00 0.00 C+0 HETATM 35 C UNK 0 42.358 -27.686 0.000 0.00 0.00 C+0 HETATM 36 C UNK 0 43.388 -28.831 0.000 0.00 0.00 C+0 HETATM 37 C UNK 0 42.912 -30.295 0.000 0.00 0.00 C+0 HETATM 38 C UNK 0 44.894 -28.511 0.000 0.00 0.00 C+0 HETATM 39 C UNK 0 45.925 -29.655 0.000 0.00 0.00 C+0 HETATM 40 C UNK 0 47.431 -29.335 0.000 0.00 0.00 C+0 HETATM 41 C UNK 0 48.462 -30.479 0.000 0.00 0.00 C+0 HETATM 42 C UNK 0 49.968 -30.159 0.000 0.00 0.00 C+0 HETATM 43 C UNK 0 47.986 -31.944 0.000 0.00 0.00 C+0 HETATM 44 C UNK 0 43.924 -27.085 0.000 0.00 0.00 C+0 HETATM 45 C UNK 0 36.009 -23.870 0.000 0.00 0.00 C+0 CONECT 1 2 CONECT 2 1 3 CONECT 3 2 4 CONECT 4 3 5 CONECT 5 4 6 CONECT 6 5 7 CONECT 7 6 8 CONECT 8 7 9 CONECT 9 8 10 CONECT 10 9 11 CONECT 11 10 12 CONECT 12 11 13 CONECT 13 12 14 CONECT 14 13 15 CONECT 15 14 16 CONECT 16 15 17 18 CONECT 17 16 CONECT 18 16 19 CONECT 19 18 20 45 CONECT 20 19 21 CONECT 21 20 22 CONECT 22 21 23 24 CONECT 23 22 CONECT 24 22 25 45 CONECT 25 24 26 CONECT 26 25 27 CONECT 27 26 28 32 CONECT 28 27 29 CONECT 29 28 30 CONECT 30 29 31 CONECT 31 30 32 35 44 CONECT 32 31 27 33 CONECT 33 32 34 CONECT 34 33 35 CONECT 35 34 31 36 CONECT 36 35 37 38 CONECT 37 36 CONECT 38 36 39 CONECT 39 38 40 CONECT 40 39 41 CONECT 41 40 42 43 CONECT 42 41 CONECT 43 41 CONECT 44 31 CONECT 45 24 19 MASTER 0 0 0 0 0 0 0 0 45 0 94 0 END 3D PDB for HMDB0259847 (Vitamin D3 palmitic acid)COMPND HMDB0259847 HETATM 1 C1 UNL 1 -3.076 -5.391 -0.881 1.00 0.00 C HETATM 2 C2 UNL 1 -2.148 -4.707 -0.296 1.00 0.00 C HETATM 3 C3 UNL 1 -0.688 -5.113 -0.451 1.00 0.00 C HETATM 4 C4 UNL 1 -0.197 -5.366 0.971 1.00 0.00 C HETATM 5 C5 UNL 1 -0.410 -4.166 1.852 1.00 0.00 C HETATM 6 O1 UNL 1 0.689 -3.265 1.677 1.00 0.00 O HETATM 7 C6 UNL 1 1.638 -3.074 2.651 1.00 0.00 C HETATM 8 O2 UNL 1 1.494 -3.690 3.735 1.00 0.00 O HETATM 9 C7 UNL 1 2.844 -2.165 2.460 1.00 0.00 C HETATM 10 C8 UNL 1 3.959 -3.183 2.227 1.00 0.00 C HETATM 11 C9 UNL 1 5.304 -2.651 1.965 1.00 0.00 C HETATM 12 C10 UNL 1 5.431 -1.785 0.737 1.00 0.00 C HETATM 13 C11 UNL 1 6.869 -1.404 0.554 1.00 0.00 C HETATM 14 C12 UNL 1 7.475 -0.628 1.670 1.00 0.00 C HETATM 15 C13 UNL 1 8.953 -0.342 1.396 1.00 0.00 C HETATM 16 C14 UNL 1 9.136 0.449 0.139 1.00 0.00 C HETATM 17 C15 UNL 1 10.623 0.683 -0.074 1.00 0.00 C HETATM 18 C16 UNL 1 11.275 1.442 1.034 1.00 0.00 C HETATM 19 C17 UNL 1 12.723 1.632 0.809 1.00 0.00 C HETATM 20 C18 UNL 1 13.212 2.306 -0.388 1.00 0.00 C HETATM 21 C19 UNL 1 12.882 3.695 -0.727 1.00 0.00 C HETATM 22 C20 UNL 1 11.468 4.007 -1.022 1.00 0.00 C HETATM 23 C21 UNL 1 11.318 5.492 -1.395 1.00 0.00 C HETATM 24 C22 UNL 1 -1.681 -3.450 1.828 1.00 0.00 C HETATM 25 C23 UNL 1 -2.439 -3.584 0.558 1.00 0.00 C HETATM 26 C24 UNL 1 -3.329 -2.690 0.171 1.00 0.00 C HETATM 27 C25 UNL 1 -4.094 -2.618 -1.019 1.00 0.00 C HETATM 28 C26 UNL 1 -5.027 -1.697 -1.283 1.00 0.00 C HETATM 29 C27 UNL 1 -5.684 -1.833 -2.607 1.00 0.00 C HETATM 30 C28 UNL 1 -7.166 -2.000 -2.389 1.00 0.00 C HETATM 31 C29 UNL 1 -7.669 -1.322 -1.108 1.00 0.00 C HETATM 32 C30 UNL 1 -6.872 -0.122 -0.773 1.00 0.00 C HETATM 33 C31 UNL 1 -6.625 0.791 -1.924 1.00 0.00 C HETATM 34 C32 UNL 1 -5.482 -0.700 -0.367 1.00 0.00 C HETATM 35 C33 UNL 1 -4.789 0.538 -0.029 1.00 0.00 C HETATM 36 C34 UNL 1 -5.912 1.452 0.587 1.00 0.00 C HETATM 37 C35 UNL 1 -7.131 0.582 0.513 1.00 0.00 C HETATM 38 C36 UNL 1 -8.424 0.949 0.985 1.00 0.00 C HETATM 39 C37 UNL 1 -8.172 1.642 2.386 1.00 0.00 C HETATM 40 C38 UNL 1 -9.598 1.464 0.369 1.00 0.00 C HETATM 41 C39 UNL 1 -10.165 2.578 -0.306 1.00 0.00 C HETATM 42 C40 UNL 1 -9.708 3.345 -1.465 1.00 0.00 C HETATM 43 C41 UNL 1 -8.846 4.541 -1.268 1.00 0.00 C HETATM 44 C42 UNL 1 -7.579 4.355 -0.548 1.00 0.00 C HETATM 45 C43 UNL 1 -8.628 5.242 -2.616 1.00 0.00 C HETATM 46 H1 UNL 1 -2.863 -6.269 -1.500 1.00 0.00 H HETATM 47 H2 UNL 1 -4.128 -5.174 -0.764 1.00 0.00 H HETATM 48 H3 UNL 1 -0.115 -4.381 -1.008 1.00 0.00 H HETATM 49 H4 UNL 1 -0.700 -6.072 -0.985 1.00 0.00 H HETATM 50 H5 UNL 1 -0.732 -6.230 1.391 1.00 0.00 H HETATM 51 H6 UNL 1 0.893 -5.543 0.893 1.00 0.00 H HETATM 52 H7 UNL 1 -0.275 -4.592 2.912 1.00 0.00 H HETATM 53 H8 UNL 1 2.688 -1.595 1.537 1.00 0.00 H HETATM 54 H9 UNL 1 3.016 -1.562 3.346 1.00 0.00 H HETATM 55 H10 UNL 1 3.633 -3.863 1.381 1.00 0.00 H HETATM 56 H11 UNL 1 3.988 -3.803 3.154 1.00 0.00 H HETATM 57 H12 UNL 1 5.645 -2.124 2.882 1.00 0.00 H HETATM 58 H13 UNL 1 5.995 -3.510 1.833 1.00 0.00 H HETATM 59 H14 UNL 1 4.798 -0.873 0.805 1.00 0.00 H HETATM 60 H15 UNL 1 5.108 -2.332 -0.178 1.00 0.00 H HETATM 61 H16 UNL 1 6.987 -0.839 -0.412 1.00 0.00 H HETATM 62 H17 UNL 1 7.464 -2.354 0.434 1.00 0.00 H HETATM 63 H18 UNL 1 6.970 0.333 1.844 1.00 0.00 H HETATM 64 H19 UNL 1 7.420 -1.201 2.634 1.00 0.00 H HETATM 65 H20 UNL 1 9.504 -1.318 1.258 1.00 0.00 H HETATM 66 H21 UNL 1 9.316 0.202 2.266 1.00 0.00 H HETATM 67 H22 UNL 1 8.568 1.387 0.131 1.00 0.00 H HETATM 68 H23 UNL 1 8.826 -0.194 -0.726 1.00 0.00 H HETATM 69 H24 UNL 1 10.735 1.196 -1.034 1.00 0.00 H HETATM 70 H25 UNL 1 11.108 -0.319 -0.136 1.00 0.00 H HETATM 71 H26 UNL 1 10.778 2.350 1.354 1.00 0.00 H HETATM 72 H27 UNL 1 11.216 0.789 1.994 1.00 0.00 H HETATM 73 H28 UNL 1 13.125 2.192 1.720 1.00 0.00 H HETATM 74 H29 UNL 1 13.229 0.621 0.903 1.00 0.00 H HETATM 75 H30 UNL 1 14.372 2.286 -0.318 1.00 0.00 H HETATM 76 H31 UNL 1 13.070 1.618 -1.305 1.00 0.00 H HETATM 77 H32 UNL 1 13.248 4.383 0.103 1.00 0.00 H HETATM 78 H33 UNL 1 13.479 4.066 -1.626 1.00 0.00 H HETATM 79 H34 UNL 1 11.105 3.386 -1.873 1.00 0.00 H HETATM 80 H35 UNL 1 10.797 3.868 -0.176 1.00 0.00 H HETATM 81 H36 UNL 1 11.593 6.103 -0.519 1.00 0.00 H HETATM 82 H37 UNL 1 10.280 5.682 -1.678 1.00 0.00 H HETATM 83 H38 UNL 1 11.979 5.733 -2.235 1.00 0.00 H HETATM 84 H39 UNL 1 -2.329 -3.829 2.675 1.00 0.00 H HETATM 85 H40 UNL 1 -1.525 -2.338 1.980 1.00 0.00 H HETATM 86 H41 UNL 1 -3.494 -1.885 0.907 1.00 0.00 H HETATM 87 H42 UNL 1 -3.911 -3.329 -1.848 1.00 0.00 H HETATM 88 H43 UNL 1 -5.372 -2.836 -3.076 1.00 0.00 H HETATM 89 H44 UNL 1 -5.474 -1.033 -3.310 1.00 0.00 H HETATM 90 H45 UNL 1 -7.495 -3.061 -2.422 1.00 0.00 H HETATM 91 H46 UNL 1 -7.686 -1.493 -3.232 1.00 0.00 H HETATM 92 H47 UNL 1 -7.632 -2.123 -0.336 1.00 0.00 H HETATM 93 H48 UNL 1 -8.714 -1.036 -1.334 1.00 0.00 H HETATM 94 H49 UNL 1 -7.005 1.826 -1.737 1.00 0.00 H HETATM 95 H50 UNL 1 -7.182 0.465 -2.845 1.00 0.00 H HETATM 96 H51 UNL 1 -5.581 0.940 -2.233 1.00 0.00 H HETATM 97 H52 UNL 1 -5.735 -1.196 0.648 1.00 0.00 H HETATM 98 H53 UNL 1 -4.114 0.359 0.868 1.00 0.00 H HETATM 99 H54 UNL 1 -4.236 1.063 -0.804 1.00 0.00 H HETATM 100 H55 UNL 1 -5.864 2.322 -0.036 1.00 0.00 H HETATM 101 H56 UNL 1 -5.650 1.727 1.633 1.00 0.00 H HETATM 102 H57 UNL 1 -6.772 -0.265 1.293 1.00 0.00 H HETATM 103 H58 UNL 1 -8.839 -0.080 1.473 1.00 0.00 H HETATM 104 H59 UNL 1 -7.543 2.512 2.291 1.00 0.00 H HETATM 105 H60 UNL 1 -7.547 0.872 2.923 1.00 0.00 H HETATM 106 H61 UNL 1 -9.113 1.728 2.929 1.00 0.00 H HETATM 107 H62 UNL 1 -10.057 0.537 -0.305 1.00 0.00 H HETATM 108 H63 UNL 1 -10.507 1.244 1.197 1.00 0.00 H HETATM 109 H64 UNL 1 -10.459 3.431 0.466 1.00 0.00 H HETATM 110 H65 UNL 1 -11.304 2.337 -0.590 1.00 0.00 H HETATM 111 H66 UNL 1 -9.163 2.618 -2.171 1.00 0.00 H HETATM 112 H67 UNL 1 -10.574 3.649 -2.153 1.00 0.00 H HETATM 113 H68 UNL 1 -9.462 5.302 -0.667 1.00 0.00 H HETATM 114 H69 UNL 1 -7.678 3.682 0.313 1.00 0.00 H HETATM 115 H70 UNL 1 -6.787 4.085 -1.250 1.00 0.00 H HETATM 116 H71 UNL 1 -7.235 5.341 -0.069 1.00 0.00 H HETATM 117 H72 UNL 1 -7.874 6.014 -2.477 1.00 0.00 H HETATM 118 H73 UNL 1 -8.381 4.464 -3.363 1.00 0.00 H HETATM 119 H74 UNL 1 -9.577 5.700 -2.942 1.00 0.00 H CONECT 1 2 2 46 47 CONECT 2 3 25 CONECT 3 4 48 49 CONECT 4 5 50 51 CONECT 5 6 24 52 CONECT 6 7 CONECT 7 8 8 9 CONECT 9 10 53 54 CONECT 10 11 55 56 CONECT 11 12 57 58 CONECT 12 13 59 60 CONECT 13 14 61 62 CONECT 14 15 63 64 CONECT 15 16 65 66 CONECT 16 17 67 68 CONECT 17 18 69 70 CONECT 18 19 71 72 CONECT 19 20 73 74 CONECT 20 21 75 76 CONECT 21 22 77 78 CONECT 22 23 79 80 CONECT 23 81 82 83 CONECT 24 25 84 85 CONECT 25 26 26 CONECT 26 27 86 CONECT 27 28 28 87 CONECT 28 29 34 CONECT 29 30 88 89 CONECT 30 31 90 91 CONECT 31 32 92 93 CONECT 32 33 34 37 CONECT 33 94 95 96 CONECT 34 35 97 CONECT 35 36 98 99 CONECT 36 37 100 101 CONECT 37 38 102 CONECT 38 39 40 103 CONECT 39 104 105 106 CONECT 40 41 107 108 CONECT 41 42 109 110 CONECT 42 43 111 112 CONECT 43 44 45 113 CONECT 44 114 115 116 CONECT 45 117 118 119 END SMILES for HMDB0259847 (Vitamin D3 palmitic acid)CCCCCCCCCCCCCCCC(=O)OC1CCC(=C)C(C1)=CC=C1CCCC2(C)C(CCC12)C(C)CCCC(C)C INCHI for HMDB0259847 (Vitamin D3 palmitic acid)InChI=1S/C43H74O2/c1-7-8-9-10-11-12-13-14-15-16-17-18-19-25-42(44)45-39-29-26-35(4)38(33-39)28-27-37-24-21-32-43(6)40(30-31-41(37)43)36(5)23-20-22-34(2)3/h27-28,34,36,39-41H,4,7-26,29-33H2,1-3,5-6H3 3D Structure for HMDB0259847 (Vitamin D3 palmitic acid) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Synonyms |
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Chemical Formula | C43H74O2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Average Molecular Weight | 623.063 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Monoisotopic Molecular Weight | 622.568881623 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IUPAC Name | 3-{2-[7a-methyl-1-(6-methylheptan-2-yl)-octahydro-1H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexyl hexadecanoate | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Traditional Name | 3-{2-[7a-methyl-1-(6-methylheptan-2-yl)-hexahydro-1H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexyl hexadecanoate | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CAS Registry Number | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SMILES | CCCCCCCCCCCCCCCC(=O)OC1CCC(=C)C(C1)=CC=C1CCCC2(C)C(CCC12)C(C)CCCC(C)C | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Identifier | InChI=1S/C43H74O2/c1-7-8-9-10-11-12-13-14-15-16-17-18-19-25-42(44)45-39-29-26-35(4)38(33-39)28-27-37-24-21-32-43(6)40(30-31-41(37)43)36(5)23-20-22-34(2)3/h27-28,34,36,39-41H,4,7-26,29-33H2,1-3,5-6H3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Key | FURKZYNGFYQYCT-UHFFFAOYSA-N | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chemical Taxonomy | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | Belongs to the class of organic compounds known as vitamin d and derivatives. Vitamin D and derivatives are compounds containing a secosteroid backbone, usually secoergostane or secocholestane. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Kingdom | Organic compounds | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Super Class | Lipids and lipid-like molecules | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Class | Steroids and steroid derivatives | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sub Class | Vitamin D and derivatives | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Direct Parent | Vitamin D and derivatives | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alternative Parents | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Substituents |
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Molecular Framework | Aliphatic homopolycyclic compounds | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
External Descriptors | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Ontology | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Physiological effect | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disposition | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Process | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Role | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Physical Properties | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
State | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Molecular Properties |
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Experimental Chromatographic Properties | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted Molecular Properties |
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Predicted Chromatographic Properties | Predicted Collision Cross Sections
Predicted Kovats Retention IndicesUnderivatized
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Spectra | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Biological Properties | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Cellular Locations | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Biospecimen Locations |
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Tissue Locations | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Pathways |
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Normal Concentrations | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Abnormal Concentrations | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Associated Disorders and Diseases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Disease References | None | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Associated OMIM IDs | None | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
External Links | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DrugBank ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Phenol Explorer Compound ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
FooDB ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KNApSAcK ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chemspider ID | 21237115 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KEGG Compound ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BioCyc ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BiGG ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Wikipedia Link | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
METLIN ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PubChem Compound | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PDB ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ChEBI ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Food Biomarker Ontology | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
VMH ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MarkerDB ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Good Scents ID | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
References | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Synthesis Reference | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Material Safety Data Sheet (MSDS) | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
General References |
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