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Record Information

Version

5.0

Status

Predicted

Creation Date

2021-09-12 14:57:23 UTC

Update Date

2022-11-30 19:57:15 UTC

HMDB ID

HMDB0268598

Secondary Accession Numbers

None

Metabolite Identification

Common Name

PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)

Description

PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) is an oxidized phosphatidylglycerol (PG). Oxidized phosphatidylglycerols are glycerophospholipids in which a phosphoglycerol moiety occupies a glycerol substitution site and at least one of the fatty acyl chains has undergone oxidation. As all oxidized lipids, oxidized phosphatidylglycerols belong to a group of biomolecules that have a role as signaling molecules. The biosynthesis of oxidized lipids is mediated by several enzymatic families, including cyclooxygenases (COX), lipoxygenases (LOX) and cytochrome P450s (CYP). Non-enzymatically oxidized lipids are produced by uncontrolled oxidation through free radicals and are considered harmful to human health (PMID: 33329396 ). As is the case with diacylglycerols, phosphatidylglycerols can have many different combinations of fatty acids of varying lengths, saturation and degrees of oxidation attached at the C-1 and C-2 positions. PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0), in particular, consists of one chain of one 5,6-dihydroxyeicosatrienoyl at the C-1 position and one chain of hexadecanoyl at the C-2 position. Phospholipids are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling. Similarly to what occurs with phospholipids, the fatty acid distribution at the C-1 and C-2 positions of glycerol within oxidized phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. Oxidized PGs can be synthesized via three different routes. In one route, the oxidized PG is synthetized de novo following the same mechanisms as for PGs but incorporating oxidized acyl chains (PMID: 33329396 ). An alternative is the transacylation of one of the non-oxidized acyl chains with an oxidized acylCoA (PMID: 33329396 ). The third pathway results from the oxidation of the acyl chain while still attached to the PG backbone, mainly through the action of LOX (PMID: 33329396 ).

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)
  Mrv1652309122116572D          

 57 56  0  0  1  0            999 V2000
   -3.8020    0.3607    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9591    0.3596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2447    0.7720    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6571    1.4866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1679    0.0575    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4699    1.1846    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1844    0.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8989    1.1846    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6134    0.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2885    1.2234    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3114    1.8990    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4864    1.8990    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0969    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3824    0.3590    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6679    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9699   -0.3554    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7950   -0.3554    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5121    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5121    1.5410    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2262    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9403    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6544    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3686    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3686    1.5410    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0827    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0827   -0.4150    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7968    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5109    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3359    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0500    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7641    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.5891    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.3032    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0173    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.8423    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.5565    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.2706    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.9847    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.6988    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -18.4129    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2236   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9377   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6518   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3660   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0801   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7942   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5083   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2225   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9366   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6507   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3648   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0789   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.7930   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.5071   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2212   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1 18  1  0  0  0  0
  2 15  1  0  0  0  0
  3  2  1  0  0  0  0
  4  3  2  0  0  0  0
  5  3  1  0  0  0  0
  6  3  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  1  0  0  0  0
  8 12  1  0  0  0  0
  8 11  1  6  0  0  0
  9  8  1  0  0  0  0
  9 10  1  0  0  0  0
 13  1  1  0  0  0  0
 14 13  1  0  0  0  0
 14 16  1  1  0  0  0
 14 17  1  0  0  0  0
 15 14  1  0  0  0  0
 17 41  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  2  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 41 42  2  0  0  0  0
 41 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  END

HMDB0268598
     RDKit          3D
PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)
132131  0  0  0  0  0  0  0  0999 V2000
  -15.6743    3.3980   -0.5792 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1552    2.2834    0.3239 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.8487    1.0867   -0.5330 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8155    1.4291   -1.5527 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4947    1.8918   -0.9563 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.9057    0.8486   -0.0952 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7274    0.2802   -0.2750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8013    0.5870   -1.3590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4765    1.1003   -1.0877 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9220    1.3937    0.0460 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4861    1.2914    1.3642 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9288    0.3873    2.3588 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9405   -0.4244    2.2407 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0724   -0.6990    1.0843 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6115   -0.3459    1.4211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2401   -1.1449    2.4957 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6907   -0.4687    0.2679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1849    0.3844   -0.7461 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2897   -0.0135    0.5524 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5964   -0.7510    1.6303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3981   -2.2130    1.4242 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5492   -2.5409    0.2301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3376   -3.7480   -0.0292 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0253   -1.5797   -0.5411 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -1.5661   -1.6401 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1870   -1.9580   -1.4290 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4548   -3.3900   -1.1554 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8571   -4.2872   -2.0319 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2025   -5.8757   -1.6818 P   0  0  0  0  0  5  0  0  0  0  0  0
    2.7527   -6.5133   -2.9503 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3316   -6.0180   -0.4307 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7963   -6.6869   -1.2220 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8977   -7.1638    0.0907 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3571   -7.8962    0.4786 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2837   -8.3765    1.7881 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5273   -6.9618    0.3170 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7233   -7.6274    0.6113 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8329   -1.1776   -0.4222 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8709   -0.3021   -0.6361 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3010   -0.1660   -1.8058 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4788    0.4770    0.4971 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9569    1.8623    0.5620 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4614    2.7361    1.6042 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7553    3.3529    1.7257 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0601    2.7231    1.6450 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5295    2.3095    0.2846 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8979    1.6156    0.4022 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3756    1.2322   -0.9564 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5721    2.3604   -1.8866 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4538    3.4802   -1.5741 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8989    3.3157   -1.3078 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2624    2.5414   -0.0943 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.7071    2.3156    0.1694 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5774    3.4809    0.3640 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7733    4.4090   -0.7732 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.1829    4.1746    0.0365 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.3964    2.8869   -1.2766 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.8740    3.8110   -1.2254 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.9617    2.0625    1.0692 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2795    2.6970    0.8614 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.5945    0.1882    0.0664 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.8112    0.8213   -1.0413 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.6464    0.5059   -2.1722 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.1590    2.2028   -2.2493 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.6670    2.8337   -0.3460 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8891    2.2252   -1.7997 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4867    0.4909    0.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4643   -0.5217    0.4778 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2861    1.3310   -2.0658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.7472   -0.3307   -2.0552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8207    1.2704   -2.0183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8625    1.8153   -0.0010 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5876    1.3486    1.4229 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2582    2.3574    1.8862 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4434    0.4164    3.3626 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6826   -1.0225    3.1493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3892   -0.3906    0.1103 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1093   -1.8615    0.9998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6787    0.6848    1.8339 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8382   -1.9272    2.6259 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6851   -1.4838   -0.1705 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2067    1.2775   -0.3260 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6975   -0.0440   -0.3767 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3217    1.0587    0.8463 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9960   -0.5221    2.6567 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5524   -0.3120    1.6854 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3647   -2.7596    1.3028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8902   -2.6903    2.2830 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3741   -2.2776   -2.4298 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7359   -0.5802   -2.1964 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7333   -1.6944   -2.4202 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5970   -3.5848   -1.2101 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2293   -3.6423   -0.1244 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2160   -5.7476   -0.7853 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7735   -7.8646    0.1058 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1390   -6.3285    0.7946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4517   -8.7618   -0.2176 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0996   -8.0872    2.3043 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3478   -6.0880    0.9855 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5690   -6.6044   -0.7256 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5170   -8.5813    0.7674 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1102   -0.0203    1.4777 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5206    0.3696    0.5253 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9675    2.3588   -0.4645 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8275    1.7495    0.7243 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2133    2.2248    2.6174 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6979    3.6262    1.6794 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7209    3.9284    2.7469 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8194    4.2811    1.0341 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8369    3.4673    2.0327 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2094    1.8623    2.3572 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8022    3.2795   -0.2656 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8810    1.7779   -0.3649 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5355    2.3810    0.9053 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7617    0.7578    1.0652 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4471    0.6745   -1.4049 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.1196    0.4454   -0.9399 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5475    2.8033   -2.1054 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.8312    1.8941   -2.8926 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.3881    4.1918   -2.4785 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9668    4.1232   -0.7711 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.3486    4.3633   -1.1633 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.4305    2.9406   -2.2146 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.8023    3.0375    0.8365 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.7593    1.5332   -0.0643 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8225    1.6338    1.0634 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1033    1.6829   -0.6769 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.2804    4.0413    1.3000 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.6031    3.0749    0.6563 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.8868    4.6624   -0.8603 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.2923    5.3962   -0.5958 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.5208    4.0284   -1.7693 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 15 17  1  0
 17 18  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
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 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 29 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
 34 36  1  0
 36 37  1  0
 26 38  1  0
 38 39  1  0
 39 40  2  0
 39 41  1  0
 41 42  1  0
 42 43  1  0
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  1 56  1  0
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  1 58  1  0
  2 59  1  0
  2 60  1  0
  3 61  1  0
  3 62  1  0
  4 63  1  0
  4 64  1  0
  5 65  1  0
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  6 67  1  0
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 25 89  1  0
 25 90  1  0
 26 91  1  6
 27 92  1  0
 27 93  1  0
 31 94  1  0
 33 95  1  0
 33 96  1  0
 34 97  1  6
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 36100  1  0
 37101  1  0
 41102  1  0
 41103  1  0
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 45110  1  0
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 49119  1  0
 50120  1  0
 50121  1  0
 51122  1  0
 51123  1  0
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 52125  1  0
 53126  1  0
 53127  1  0
 54128  1  0
 54129  1  0
 55130  1  0
 55131  1  0
 55132  1  0
M  END

PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)
  Mrv1652309122116572D          

 57 56  0  0  1  0            999 V2000
   -3.8020    0.3607    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9591    0.3596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2447    0.7720    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6571    1.4866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1679    0.0575    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4699    1.1846    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1844    0.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8989    1.1846    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.6134    0.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2885    1.2234    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3114    1.8990    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4864    1.8990    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0969    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3824    0.3590    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6679    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9699   -0.3554    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7950   -0.3554    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5121    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5121    1.5410    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2262    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9403    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6544    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3686    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3686    1.5410    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0827    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0827   -0.4150    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7968    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5109    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3359    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0500    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7641    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.5891    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.3032    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0173    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.8423    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.5565    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.2706    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.9847    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.6988    0.3564    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -18.4129    0.7695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2236   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9377   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6518   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3660   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0801   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7942   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5083   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2225   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9366   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6507   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3648   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0789   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.7930   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.5071   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2212   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1 18  1  0  0  0  0
  2 15  1  0  0  0  0
  3  2  1  0  0  0  0
  4  3  2  0  0  0  0
  5  3  1  0  0  0  0
  6  3  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  1  0  0  0  0
  8 12  1  0  0  0  0
  8 11  1  6  0  0  0
  9  8  1  0  0  0  0
  9 10  1  0  0  0  0
 13  1  1  0  0  0  0
 14 13  1  0  0  0  0
 14 16  1  1  0  0  0
 14 17  1  0  0  0  0
 15 14  1  0  0  0  0
 17 41  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  2  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 41 42  2  0  0  0  0
 41 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0268598

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCC(O)C(O)C\C=C/C\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C42H77O12P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-31-42(48)54-38(36-53-55(49,50)52-34-37(44)33-43)35-51-41(47)32-28-30-40(46)39(45)29-26-24-22-20-18-16-14-12-10-8-6-4-2/h12,14,18,20,24,26,37-40,43-46H,3-11,13,15-17,19,21-23,25,27-36H2,1-2H3,(H,49,50)/b14-12-,20-18-,26-24-/t37-,38+,39?,40?/m0/s1

> <INCHI_KEY>
GUYPUWOURQCUKK-KZFWXTORSA-N

> <FORMULA>
C42H77O12P

> <MOLECULAR_WEIGHT>
805.04

> <EXACT_MASS>
804.515264917

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
132

> <JCHEM_AVERAGE_POLARIZABILITY>
94.4213134159075

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
[(2R)-3-{[(8Z,11Z,14Z)-5,6-dihydroxyicosa-8,11,14-trienoyl]oxy}-2-(hexadecanoyloxy)propoxy][(2S)-2,3-dihydroxypropoxy]phosphinic acid

> <ALOGPS_LOGP>
6.59

> <JCHEM_LOGP>
9.167939075333333

> <ALOGPS_LOGS>
-6.50

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
13.441183464306189

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8907737771903692

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9689647678483633

> <JCHEM_POLAR_SURFACE_AREA>
189.28

> <JCHEM_REFRACTIVITY>
220.09370000000007

> <JCHEM_ROTATABLE_BOND_COUNT>
41

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.56e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-3-{[(8Z,11Z,14Z)-5,6-dihydroxyicosa-8,11,14-trienoyl]oxy}-2-(hexadecanoyloxy)propoxy((2S)-2,3-dihydroxypropoxy)phosphinic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0268598
     RDKit          3D
PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)
132131  0  0  0  0  0  0  0  0999 V2000
  -15.6743    3.3980   -0.5792 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1552    2.2834    0.3239 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.8487    1.0867   -0.5330 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8155    1.4291   -1.5527 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4947    1.8918   -0.9563 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.9057    0.8486   -0.0952 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7274    0.2802   -0.2750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8013    0.5870   -1.3590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4765    1.1003   -1.0877 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9220    1.3937    0.0460 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4861    1.2914    1.3642 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9288    0.3873    2.3588 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9405   -0.4244    2.2407 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0724   -0.6990    1.0843 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6115   -0.3459    1.4211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2401   -1.1449    2.4957 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6907   -0.4687    0.2679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1849    0.3844   -0.7461 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2897   -0.0135    0.5524 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5964   -0.7510    1.6303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3981   -2.2130    1.4242 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5492   -2.5409    0.2301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3376   -3.7480   -0.0292 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

HEADER    PROTEIN                                 12-SEP-21   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)                
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-21         0                                  
HETATM    1  O   UNK     0      -7.097   0.673   0.000  0.00  0.00           O+0
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HETATM    5  O   UNK     0       0.313   0.107   0.000  0.00  0.00           O+0
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HETATM   55  C   UNK     0     -23.880  -0.662   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0     -25.213  -1.433   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0     -26.546  -0.662   0.000  0.00  0.00           C+0
CONECT    1   18   13                                                       
CONECT    2   15    3                                                       
CONECT    3    2    4    5    6                                             
CONECT    4    3                                                            
CONECT    5    3                                                            
CONECT    6    3    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7   12   11    9                                             
CONECT    9    8   10                                                       
CONECT   10    9                                                            
CONECT   11    8                                                            
CONECT   12    8                                                            
CONECT   13    1   14                                                       
CONECT   14   13   16   17   15                                             
CONECT   15    2   14                                                       
CONECT   16   14                                                            
CONECT   17   14   41                                                       
CONECT   18    1   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39                                                            
CONECT   41   17   42   43                                                  
CONECT   42   41                                                            
CONECT   43   41   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  112    0
END

COMPND    HMDB0268598
HETATM    1  C1  UNL     1     -15.674   3.398  -0.579  1.00  0.00           C  
HETATM    2  C2  UNL     1     -15.155   2.283   0.324  1.00  0.00           C  
HETATM    3  C3  UNL     1     -14.849   1.087  -0.533  1.00  0.00           C  
HETATM    4  C4  UNL     1     -13.816   1.429  -1.553  1.00  0.00           C  
HETATM    5  C5  UNL     1     -12.495   1.892  -0.956  1.00  0.00           C  
HETATM    6  C6  UNL     1     -11.906   0.849  -0.095  1.00  0.00           C  
HETATM    7  C7  UNL     1     -10.727   0.280  -0.275  1.00  0.00           C  
HETATM    8  C8  UNL     1      -9.801   0.587  -1.359  1.00  0.00           C  
HETATM    9  C9  UNL     1      -8.476   1.100  -1.088  1.00  0.00           C  
HETATM   10  C10 UNL     1      -7.922   1.394   0.046  1.00  0.00           C  
HETATM   11  C11 UNL     1      -8.486   1.291   1.364  1.00  0.00           C  
HETATM   12  C12 UNL     1      -7.929   0.387   2.359  1.00  0.00           C  
HETATM   13  C13 UNL     1      -6.940  -0.424   2.241  1.00  0.00           C  
HETATM   14  C14 UNL     1      -6.072  -0.699   1.084  1.00  0.00           C  
HETATM   15  C15 UNL     1      -4.612  -0.346   1.421  1.00  0.00           C  
HETATM   16  O1  UNL     1      -4.240  -1.145   2.496  1.00  0.00           O  
HETATM   17  C16 UNL     1      -3.691  -0.469   0.268  1.00  0.00           C  
HETATM   18  O2  UNL     1      -4.185   0.384  -0.746  1.00  0.00           O  
HETATM   19  C17 UNL     1      -2.290  -0.014   0.552  1.00  0.00           C  
HETATM   20  C18 UNL     1      -1.596  -0.751   1.630  1.00  0.00           C  
HETATM   21  C19 UNL     1      -1.398  -2.213   1.424  1.00  0.00           C  
HETATM   22  C20 UNL     1      -0.549  -2.541   0.230  1.00  0.00           C  
HETATM   23  O3  UNL     1      -0.338  -3.748  -0.029  1.00  0.00           O  
HETATM   24  O4  UNL     1      -0.025  -1.580  -0.541  1.00  0.00           O  
HETATM   25  C21 UNL     1       0.782  -1.566  -1.640  1.00  0.00           C  
HETATM   26  C22 UNL     1       2.187  -1.958  -1.429  1.00  0.00           C  
HETATM   27  C23 UNL     1       2.455  -3.390  -1.155  1.00  0.00           C  
HETATM   28  O5  UNL     1       1.857  -4.287  -2.032  1.00  0.00           O  
HETATM   29  P1  UNL     1       2.202  -5.876  -1.682  1.00  0.00           P  
HETATM   30  O6  UNL     1       2.753  -6.513  -2.950  1.00  0.00           O  
HETATM   31  O7  UNL     1       3.332  -6.018  -0.431  1.00  0.00           O  
HETATM   32  O8  UNL     1       0.796  -6.687  -1.222  1.00  0.00           O  
HETATM   33  C24 UNL     1       0.898  -7.164   0.091  1.00  0.00           C  
HETATM   34  C25 UNL     1      -0.357  -7.896   0.479  1.00  0.00           C  
HETATM   35  O9  UNL     1      -0.284  -8.377   1.788  1.00  0.00           O  
HETATM   36  C26 UNL     1      -1.527  -6.962   0.317  1.00  0.00           C  
HETATM   37  O10 UNL     1      -2.723  -7.627   0.611  1.00  0.00           O  
HETATM   38  O11 UNL     1       2.833  -1.178  -0.422  1.00  0.00           O  
HETATM   39  C27 UNL     1       3.871  -0.302  -0.636  1.00  0.00           C  
HETATM   40  O12 UNL     1       4.301  -0.166  -1.806  1.00  0.00           O  
HETATM   41  C28 UNL     1       4.479   0.477   0.497  1.00  0.00           C  
HETATM   42  C29 UNL     1       3.957   1.862   0.562  1.00  0.00           C  
HETATM   43  C30 UNL     1       4.461   2.736   1.604  1.00  0.00           C  
HETATM   44  C31 UNL     1       5.755   3.353   1.726  1.00  0.00           C  
HETATM   45  C32 UNL     1       7.060   2.723   1.645  1.00  0.00           C  
HETATM   46  C33 UNL     1       7.530   2.310   0.285  1.00  0.00           C  
HETATM   47  C34 UNL     1       8.898   1.616   0.402  1.00  0.00           C  
HETATM   48  C35 UNL     1       9.376   1.232  -0.956  1.00  0.00           C  
HETATM   49  C36 UNL     1       9.572   2.360  -1.887  1.00  0.00           C  
HETATM   50  C37 UNL     1      10.454   3.480  -1.574  1.00  0.00           C  
HETATM   51  C38 UNL     1      11.899   3.316  -1.308  1.00  0.00           C  
HETATM   52  C39 UNL     1      12.262   2.541  -0.094  1.00  0.00           C  
HETATM   53  C40 UNL     1      13.707   2.316   0.169  1.00  0.00           C  
HETATM   54  C41 UNL     1      14.577   3.481   0.364  1.00  0.00           C  
HETATM   55  C42 UNL     1      14.773   4.409  -0.773  1.00  0.00           C  
HETATM   56  H1  UNL     1     -16.183   4.175   0.037  1.00  0.00           H  
HETATM   57  H2  UNL     1     -16.396   2.887  -1.277  1.00  0.00           H  
HETATM   58  H3  UNL     1     -14.874   3.811  -1.225  1.00  0.00           H  
HETATM   59  H4  UNL     1     -15.962   2.063   1.069  1.00  0.00           H  
HETATM   60  H5  UNL     1     -14.279   2.697   0.861  1.00  0.00           H  
HETATM   61  H6  UNL     1     -14.594   0.188   0.066  1.00  0.00           H  
HETATM   62  H7  UNL     1     -15.811   0.821  -1.041  1.00  0.00           H  
HETATM   63  H8  UNL     1     -13.646   0.506  -2.172  1.00  0.00           H  
HETATM   64  H9  UNL     1     -14.159   2.203  -2.249  1.00  0.00           H  
HETATM   65  H10 UNL     1     -12.667   2.834  -0.346  1.00  0.00           H  
HETATM   66  H11 UNL     1     -11.889   2.225  -1.800  1.00  0.00           H  
HETATM   67  H12 UNL     1     -12.487   0.491   0.793  1.00  0.00           H  
HETATM   68  H13 UNL     1     -10.464  -0.522   0.478  1.00  0.00           H  
HETATM   69  H14 UNL     1     -10.286   1.331  -2.066  1.00  0.00           H  
HETATM   70  H15 UNL     1      -9.747  -0.331  -2.055  1.00  0.00           H  
HETATM   71  H16 UNL     1      -7.821   1.270  -2.018  1.00  0.00           H  
HETATM   72  H17 UNL     1      -6.863   1.815  -0.001  1.00  0.00           H  
HETATM   73  H18 UNL     1      -9.588   1.349   1.423  1.00  0.00           H  
HETATM   74  H19 UNL     1      -8.258   2.357   1.886  1.00  0.00           H  
HETATM   75  H20 UNL     1      -8.443   0.416   3.363  1.00  0.00           H  
HETATM   76  H21 UNL     1      -6.683  -1.022   3.149  1.00  0.00           H  
HETATM   77  H22 UNL     1      -6.389  -0.391   0.110  1.00  0.00           H  
HETATM   78  H23 UNL     1      -6.109  -1.862   1.000  1.00  0.00           H  
HETATM   79  H24 UNL     1      -4.679   0.685   1.834  1.00  0.00           H  
HETATM   80  H25 UNL     1      -4.838  -1.927   2.626  1.00  0.00           H  
HETATM   81  H26 UNL     1      -3.685  -1.484  -0.171  1.00  0.00           H  
HETATM   82  H27 UNL     1      -4.207   1.277  -0.326  1.00  0.00           H  
HETATM   83  H28 UNL     1      -1.698  -0.044  -0.377  1.00  0.00           H  
HETATM   84  H29 UNL     1      -2.322   1.059   0.846  1.00  0.00           H  
HETATM   85  H30 UNL     1      -1.996  -0.522   2.657  1.00  0.00           H  
HETATM   86  H31 UNL     1      -0.552  -0.312   1.685  1.00  0.00           H  
HETATM   87  H32 UNL     1      -2.365  -2.760   1.303  1.00  0.00           H  
HETATM   88  H33 UNL     1      -0.890  -2.690   2.283  1.00  0.00           H  
HETATM   89  H34 UNL     1       0.374  -2.278  -2.430  1.00  0.00           H  
HETATM   90  H35 UNL     1       0.736  -0.580  -2.196  1.00  0.00           H  
HETATM   91  H36 UNL     1       2.733  -1.694  -2.420  1.00  0.00           H  
HETATM   92  H37 UNL     1       3.597  -3.585  -1.210  1.00  0.00           H  
HETATM   93  H38 UNL     1       2.229  -3.642  -0.124  1.00  0.00           H  
HETATM   94  H39 UNL     1       4.216  -5.748  -0.785  1.00  0.00           H  
HETATM   95  H40 UNL     1       1.774  -7.865   0.106  1.00  0.00           H  
HETATM   96  H41 UNL     1       1.139  -6.329   0.795  1.00  0.00           H  
HETATM   97  H42 UNL     1      -0.452  -8.762  -0.218  1.00  0.00           H  
HETATM   98  H43 UNL     1      -1.100  -8.087   2.304  1.00  0.00           H  
HETATM   99  H44 UNL     1      -1.348  -6.088   0.986  1.00  0.00           H  
HETATM  100  H45 UNL     1      -1.569  -6.604  -0.726  1.00  0.00           H  
HETATM  101  H46 UNL     1      -2.517  -8.581   0.767  1.00  0.00           H  
HETATM  102  H47 UNL     1       4.110  -0.020   1.478  1.00  0.00           H  
HETATM  103  H48 UNL     1       5.521   0.370   0.525  1.00  0.00           H  
HETATM  104  H49 UNL     1       3.968   2.359  -0.465  1.00  0.00           H  
HETATM  105  H50 UNL     1       2.827   1.749   0.724  1.00  0.00           H  
HETATM  106  H51 UNL     1       4.213   2.225   2.617  1.00  0.00           H  
HETATM  107  H52 UNL     1       3.698   3.626   1.679  1.00  0.00           H  
HETATM  108  H53 UNL     1       5.721   3.928   2.747  1.00  0.00           H  
HETATM  109  H54 UNL     1       5.819   4.281   1.034  1.00  0.00           H  
HETATM  110  H55 UNL     1       7.837   3.467   2.033  1.00  0.00           H  
HETATM  111  H56 UNL     1       7.209   1.862   2.357  1.00  0.00           H  
HETATM  112  H57 UNL     1       7.802   3.279  -0.266  1.00  0.00           H  
HETATM  113  H58 UNL     1       6.881   1.778  -0.365  1.00  0.00           H  
HETATM  114  H59 UNL     1       9.536   2.381   0.905  1.00  0.00           H  
HETATM  115  H60 UNL     1       8.762   0.758   1.065  1.00  0.00           H  
HETATM  116  H61 UNL     1       8.447   0.674  -1.405  1.00  0.00           H  
HETATM  117  H62 UNL     1      10.120   0.445  -0.940  1.00  0.00           H  
HETATM  118  H63 UNL     1       8.548   2.803  -2.105  1.00  0.00           H  
HETATM  119  H64 UNL     1       9.831   1.894  -2.893  1.00  0.00           H  
HETATM  120  H65 UNL     1      10.388   4.192  -2.479  1.00  0.00           H  
HETATM  121  H66 UNL     1       9.967   4.123  -0.771  1.00  0.00           H  
HETATM  122  H67 UNL     1      12.349   4.363  -1.163  1.00  0.00           H  
HETATM  123  H68 UNL     1      12.431   2.941  -2.215  1.00  0.00           H  
HETATM  124  H69 UNL     1      11.802   3.038   0.837  1.00  0.00           H  
HETATM  125  H70 UNL     1      11.759   1.533  -0.064  1.00  0.00           H  
HETATM  126  H71 UNL     1      13.823   1.634   1.063  1.00  0.00           H  
HETATM  127  H72 UNL     1      14.103   1.683  -0.677  1.00  0.00           H  
HETATM  128  H73 UNL     1      14.280   4.041   1.300  1.00  0.00           H  
HETATM  129  H74 UNL     1      15.603   3.075   0.656  1.00  0.00           H  
HETATM  130  H75 UNL     1      15.887   4.662  -0.860  1.00  0.00           H  
HETATM  131  H76 UNL     1      14.292   5.396  -0.596  1.00  0.00           H  
HETATM  132  H77 UNL     1      14.521   4.028  -1.769  1.00  0.00           H  
CONECT    1    2   56   57   58
CONECT    2    3   59   60
CONECT    3    4   61   62
CONECT    4    5   63   64
CONECT    5    6   65   66
CONECT    6    7    7   67
CONECT    7    8   68
CONECT    8    9   69   70
CONECT    9   10   10   71
CONECT   10   11   72
CONECT   11   12   73   74
CONECT   12   13   13   75
CONECT   13   14   76
CONECT   14   15   77   78
CONECT   15   16   17   79
CONECT   16   80
CONECT   17   18   19   81
CONECT   18   82
CONECT   19   20   83   84
CONECT   20   21   85   86
CONECT   21   22   87   88
CONECT   22   23   23   24
CONECT   24   25
CONECT   25   26   89   90
CONECT   26   27   38   91
CONECT   27   28   92   93
CONECT   28   29
CONECT   29   30   30   31   32
CONECT   31   94
CONECT   32   33
CONECT   33   34   95   96
CONECT   34   35   36   97
CONECT   35   98
CONECT   36   37   99  100
CONECT   37  101
CONECT   38   39
CONECT   39   40   40   41
CONECT   41   42  102  103
CONECT   42   43  104  105
CONECT   43   44  106  107
CONECT   44   45  108  109
CONECT   45   46  110  111
CONECT   46   47  112  113
CONECT   47   48  114  115
CONECT   48   49  116  117
CONECT   49   50  118  119
CONECT   50   51  120  121
CONECT   51   52  122  123
CONECT   52   53  124  125
CONECT   53   54  126  127
CONECT   54   55  128  129
CONECT   55  130  131  132
END

HMDB0268598
     RDKit          3D
PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)
132131  0  0  0  0  0  0  0  0999 V2000
  -15.6743    3.3980   -0.5792 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1552    2.2834    0.3239 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.8487    1.0867   -0.5330 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8155    1.4291   -1.5527 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4947    1.8918   -0.9563 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.9057    0.8486   -0.0952 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7274    0.2802   -0.2750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8013    0.5870   -1.3590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4765    1.1003   -1.0877 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9220    1.3937    0.0460 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4861    1.2914    1.3642 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9288    0.3873    2.3588 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9405   -0.4244    2.2407 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0724   -0.6990    1.0843 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6115   -0.3459    1.4211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2401   -1.1449    2.4957 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6907   -0.4687    0.2679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1849    0.3844   -0.7461 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2897   -0.0135    0.5524 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5964   -0.7510    1.6303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3981   -2.2130    1.4242 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5492   -2.5409    0.2301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3376   -3.7480   -0.0292 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0253   -1.5797   -0.5411 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -1.5661   -1.6401 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1870   -1.9580   -1.4290 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4548   -3.3900   -1.1554 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8571   -4.2872   -2.0319 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2025   -5.8757   -1.6818 P   0  0  0  0  0  5  0  0  0  0  0  0
    2.7527   -6.5133   -2.9503 O   0  0  0  0  0  0  0  0  0  0  0  0
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    0.7963   -6.6869   -1.2220 O   0  0  0  0  0  0  0  0  0  0  0  0
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    4.4614    2.7361    1.6042 C   0  0  0  0  0  0  0  0  0  0  0  0
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   10.4538    3.4802   -1.5741 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8989    3.3157   -1.3078 C   0  0  0  0  0  0  0  0  0  0  0  0
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    9.5355    2.3810    0.9053 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7617    0.7578    1.0652 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4471    0.6745   -1.4049 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.1196    0.4454   -0.9399 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5475    2.8033   -2.1054 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.8312    1.8941   -2.8926 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.3881    4.1918   -2.4785 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.9668    4.1232   -0.7711 H   0  0  0  0  0  0  0  0  0  0  0  0
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   12.4305    2.9406   -2.2146 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.8023    3.0375    0.8365 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.7593    1.5332   -0.0643 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8225    1.6338    1.0634 H   0  0  0  0  0  0  0  0  0  0  0  0
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   14.2923    5.3962   -0.5958 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.5208    4.0284   -1.7693 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
[(2R)-3-{[(8Z,11Z,14Z)-5,6-dihydroxyicosa-8,11,14-trienoyl]oxy}-2-(hexadecanoyloxy)propoxy][(2S)-2,3-dihydroxypropoxy]phosphinate	Generator

Chemical Formula

C₄₂H₇₇O₁₂P

Average Molecular Weight

805.04

Monoisotopic Molecular Weight

804.515264917

IUPAC Name

[(2R)-3-{[(8Z,11Z,14Z)-5,6-dihydroxyicosa-8,11,14-trienoyl]oxy}-2-(hexadecanoyloxy)propoxy][(2S)-2,3-dihydroxypropoxy]phosphinic acid

Traditional Name

(2R)-3-{[(8Z,11Z,14Z)-5,6-dihydroxyicosa-8,11,14-trienoyl]oxy}-2-(hexadecanoyloxy)propoxy((2S)-2,3-dihydroxypropoxy)phosphinic acid

CAS Registry Number

Not Available

SMILES

[H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCC(O)C(O)C\C=C/C\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCCCCCCCC

InChI Identifier

InChI=1S/C42H77O12P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-31-42(48)54-38(36-53-55(49,50)52-34-37(44)33-43)35-51-41(47)32-28-30-40(46)39(45)29-26-24-22-20-18-16-14-12-10-8-6-4-2/h12,14,18,20,24,26,37-40,43-46H,3-11,13,15-17,19,21-23,25,27-36H2,1-2H3,(H,49,50)/b14-12-,20-18-,26-24-/t37-,38+,39?,40?/m0/s1

InChI Key

GUYPUWOURQCUKK-KZFWXTORSA-N

Chemical Taxonomy

Classification

Not classified

Ontology

Not Available

Not Available

Not Available

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	6.59	ALOGPS
logP	9.17	ChemAxon
logS	-6.5	ALOGPS
pKa (Strongest Acidic)	1.89	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	189.28 Å²	ChemAxon
Rotatable Bond Count	41	ChemAxon
Refractivity	220.09 m³·mol⁻¹	ChemAxon
Polarizability	94.42 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	289.334	32859911
AllCCS	[M+H-H2O]+	289.328	32859911
AllCCS	[M+Na]+	289.289	32859911
AllCCS	[M+NH4]+	289.304	32859911
AllCCS	[M-H]-	286.353	32859911
AllCCS	[M+Na-2H]-	293.039	32859911
AllCCS	[M+HCOO]-	300.4	32859911
DeepCCS	[M+H]+	284.911	30932474
DeepCCS	[M-H]-	283.015	30932474
DeepCCS	[M-2H]-	316.257	30932474
DeepCCS	[M+Na]+	290.69	30932474

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)	[H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCC(O)C(O)C\C=C/C\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCCCCCCCC	5058.8	Standard polar	33892256
PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)	[H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCC(O)C(O)C\C=C/C\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCCCCCCCC	4463.0	Standard non polar	33892256
PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0)	[H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCC(O)C(O)C\C=C/C\C=C/C\C=C/CCCCC)OC(=O)CCCCCCCCCCCCCCC	5689.9	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) GC-MS (TMS_1_3) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) GC-MS (TMS_1_4) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) GC-MS (TMS_1_5) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) 10V, Negative-QTOF	splash10-0udi-0000000090-52842fd60cd3159d5ca6	2021-09-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) 20V, Negative-QTOF	splash10-0zg0-0179320070-2d4d7a6b121148677e45	2021-09-28	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) 40V, Negative-QTOF	splash10-0zg0-0279320070-0d263d876fb1fe116a18	2021-09-28	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Hajeyah AA, Griffiths WJ, Wang Y, Finch AJ, O'Donnell VB: The Biosynthesis of Enzymatically Oxidized Lipids. Front Endocrinol (Lausanne). 2020 Nov 19;11:591819. doi: 10.3389/fendo.2020.591819. eCollection 2020. [PubMed:33329396 ]

Showing metabocard for PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0) (HMDB0268598)

MOL for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

3D MOL for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

3D SDF for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

3D-SDF for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

PDB for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

3D PDB for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

SMILES for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

INCHI for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

Structure for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

3D Structure for HMDB0268598 (PG(20:3(8Z,11Z,14Z)-2OH(5,6)/16:0))

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

GC-MS Spectra

MS/MS Spectra