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Record Information

Version

5.0

Status

Predicted

Creation Date

2021-09-13 01:19:30 UTC

Update Date

2022-11-30 19:59:44 UTC

HMDB ID

HMDB0274358

Secondary Accession Numbers

None

Metabolite Identification

Common Name

PGP(a-13:0/PGE1)

Description

PGP(a-13:0/PGE1) is an oxidized phosphoglycerophosphate (PGP). Oxidized phosphoglycerophosphates are glycerophospholipids in which a phosphoglycerol moiety occupies a glycerol substitution site and at least one of the fatty acyl chains has undergone oxidation. As all oxidized lipids, oxidized phosphoglycerophosphates belong to a group of biomolecules that have a role as signaling molecules. The biosynthesis of oxidized lipids is mediated by several enzymatic families, including cyclooxygenases (COX), lipoxygenases (LOX) and cytochrome P450s (CYP). Non-enzymatically oxidized lipids are produced by uncontrolled oxidation through free radicals and are considered harmful to human health (PMID: 33329396 ). As is the case with diacylglycerols, phosphoglycerophosphates can have many different combinations of fatty acids of varying lengths, saturation and degrees of oxidation attached at the C-1 and C-2 positions. PGP(a-13:0/PGE1), in particular, consists of one chain of one 10-methyldodecanoyl at the C-1 position and one chain of Prostaglandin E1 at the C-2 position. Phospholipids are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling. Similarly to what occurs with phospholipids, the fatty acid distribution at the C-1 and C-2 positions of glycerol within oxidized phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. Oxidized PGPs can be synthesized via three different routes. In one route, the oxidized PGP is synthetized de novo following the same mechanisms as for PGPs but incorporating oxidized acyl chains (PMID: 33329396 ). An alternative is the transacylation of one of the non-oxidized acyl chains with an oxidized acylCoA (PMID: 33329396 ). The third pathway results from the oxidation of the acyl chain while still attached to the PGP backbone, mainely through the action of LOX (PMID: 33329396 ).

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652309132103192D          

 57 57  0  0  1  0            999 V2000
    7.3567  -17.0792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3567  -17.9042    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.0712  -18.3167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0712  -19.1417    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3567  -19.5542    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    6.9442  -18.8398    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.7692  -20.2687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6423  -19.9667    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6423  -18.3167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9278  -17.9042    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9278  -17.0792    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    5.1028  -17.0792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.7528  -17.0792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9278  -16.2542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6423  -15.8417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6423  -15.0167    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.9278  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2133  -15.0167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4989  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4989  -13.7792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7844  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0699  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3554  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6410  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9265  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2120  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5024  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2169  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9314  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9314  -15.8417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6458  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3603  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3567  -14.6042    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0712  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0712  -15.8417    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.7857  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5002  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2146  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9291  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6436  -14.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3580  -15.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.0725  -14.6042    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   13.1587  -13.7837    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5457  -13.2317    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.9657  -13.6122    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3782  -14.3267    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   15.1987  -14.4129    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.8262  -14.9398    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   13.9977  -15.7468    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3846  -16.2988    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5561  -17.1058    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   12.9431  -17.6578    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.3408  -17.3607    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5123  -18.1677    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.2969  -18.4226    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4684  -19.2296    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2531  -19.4845    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  5  7  1  0  0  0  0
  5  8  2  0  0  0  0
  2  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  2  0  0  0  0
 11 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 31 32  1  0  0  0  0
 16 33  1  1  0  0  0
 33 34  1  0  0  0  0
 34 35  2  0  0  0  0
 34 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 42 41  1  1  0  0  0
 42 43  1  0  0  0  0
 43 44  2  0  0  0  0
 43 45  1  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  1  0  0  0
 46 48  1  0  0  0  0
 42 48  1  0  0  0  0
 48 49  1  6  0  0  0
 49 50  2  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  6  0  0  0
 51 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  END

HMDB0274358
     RDKit          3D
PGP(a-13:0/PGE1)
129129  0  0  0  0  0  0  0  0999 V2000
   -0.9703   -4.7522    1.7401 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5003   -4.3859    2.1501 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4353   -5.0896    1.2342 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8525   -4.8118    1.3721 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7070   -5.0455    2.5113 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5921   -4.3977    3.8181 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4756   -4.5491    4.5738 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0117   -2.9442    3.7804 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1423   -2.0178    4.0571 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4001   -0.5680    4.0632 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7836   -0.1434    3.7631 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0001    1.0994    4.4059 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7564    0.1692    2.2892 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4718    0.9016    2.1770 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2767    1.8733    1.4923 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5211    0.1913    3.0664 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6434    1.1868    3.8043 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7419    0.5463    4.7876 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2661   -0.4319    4.1840 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0103   -1.0275    5.3343 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0437   -2.0316    5.0617 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2427   -1.7333    4.2962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2727   -1.3655    2.9146 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4529   -0.9575    2.5053 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3360   -1.3498    1.9071 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7414   -0.9274    0.5728 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4655   -2.0732   -0.3372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0018   -1.8837   -1.6416 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8597   -2.9044   -2.5569 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2045   -3.9403   -2.1715 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3791   -2.9651   -3.9151 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8618   -1.7396   -4.5612 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8591   -0.7276   -4.9466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9211   -0.1886   -3.9167 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0744    0.8730   -4.6143 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0014    1.4710   -3.8030 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0622    0.4351   -3.4086 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1792    1.0823   -2.6070 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2502    0.0718   -2.2735 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3664    0.7021   -1.4769 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7039   -1.1660   -1.6218 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8368   -2.1539   -1.3155 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9118    0.2693    0.1634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1017    1.3311    1.0509 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2372    2.7021    0.6731 P   0  0  0  0  0  5  0  0  0  0  0  0
   -1.5334    3.7237    1.7760 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4055    2.4579    0.5127 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7908    3.4485   -0.7659 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7258    4.2156   -1.2324 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0569    4.9397   -2.5055 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1287    5.7842   -2.2685 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0940    5.7436   -3.0309 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2916    6.3644   -4.2182 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9498    7.2932   -4.8847 P   0  0  0  0  0  5  0  0  0  0  0  0
    2.3038    6.6790   -4.6978 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6955    7.4828   -6.5567 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9340    8.8516   -4.2079 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6088   -4.0972    2.3669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1733   -5.7975    1.9858 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1331   -4.4651    0.6928 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5409   -3.2928    2.0787 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5270   -4.7979    3.1816 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1988   -6.2040    1.1967 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0774   -4.7846    0.1779 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3551   -5.4001    0.4896 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0393   -3.7409    0.9379 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8018   -4.9201    2.1302 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6868   -6.1831    2.7266 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4377   -4.8533    4.4635 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3147   -5.4368    4.9343 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0080   -2.7191    3.5273 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1171   -2.3210    4.3139 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1298   -0.1671    5.0816 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5817   -0.8431    4.0529 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5302    1.6851    3.8182 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6776   -0.7392    1.6643 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6248    0.7734    1.9594 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9604   -0.5509    2.4966 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0693    1.7909    3.0836 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3208    1.8618    4.3446 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2363    0.1368    5.6720 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0844    1.3759    5.1932 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1592   -1.1889    3.5483 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0004    0.1680    3.6025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5000   -0.2165    5.9594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2632   -1.4631    6.0855 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4053   -2.4536    6.0734 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4960   -2.9485    4.6616 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7992   -0.9088    4.8748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9768   -2.6119    4.5028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8154   -0.6524    0.5591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9278   -2.9867    0.0751 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3668   -2.1562   -0.4716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5361   -3.3876   -4.5538 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1423   -3.7881   -3.9304 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7333   -1.2686   -4.0130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3448   -2.0762   -5.5460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3431    0.1421   -5.5115 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309132103192D          

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 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0274358

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCC(C)CC)COP(O)(=O)OC[C@@H](O)COP(O)(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C39H72O16P2/c1-4-6-13-19-31(40)23-24-35-34(36(42)25-37(35)43)20-15-11-12-17-22-39(45)55-33(29-54-57(49,50)53-27-32(41)26-52-56(46,47)48)28-51-38(44)21-16-10-8-7-9-14-18-30(3)5-2/h23-24,30-35,37,40-41,43H,4-22,25-29H2,1-3H3,(H,49,50)(H2,46,47,48)/b24-23+/t30?,31-,32-,33+,34+,35+,37+/m0/s1

> <INCHI_KEY>
AYKXPJAOHZSSJR-UVTVNDECSA-N

> <FORMULA>
C39H72O16P2

> <MOLECULAR_WEIGHT>
858.937

> <EXACT_MASS>
858.429560234

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
129

> <JCHEM_AVERAGE_POLARIZABILITY>
92.010326436153

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
[(2S)-2-hydroxy-3-({hydroxy[(2R)-2-({7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoyl}oxy)-3-[(10-methyldodecanoyl)oxy]propoxy]phosphoryl}oxy)propoxy]phosphonic acid

> <ALOGPS_LOGP>
3.98

> <JCHEM_LOGP>
6.652838940333337

> <ALOGPS_LOGS>
-5.53

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-3

> <JCHEM_PKA>
2.0402997265510456

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.3552389809291259

> <JCHEM_PKA_STRONGEST_BASIC>
-1.6267709532993755

> <JCHEM_POLAR_SURFACE_AREA>
252.87999999999994

> <JCHEM_REFRACTIVITY>
213.56130000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
37

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.52e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-hydroxy-3-{[hydroxy((2R)-2-({7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoyl}oxy)-3-[(10-methyldodecanoyl)oxy]propoxy)phosphoryl]oxy}propoxyphosphonic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0274358
     RDKit          3D
PGP(a-13:0/PGE1)
129129  0  0  0  0  0  0  0  0999 V2000
   -0.9703   -4.7522    1.7401 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5003   -4.3859    2.1501 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4353   -5.0896    1.2342 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8525   -4.8118    1.3721 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7070   -5.0455    2.5113 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5921   -4.3977    3.8181 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4756   -4.5491    4.5738 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0117   -2.9442    3.7804 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1423   -2.0178    4.0571 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4001   -0.5680    4.0632 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7836   -0.1434    3.7631 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0001    1.0994    4.4059 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7564    0.1692    2.2892 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4718    0.9016    2.1770 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2767    1.8733    1.4923 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5211    0.1913    3.0664 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6434    1.1868    3.8043 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7419    0.5463    4.7876 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2661   -0.4319    4.1840 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0103   -1.0275    5.3343 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.2727   -1.3655    2.9146 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.7414   -0.9274    0.5728 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4655   -2.0732   -0.3372 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

HEADER    PROTEIN                                 13-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   13-SEP-21         0                                  
HETATM    1  O   UNK     0      13.733 -31.881   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      13.733 -33.421   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      15.066 -34.191   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      15.066 -35.731   0.000  0.00  0.00           O+0
HETATM    5  P   UNK     0      13.733 -36.501   0.000  0.00  0.00           P+0
HETATM    6  O   UNK     0      12.963 -35.168   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0      14.503 -37.835   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0      12.399 -37.271   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      12.399 -34.191   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      11.065 -33.421   0.000  0.00  0.00           O+0
HETATM   11  P   UNK     0      11.065 -31.881   0.000  0.00  0.00           P+0
HETATM   12  O   UNK     0       9.525 -31.881   0.000  0.00  0.00           O+0
HETATM   13  O   UNK     0      12.605 -31.881   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0      11.065 -30.341   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      12.399 -29.571   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      12.399 -28.031   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      11.065 -27.261   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       9.732 -28.031   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       8.398 -27.261   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       8.398 -25.721   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       7.064 -28.031   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       5.731 -27.261   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       4.397 -28.031   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.063 -27.261   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.729 -28.031   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.396 -27.261   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -0.938 -28.031   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -2.272 -27.261   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -3.605 -28.031   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -3.605 -29.571   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -4.939 -27.261   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -6.273 -28.031   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      13.733 -27.261   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0      15.066 -28.031   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      15.066 -29.571   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      16.400 -27.261   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      17.734 -28.031   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      19.067 -27.261   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      20.401 -28.031   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      21.735 -27.261   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      23.068 -28.031   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      24.402 -27.261   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      24.563 -25.730   0.000  0.00  0.00           C+0
HETATM   44  O   UNK     0      23.419 -24.699   0.000  0.00  0.00           O+0
HETATM   45  C   UNK     0      26.069 -25.409   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      26.839 -26.743   0.000  0.00  0.00           C+0
HETATM   47  O   UNK     0      28.371 -26.904   0.000  0.00  0.00           O+0
HETATM   48  C   UNK     0      25.809 -27.888   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      26.129 -29.394   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      24.985 -30.424   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      25.305 -31.931   0.000  0.00  0.00           C+0
HETATM   52  O   UNK     0      24.160 -32.961   0.000  0.00  0.00           O+0
HETATM   53  C   UNK     0      26.769 -32.407   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      27.090 -33.913   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      28.554 -34.389   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      28.874 -35.895   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      30.339 -36.371   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    9                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7    8                                             
CONECT    6    5                                                            
CONECT    7    5                                                            
CONECT    8    5                                                            
CONECT    9    2   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13   14                                             
CONECT   12   11                                                            
CONECT   13   11                                                            
CONECT   14   11   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   33                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   32                                                       
CONECT   32   31                                                            
CONECT   33   16   34                                                       
CONECT   34   33   35   36                                                  
CONECT   35   34                                                            
CONECT   36   34   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43   48                                                  
CONECT   43   42   44   45                                                  
CONECT   44   43                                                            
CONECT   45   43   46                                                       
CONECT   46   45   47   48                                                  
CONECT   47   46                                                            
CONECT   48   46   42   49                                                  
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52   53                                                  
CONECT   52   51                                                            
CONECT   53   51   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  114    0
END

COMPND    HMDB0274358
HETATM    1  C1  UNL     1      -0.970  -4.752   1.740  1.00  0.00           C  
HETATM    2  C2  UNL     1       0.500  -4.386   2.150  1.00  0.00           C  
HETATM    3  C3  UNL     1       1.435  -5.090   1.234  1.00  0.00           C  
HETATM    4  C4  UNL     1       2.852  -4.812   1.372  1.00  0.00           C  
HETATM    5  C5  UNL     1       3.707  -5.045   2.511  1.00  0.00           C  
HETATM    6  C6  UNL     1       3.592  -4.398   3.818  1.00  0.00           C  
HETATM    7  O1  UNL     1       2.476  -4.549   4.574  1.00  0.00           O  
HETATM    8  C7  UNL     1       4.012  -2.944   3.780  1.00  0.00           C  
HETATM    9  C8  UNL     1       3.142  -2.018   4.057  1.00  0.00           C  
HETATM   10  C9  UNL     1       3.400  -0.568   4.063  1.00  0.00           C  
HETATM   11  C10 UNL     1       4.784  -0.143   3.763  1.00  0.00           C  
HETATM   12  O2  UNL     1       5.000   1.099   4.406  1.00  0.00           O  
HETATM   13  C11 UNL     1       4.756   0.169   2.289  1.00  0.00           C  
HETATM   14  C12 UNL     1       3.472   0.902   2.177  1.00  0.00           C  
HETATM   15  O3  UNL     1       3.277   1.873   1.492  1.00  0.00           O  
HETATM   16  C13 UNL     1       2.521   0.191   3.066  1.00  0.00           C  
HETATM   17  C14 UNL     1       1.643   1.187   3.804  1.00  0.00           C  
HETATM   18  C15 UNL     1       0.742   0.546   4.788  1.00  0.00           C  
HETATM   19  C16 UNL     1      -0.266  -0.432   4.184  1.00  0.00           C  
HETATM   20  C17 UNL     1      -1.010  -1.027   5.334  1.00  0.00           C  
HETATM   21  C18 UNL     1      -2.044  -2.032   5.062  1.00  0.00           C  
HETATM   22  C19 UNL     1      -3.243  -1.733   4.296  1.00  0.00           C  
HETATM   23  C20 UNL     1      -3.273  -1.366   2.915  1.00  0.00           C  
HETATM   24  O4  UNL     1      -4.453  -0.957   2.505  1.00  0.00           O  
HETATM   25  O5  UNL     1      -2.336  -1.350   1.907  1.00  0.00           O  
HETATM   26  C21 UNL     1      -2.741  -0.927   0.573  1.00  0.00           C  
HETATM   27  C22 UNL     1      -2.466  -2.073  -0.337  1.00  0.00           C  
HETATM   28  O6  UNL     1      -3.002  -1.884  -1.642  1.00  0.00           O  
HETATM   29  C23 UNL     1      -2.860  -2.904  -2.557  1.00  0.00           C  
HETATM   30  O7  UNL     1      -2.204  -3.940  -2.171  1.00  0.00           O  
HETATM   31  C24 UNL     1      -3.379  -2.965  -3.915  1.00  0.00           C  
HETATM   32  C25 UNL     1      -3.862  -1.740  -4.561  1.00  0.00           C  
HETATM   33  C26 UNL     1      -2.859  -0.728  -4.947  1.00  0.00           C  
HETATM   34  C27 UNL     1      -1.921  -0.189  -3.917  1.00  0.00           C  
HETATM   35  C28 UNL     1      -1.074   0.873  -4.614  1.00  0.00           C  
HETATM   36  C29 UNL     1       0.001   1.471  -3.803  1.00  0.00           C  
HETATM   37  C30 UNL     1       1.062   0.435  -3.409  1.00  0.00           C  
HETATM   38  C31 UNL     1       2.179   1.082  -2.607  1.00  0.00           C  
HETATM   39  C32 UNL     1       3.250   0.072  -2.273  1.00  0.00           C  
HETATM   40  C33 UNL     1       4.366   0.702  -1.477  1.00  0.00           C  
HETATM   41  C34 UNL     1       2.704  -1.166  -1.622  1.00  0.00           C  
HETATM   42  C35 UNL     1       3.837  -2.154  -1.315  1.00  0.00           C  
HETATM   43  C36 UNL     1      -1.912   0.269   0.163  1.00  0.00           C  
HETATM   44  O8  UNL     1      -2.102   1.331   1.051  1.00  0.00           O  
HETATM   45  P1  UNL     1      -1.237   2.702   0.673  1.00  0.00           P  
HETATM   46  O9  UNL     1      -1.533   3.724   1.776  1.00  0.00           O  
HETATM   47  O10 UNL     1       0.406   2.458   0.513  1.00  0.00           O  
HETATM   48  O11 UNL     1      -1.791   3.449  -0.766  1.00  0.00           O  
HETATM   49  C37 UNL     1      -0.726   4.216  -1.232  1.00  0.00           C  
HETATM   50  C38 UNL     1      -1.057   4.940  -2.505  1.00  0.00           C  
HETATM   51  O12 UNL     1      -2.129   5.784  -2.269  1.00  0.00           O  
HETATM   52  C39 UNL     1       0.094   5.744  -3.031  1.00  0.00           C  
HETATM   53  O13 UNL     1      -0.292   6.364  -4.218  1.00  0.00           O  
HETATM   54  P2  UNL     1       0.950   7.293  -4.885  1.00  0.00           P  
HETATM   55  O14 UNL     1       2.304   6.679  -4.698  1.00  0.00           O  
HETATM   56  O15 UNL     1       0.695   7.483  -6.557  1.00  0.00           O  
HETATM   57  O16 UNL     1       0.934   8.852  -4.208  1.00  0.00           O  
HETATM   58  H1  UNL     1      -1.609  -4.097   2.367  1.00  0.00           H  
HETATM   59  H2  UNL     1      -1.173  -5.798   1.986  1.00  0.00           H  
HETATM   60  H3  UNL     1      -1.133  -4.465   0.693  1.00  0.00           H  
HETATM   61  H4  UNL     1       0.541  -3.293   2.079  1.00  0.00           H  
HETATM   62  H5  UNL     1       0.527  -4.798   3.182  1.00  0.00           H  
HETATM   63  H6  UNL     1       1.199  -6.204   1.197  1.00  0.00           H  
HETATM   64  H7  UNL     1       1.077  -4.785   0.178  1.00  0.00           H  
HETATM   65  H8  UNL     1       3.355  -5.400   0.490  1.00  0.00           H  
HETATM   66  H9  UNL     1       3.039  -3.741   0.938  1.00  0.00           H  
HETATM   67  H10 UNL     1       4.802  -4.920   2.130  1.00  0.00           H  
HETATM   68  H11 UNL     1       3.687  -6.183   2.727  1.00  0.00           H  
HETATM   69  H12 UNL     1       4.438  -4.853   4.464  1.00  0.00           H  
HETATM   70  H13 UNL     1       2.315  -5.437   4.934  1.00  0.00           H  
HETATM   71  H14 UNL     1       5.008  -2.719   3.527  1.00  0.00           H  
HETATM   72  H15 UNL     1       2.117  -2.321   4.314  1.00  0.00           H  
HETATM   73  H16 UNL     1       3.130  -0.167   5.082  1.00  0.00           H  
HETATM   74  H17 UNL     1       5.582  -0.843   4.053  1.00  0.00           H  
HETATM   75  H18 UNL     1       5.530   1.685   3.818  1.00  0.00           H  
HETATM   76  H19 UNL     1       4.678  -0.739   1.664  1.00  0.00           H  
HETATM   77  H20 UNL     1       5.625   0.773   1.959  1.00  0.00           H  
HETATM   78  H21 UNL     1       1.960  -0.551   2.497  1.00  0.00           H  
HETATM   79  H22 UNL     1       1.069   1.791   3.084  1.00  0.00           H  
HETATM   80  H23 UNL     1       2.321   1.862   4.345  1.00  0.00           H  
HETATM   81  H24 UNL     1       1.236   0.137   5.672  1.00  0.00           H  
HETATM   82  H25 UNL     1       0.084   1.376   5.193  1.00  0.00           H  
HETATM   83  H26 UNL     1       0.159  -1.189   3.548  1.00  0.00           H  
HETATM   84  H27 UNL     1      -1.000   0.168   3.603  1.00  0.00           H  
HETATM   85  H28 UNL     1      -1.500  -0.216   5.959  1.00  0.00           H  
HETATM   86  H29 UNL     1      -0.263  -1.463   6.085  1.00  0.00           H  
HETATM   87  H30 UNL     1      -2.405  -2.454   6.073  1.00  0.00           H  
HETATM   88  H31 UNL     1      -1.496  -2.949   4.662  1.00  0.00           H  
HETATM   89  H32 UNL     1      -3.799  -0.909   4.875  1.00  0.00           H  
HETATM   90  H33 UNL     1      -3.977  -2.612   4.503  1.00  0.00           H  
HETATM   91  H34 UNL     1      -3.815  -0.652   0.559  1.00  0.00           H  
HETATM   92  H35 UNL     1      -2.928  -2.987   0.075  1.00  0.00           H  
HETATM   93  H36 UNL     1      -1.367  -2.156  -0.472  1.00  0.00           H  
HETATM   94  H37 UNL     1      -2.536  -3.388  -4.554  1.00  0.00           H  
HETATM   95  H38 UNL     1      -4.142  -3.788  -3.930  1.00  0.00           H  
HETATM   96  H39 UNL     1      -4.733  -1.269  -4.013  1.00  0.00           H  
HETATM   97  H40 UNL     1      -4.345  -2.076  -5.546  1.00  0.00           H  
HETATM   98  H41 UNL     1      -3.343   0.142  -5.512  1.00  0.00           H  
HETATM   99  H42 UNL     1      -2.200  -1.169  -5.777  1.00  0.00           H  
HETATM  100  H43 UNL     1      -1.238  -0.957  -3.520  1.00  0.00           H  
HETATM  101  H44 UNL     1      -2.523   0.328  -3.158  1.00  0.00           H  
HETATM  102  H45 UNL     1      -0.712   0.452  -5.589  1.00  0.00           H  
HETATM  103  H46 UNL     1      -1.778   1.692  -4.907  1.00  0.00           H  
HETATM  104  H47 UNL     1       0.481   2.283  -4.358  1.00  0.00           H  
HETATM  105  H48 UNL     1      -0.442   1.831  -2.840  1.00  0.00           H  
HETATM  106  H49 UNL     1       0.528  -0.289  -2.749  1.00  0.00           H  
HETATM  107  H50 UNL     1       1.459  -0.090  -4.301  1.00  0.00           H  
HETATM  108  H51 UNL     1       2.590   1.956  -3.150  1.00  0.00           H  
HETATM  109  H52 UNL     1       1.730   1.451  -1.664  1.00  0.00           H  
HETATM  110  H53 UNL     1       3.704  -0.216  -3.273  1.00  0.00           H  
HETATM  111  H54 UNL     1       5.330   0.740  -2.051  1.00  0.00           H  
HETATM  112  H55 UNL     1       4.089   1.723  -1.124  1.00  0.00           H  
HETATM  113  H56 UNL     1       4.527   0.067  -0.584  1.00  0.00           H  
HETATM  114  H57 UNL     1       2.262  -0.902  -0.640  1.00  0.00           H  
HETATM  115  H58 UNL     1       1.963  -1.659  -2.285  1.00  0.00           H  
HETATM  116  H59 UNL     1       4.689  -1.993  -2.010  1.00  0.00           H  
HETATM  117  H60 UNL     1       4.212  -2.043  -0.282  1.00  0.00           H  
HETATM  118  H61 UNL     1       3.422  -3.189  -1.397  1.00  0.00           H  
HETATM  119  H62 UNL     1      -2.263   0.635  -0.822  1.00  0.00           H  
HETATM  120  H63 UNL     1      -0.845   0.005   0.031  1.00  0.00           H  
HETATM  121  H64 UNL     1       0.676   1.512   0.548  1.00  0.00           H  
HETATM  122  H65 UNL     1      -0.508   4.975  -0.432  1.00  0.00           H  
HETATM  123  H66 UNL     1       0.197   3.602  -1.314  1.00  0.00           H  
HETATM  124  H67 UNL     1      -1.335   4.195  -3.282  1.00  0.00           H  
HETATM  125  H68 UNL     1      -2.012   6.288  -1.414  1.00  0.00           H  
HETATM  126  H69 UNL     1       0.401   6.539  -2.304  1.00  0.00           H  
HETATM  127  H70 UNL     1       0.989   5.088  -3.242  1.00  0.00           H  
HETATM  128  H71 UNL     1       0.855   6.642  -7.034  1.00  0.00           H  
HETATM  129  H72 UNL     1       1.835   9.091  -3.846  1.00  0.00           H  
CONECT    1    2   58   59   60
CONECT    2    3   61   62
CONECT    3    4   63   64
CONECT    4    5   65   66
CONECT    5    6   67   68
CONECT    6    7    8   69
CONECT    7   70
CONECT    8    9    9   71
CONECT    9   10   72
CONECT   10   11   16   73
CONECT   11   12   13   74
CONECT   12   75
CONECT   13   14   76   77
CONECT   14   15   15   16
CONECT   16   17   78
CONECT   17   18   79   80
CONECT   18   19   81   82
CONECT   19   20   83   84
CONECT   20   21   85   86
CONECT   21   22   87   88
CONECT   22   23   89   90
CONECT   23   24   24   25
CONECT   25   26
CONECT   26   27   43   91
CONECT   27   28   92   93
CONECT   28   29
CONECT   29   30   30   31
CONECT   31   32   94   95
CONECT   32   33   96   97
CONECT   33   34   98   99
CONECT   34   35  100  101
CONECT   35   36  102  103
CONECT   36   37  104  105
CONECT   37   38  106  107
CONECT   38   39  108  109
CONECT   39   40   41  110
CONECT   40  111  112  113
CONECT   41   42  114  115
CONECT   42  116  117  118
CONECT   43   44  119  120
CONECT   44   45
CONECT   45   46   46   47   48
CONECT   47  121
CONECT   48   49
CONECT   49   50  122  123
CONECT   50   51   52  124
CONECT   51  125
CONECT   52   53  126  127
CONECT   53   54
CONECT   54   55   55   56   57
CONECT   56  128
CONECT   57  129
END

HMDB0274358
     RDKit          3D
PGP(a-13:0/PGE1)
129129  0  0  0  0  0  0  0  0999 V2000
   -0.9703   -4.7522    1.7401 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5003   -4.3859    2.1501 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4353   -5.0896    1.2342 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8525   -4.8118    1.3721 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7070   -5.0455    2.5113 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5921   -4.3977    3.8181 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4756   -4.5491    4.5738 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0117   -2.9442    3.7804 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1423   -2.0178    4.0571 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4001   -0.5680    4.0632 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7836   -0.1434    3.7631 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0001    1.0994    4.4059 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7564    0.1692    2.2892 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4718    0.9016    2.1770 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2767    1.8733    1.4923 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5211    0.1913    3.0664 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6434    1.1868    3.8043 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7419    0.5463    4.7876 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2661   -0.4319    4.1840 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0103   -1.0275    5.3343 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0437   -2.0316    5.0617 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2427   -1.7333    4.2962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2727   -1.3655    2.9146 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4529   -0.9575    2.5053 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3360   -1.3498    1.9071 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7414   -0.9274    0.5728 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4655   -2.0732   -0.3372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0018   -1.8837   -1.6416 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8597   -2.9044   -2.5569 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2045   -3.9403   -2.1715 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3791   -2.9651   -3.9151 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8618   -1.7396   -4.5612 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8591   -0.7276   -4.9466 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9211   -0.1886   -3.9167 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0744    0.8730   -4.6143 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0014    1.4710   -3.8030 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0622    0.4351   -3.4086 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1792    1.0823   -2.6070 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2502    0.0718   -2.2735 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3664    0.7021   -1.4769 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7039   -1.1660   -1.6218 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8368   -2.1539   -1.3155 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9118    0.2693    0.1634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1017    1.3311    1.0509 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2372    2.7021    0.6731 P   0  0  0  0  0  5  0  0  0  0  0  0
   -1.5334    3.7237    1.7760 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4055    2.4579    0.5127 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7908    3.4485   -0.7659 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7258    4.2156   -1.2324 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0569    4.9397   -2.5055 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1287    5.7842   -2.2685 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0940    5.7436   -3.0309 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2916    6.3644   -4.2182 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9498    7.2932   -4.8847 P   0  0  0  0  0  5  0  0  0  0  0  0
    2.3038    6.6790   -4.6978 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6955    7.4828   -6.5567 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9340    8.8516   -4.2079 O   0  0  0  0  0  0  0  0  0  0  0  0
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    5.3297    0.7397   -2.0511 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0891    1.7232   -1.1240 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5274    0.0670   -0.5840 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2618   -0.9017   -0.6398 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9627   -1.6589   -2.2847 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6891   -1.9932   -2.0102 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2118   -2.0430   -0.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4220   -3.1887   -1.3970 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2628    0.6347   -0.8219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8447    0.0045    0.0310 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6757    1.5115    0.5478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5083    4.9751   -0.4317 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1974    3.6018   -1.3143 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3347    4.1950   -3.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0119    6.2877   -1.4137 H   0  0  0  0  0  0  0  0  0  0  0  0
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    1.8352    9.0906   -3.8459 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
[(2S)-2-Hydroxy-3-({hydroxy[(2R)-2-({7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoyl}oxy)-3-[(10-methyldodecanoyl)oxy]propoxy]phosphoryl}oxy)propoxy]phosphonate	Generator

Chemical Formula

C₃₉H₇₂O₁₆P₂

Average Molecular Weight

858.937

Monoisotopic Molecular Weight

858.429560234

IUPAC Name

[(2S)-2-hydroxy-3-({hydroxy[(2R)-2-({7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoyl}oxy)-3-[(10-methyldodecanoyl)oxy]propoxy]phosphoryl}oxy)propoxy]phosphonic acid

Traditional Name

(2S)-2-hydroxy-3-{[hydroxy((2R)-2-({7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoyl}oxy)-3-[(10-methyldodecanoyl)oxy]propoxy)phosphoryl]oxy}propoxyphosphonic acid

CAS Registry Number

Not Available

SMILES

CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCC(C)CC)COP(O)(=O)OC[C@@H](O)COP(O)(O)=O

InChI Identifier

InChI=1S/C39H72O16P2/c1-4-6-13-19-31(40)23-24-35-34(36(42)25-37(35)43)20-15-11-12-17-22-39(45)55-33(29-54-57(49,50)53-27-32(41)26-52-56(46,47)48)28-51-38(44)21-16-10-8-7-9-14-18-30(3)5-2/h23-24,30-35,37,40-41,43H,4-22,25-29H2,1-3H3,(H,49,50)(H2,46,47,48)/b24-23+/t30?,31-,32-,33+,34+,35+,37+/m0/s1

InChI Key

AYKXPJAOHZSSJR-UVTVNDECSA-N

Chemical Taxonomy

Classification

Not classified

Ontology

Not Available

Not Available

Not Available

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	3.98	ALOGPS
logP	6.65	ChemAxon
logS	-5.5	ALOGPS
pKa (Strongest Acidic)	1.36	ChemAxon
pKa (Strongest Basic)	-1.6	ChemAxon
Physiological Charge	-3	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	252.88 Å²	ChemAxon
Rotatable Bond Count	37	ChemAxon
Refractivity	213.56 m³·mol⁻¹	ChemAxon
Polarizability	92.01 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	288.181	32859911
AllCCS	[M+H-H2O]+	288.346	32859911
AllCCS	[M+Na]+	287.929	32859911
AllCCS	[M+NH4]+	287.991	32859911
AllCCS	[M-H]-	288.232	32859911
AllCCS	[M+Na-2H]-	294.46	32859911
AllCCS	[M+HCOO]-	301.322	32859911
DeepCCS	[M+H]+	285.324	30932474
DeepCCS	[M-H]-	282.978	30932474
DeepCCS	[M-2H]-	316.882	30932474
DeepCCS	[M+Na]+	291.49	30932474

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
PGP(a-13:0/PGE1)	CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCC(C)CC)COP(O)(=O)OC[C@@H](O)COP(O)(O)=O	5288.1	Standard polar	33892256
PGP(a-13:0/PGE1)	CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCC(C)CC)COP(O)(=O)OC[C@@H](O)COP(O)(O)=O	4776.0	Standard non polar	33892256
PGP(a-13:0/PGE1)	CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCC(C)CC)COP(O)(=O)OC[C@@H](O)COP(O)(O)=O	5918.6	Semi standard non polar	33892256

Spectra

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PGP(a-13:0/PGE1) 10V, Positive-QTOF	splash10-006x-0000031590-e99adb30b864ff5af00e	2021-10-19	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PGP(a-13:0/PGE1) 20V, Positive-QTOF	splash10-0006-4200015920-c0137cf990bc9e4b6792	2021-10-19	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PGP(a-13:0/PGE1) 40V, Positive-QTOF	splash10-0k96-7902783000-0e3b607ab2337c15d420	2021-10-19	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PGP(a-13:0/PGE1) 10V, Negative-QTOF	splash10-052r-0000000290-a0f9567f40b2eb53264f	2021-10-19	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PGP(a-13:0/PGE1) 20V, Negative-QTOF	splash10-002r-6012001940-abbee09fb4922857378d	2021-10-19	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PGP(a-13:0/PGE1) 40V, Negative-QTOF	splash10-004i-9033001000-db47d7f4ed9cfc808895	2021-10-19	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Hajeyah AA, Griffiths WJ, Wang Y, Finch AJ, O'Donnell VB: The Biosynthesis of Enzymatically Oxidized Lipids. Front Endocrinol (Lausanne). 2020 Nov 19;11:591819. doi: 10.3389/fendo.2020.591819. eCollection 2020. [PubMed:33329396 ]

Showing metabocard for PGP(a-13:0/PGE1) (HMDB0274358)

MOL for HMDB0274358 (PGP(a-13:0/PGE1))

3D MOL for HMDB0274358 (PGP(a-13:0/PGE1))

3D SDF for HMDB0274358 (PGP(a-13:0/PGE1))

3D-SDF for HMDB0274358 (PGP(a-13:0/PGE1))

PDB for HMDB0274358 (PGP(a-13:0/PGE1))

3D PDB for HMDB0274358 (PGP(a-13:0/PGE1))

SMILES for HMDB0274358 (PGP(a-13:0/PGE1))

INCHI for HMDB0274358 (PGP(a-13:0/PGE1))

Structure for HMDB0274358 (PGP(a-13:0/PGE1))

3D Structure for HMDB0274358 (PGP(a-13:0/PGE1))

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

MS/MS Spectra