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Showing metabocard for CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) (HMDB0292459)

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Record Information
Version5.0
StatusPredicted
Creation Date2021-09-17 07:30:05 UTC
Update Date2022-11-30 20:08:06 UTC
HMDB IDHMDB0292459
Secondary Accession NumbersNone
Metabolite Identification
Common NameCDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2)
DescriptionCDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) is an oxidized CDP-diacylglycerol (CDP-DG). Oxidized CDP-diacylglycerols are glycerophospholipids in which a cytidine diphosphate moiety occupies a glycerol substitution site and at least one of the fatty acyl chains has undergone oxidation. As all oxidized lipids, oxidized CDP-diacylglycerols belong to a group of biomolecules that have a role as signaling molecules. The biosynthesis of oxidized lipids is mediated by several enzymatic families, including cyclooxygenases (COX), lipoxygenases (LOX) and cytochrome P450s (CYP). Non-enzymatically oxidized lipids are produced by uncontrolled oxidation through free radicals and are considered harmful to human health (PMID: 33329396 ). As is the case with diacylglycerols, CDP-diacylglycerols can have many different combinations of fatty acids of varying lengths, saturation and degrees of oxidation attached at the C-1 and C-2 positions. CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2), in particular, consists of one chain of one 4Z,7Z,10Z,13Z,16Z-docosapentaenoyl at the C-1 position and one chain of Prostaglandin J2 at the C-2 position. Phospholipids are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling. Similarly to what occurs with phospholipids, the fatty acid distribution at the C-1 and C-2 positions of glycerol within oxidized phospholipids is continually in flux, owing to phospholipid degradation and the continuous phospholipid remodeling that occurs while these molecules are in membranes. Oxidized CDP-DGs can be synthesized via three different routes. In one route, the oxidized CDP-DG is synthetized de novo following the same mechanisms as for CDP-DGs but incorporating oxidized acyl chains (PMID: 33329396 ). An alternative is the transacylation of one of the non-oxidized acyl chains with an oxidized acylCoA (PMID: 33329396 ). The third pathway results from the oxidation of the acyl chain while still attached to the CDP-DG backbone, mainly through the action of LOX (PMID: 33329396 ).
Structure
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MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))


  Mrv1652309172109302D          

 76 78  0  0  1  0            999 V2000
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M  END
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3D MOL for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))

HMDB0292459
     RDKit          3D
CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2)
157159  0  0  0  0  0  0  0  0999 V2000
   18.7913    0.8724   -0.1105 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.8142    0.1710    0.7751 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.2466    1.0950    1.7949 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.5030    2.2594    1.2245 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3137    1.8210    0.3532 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6885    3.0574   -0.1273 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4550    3.3768    0.1249 C   0  0  0  0  0  0  0  0  0  0  0  0
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   11.3702    2.2379    0.0692 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
Download

3D SDF for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))


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    6.6145    3.5891    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.0204    7.0316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
> <DATABASE_ID>
HMDB0292459

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCC(=O)OC[C@@H]1COP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@@H](CC=CCCCC(=O)O1)C=CC(=O)[C@H](\C=C\[C@@H](O)CCCCC)[C@H](O)[C@@H]2O)N1C=CC(N)=NC1=O

> <INCHI_IDENTIFIER>
InChI=1S/C54H81N3O17P2/c1-3-5-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-27-31-49(60)69-39-44-40-70-75(65,66)74-76(67,68)71-41-47-52(63)51(62)45(35-34-43(58)30-25-6-4-2)46(59)36-33-42(29-26-23-24-28-32-50(61)72-44)53(73-47)57-38-37-48(55)56-54(57)64/h9-10,12-13,15-16,18-19,21-23,26,33-38,42-45,47,51-53,58,62-63H,3-8,11,14,17,20,24-25,27-32,39-41H2,1-2H3,(H,65,66)(H,67,68)(H2,55,56,64)/b10-9-,13-12-,16-15-,19-18-,22-21-,26-23-,35-34+,36-33?/t42-,43-,44+,45-,47+,51-,52+,53+/m0/s1

> <INCHI_KEY>
IITWNBUGUCCPGI-WMLGFOFDSA-N

> <FORMULA>
C54H81N3O17P2

> <MOLECULAR_WEIGHT>
1106.194

> <EXACT_MASS>
1105.504122156

> <JCHEM_ACCEPTOR_COUNT>
14

> <JCHEM_ATOM_COUNT>
157

> <JCHEM_AVERAGE_POLARIZABILITY>
115.69887913112484

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
[(1R,9R,15Z,18S,22R,23S,24S,26R)-26-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-4,6,23,24-tetrahydroxy-22-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-4,6,11,21-tetraoxo-3,5,7,10,25-pentaoxa-4lambda5,6lambda5-diphosphabicyclo[16.6.2]hexacosa-15,19-dien-9-yl]methyl (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate

> <ALOGPS_LOGP>
5.17

> <JCHEM_LOGP>
8.193465239649699

> <ALOGPS_LOGS>
-5.09

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
3.2719876891721595

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8717053965869628

> <JCHEM_PKA_STRONGEST_BASIC>
0.3666027227537346

> <JCHEM_POLAR_SURFACE_AREA>
300.57

> <JCHEM_REFRACTIVITY>
295.53799999999995

> <JCHEM_ROTATABLE_BOND_COUNT>
25

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.95e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(1R,9R,15Z,18S,22R,23S,24S,26R)-26-(4-amino-2-oxopyrimidin-1-yl)-4,6,23,24-tetrahydroxy-22-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-4,6,11,21-tetraoxo-3,5,7,10,25-pentaoxa-4lambda5,6lambda5-diphosphabicyclo[16.6.2]hexacosa-15,19-dien-9-yl]methyl (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))

HMDB0292459
     RDKit          3D
CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2)
157159  0  0  0  0  0  0  0  0999 V2000
   18.7913    0.8724   -0.1105 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.8142    0.1710    0.7751 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.2466    1.0950    1.7949 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.5030    2.2594    1.2245 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3137    1.8210    0.3532 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6885    3.0574   -0.1273 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4550    3.3768    0.1249 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -8.4594   -0.8234    1.8246 C   0  0  2  0  0  0  0  0  0  0  0  0
   -9.1288   -0.9024    3.0757 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3918    0.2058    1.8476 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -4.8298    0.2304    2.9371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5426    0.4628    0.6930 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7972   -1.3972   -0.6761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4107   -2.5358   -3.1710 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7578   -4.8979   -3.8045 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4354   -7.2226   -2.7547 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0806   -7.6743   -1.6745 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7483    0.4319   -0.9493 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1240   -0.3125   -3.0805 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2255   -2.2925   -2.4286 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4035   -1.1797    1.1317 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9933    1.1000   -0.4789 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7476    0.3898    0.5077 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2889    2.8125   -0.6957 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8849    1.8698   -2.4918 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4066    4.0305   -0.4441 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8916    3.2774    1.1042 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.4693    1.3064    0.5887 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0037    2.1675   -0.8945 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.5796    2.4883    0.8557 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.3032    3.2769    1.8984 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1956    4.2691   -0.8821 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.9787    5.0651    0.2730 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.9829    4.9545    0.5443 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.8942    4.9027    2.0448 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.8063    6.2578    0.8399 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9237   -1.8252    1.7781 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9499   -0.3697    3.0783 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1540    0.3693    2.9526 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9928    2.0412    1.2539 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4632    1.1511   -2.6333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1089   -0.1259   -3.6554 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2355   -1.5650   -3.2943 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2988   -0.8594   -2.1325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7899    0.8521   -0.3135 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9710    1.6523   -1.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0905    1.2821   -2.3759 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3528    2.4030   -2.8646 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4458    3.4176   -1.3844 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1241    3.7829   -1.0033 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
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  9 10  2  0
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 33 35  1  0
 33 36  1  0
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 40 41  1  0
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 40 49  1  0
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 51 52  1  0
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 72154  1  0
 72155  1  0
 73156  1  0
 73157  1  0
M  END
Download

PDB for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))

HEADER    PROTEIN                                 17-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-SEP-21         0                                  
HETATM    1  N   UNK     0      -8.304  14.140   0.000  0.00  0.00           N+0
HETATM    2  C   UNK     0      -6.947  13.293   0.000  0.00  0.00           C+0
HETATM    3  N   UNK     0      -5.599  14.038   0.000  0.00  0.00           N+0
HETATM    4  C   UNK     0      -4.280  13.244   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      -3.640  14.729   0.000  0.00  0.00           O+0
HETATM    6  N   UNK     0      -4.308  11.704   0.000  0.00  0.00           N+0
HETATM    7  C   UNK     0      -5.656  10.959   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -6.975  11.753   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.989  10.910   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -1.901  12.079   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      -0.338  12.509   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.192  11.090   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       1.961  11.746   0.000  0.00  0.00           O+0
HETATM   14  P   UNK     0       3.463  11.256   0.000  0.00  0.00           P+0
HETATM   15  O   UNK     0       3.802  12.914   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0       4.924  12.079   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0       4.365   9.934   0.000  0.00  0.00           O+0
HETATM   18  P   UNK     0       4.444   8.356   0.000  0.00  0.00           P+0
HETATM   19  O   UNK     0       6.145   8.220   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       5.787   9.359   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       4.076   6.796   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       3.313   5.400   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.912   4.649   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.002   3.170   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       4.770   2.491   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       5.803   1.160   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       7.391   1.138   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       5.582  -0.411   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       6.356  -1.789   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       5.528  -3.160   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       6.372  -4.491   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       7.911  -4.427   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       8.625  -3.062   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      10.163  -2.998   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      10.988  -4.298   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      10.275  -5.663   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      11.100  -6.963   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      12.639  -6.899   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      13.464  -8.199   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      15.002  -8.134   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      15.716  -6.770   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      17.255  -6.705   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      17.968  -5.341   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      17.143  -4.040   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      17.857  -2.676   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      17.031  -1.375   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      17.745  -0.011   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      16.920   1.290   0.000  0.00  0.00           C+0
HETATM   49  O   UNK     0       0.844   3.475   0.000  0.00  0.00           O+0
HETATM   50  C   UNK     0      -0.329   2.412   0.000  0.00  0.00           C+0
HETATM   51  O   UNK     0      -0.428   0.795   0.000  0.00  0.00           O+0
HETATM   52  C   UNK     0      -1.715   1.635   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      -3.126   2.348   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      -4.167   3.562   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      -4.725   5.070   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      -4.795   6.657   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      -4.667   8.255   0.000  0.00  0.00           C+0
HETATM   58  C   UNK     0      -3.518   9.387   0.000  0.00  0.00           C+0
HETATM   59  C   UNK     0      -2.494   8.181   0.000  0.00  0.00           C+0
HETATM   60  C   UNK     0      -1.428   7.029   0.000  0.00  0.00           C+0
HETATM   61  C   UNK     0       0.142   7.105   0.000  0.00  0.00           C+0
HETATM   62  O   UNK     0       1.522   6.593   0.000  0.00  0.00           O+0
HETATM   63  C   UNK     0       0.876   8.435   0.000  0.00  0.00           C+0
HETATM   64  C   UNK     0       2.183   7.682   0.000  0.00  0.00           C+0
HETATM   65  C   UNK     0       2.982   6.435   0.000  0.00  0.00           C+0
HETATM   66  C   UNK     0       4.700   5.600   0.000  0.00  0.00           C+0
HETATM   67  O   UNK     0       4.165   3.914   0.000  0.00  0.00           O+0
HETATM   68  C   UNK     0       6.548   5.448   0.000  0.00  0.00           C+0
HETATM   69  C   UNK     0       8.275   5.206   0.000  0.00  0.00           C+0
HETATM   70  C   UNK     0       9.738   5.993   0.000  0.00  0.00           C+0
HETATM   71  C   UNK     0      11.269   5.600   0.000  0.00  0.00           C+0
HETATM   72  C   UNK     0      12.347   6.700   0.000  0.00  0.00           C+0
HETATM   73  C   UNK     0       0.973  11.592   0.000  0.00  0.00           C+0
HETATM   74  O   UNK     0       1.905  13.126   0.000  0.00  0.00           O+0
HETATM   75  C   UNK     0       1.369   9.940   0.000  0.00  0.00           C+0
HETATM   76  O   UNK     0       2.705  10.413   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    8                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7    9                                                  
CONECT    7    6    8                                                       
CONECT    8    7    2                                                       
CONECT    9    6   10   58                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   73                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   16   17                                             
CONECT   15   14                                                            
CONECT   16   14                                                            
CONECT   17   14   18                                                       
CONECT   18   17   19   20   21                                             
CONECT   19   18                                                            
CONECT   20   18                                                            
CONECT   21   18   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   49                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47                                                            
CONECT   49   23   50                                                       
CONECT   50   49   51   52                                                  
CONECT   51   50                                                            
CONECT   52   50   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56   58                                                       
CONECT   58   57    9   59                                                  
CONECT   59   58   60                                                       
CONECT   60   59   61                                                       
CONECT   61   60   62   63                                                  
CONECT   62   61                                                            
CONECT   63   61   64   75                                                  
CONECT   64   63   65                                                       
CONECT   65   64   66                                                       
CONECT   66   65   67   68                                                  
CONECT   67   66                                                            
CONECT   68   66   69                                                       
CONECT   69   68   70                                                       
CONECT   70   69   71                                                       
CONECT   71   70   72                                                       
CONECT   72   71                                                            
CONECT   73   11   74   75                                                  
CONECT   74   73                                                            
CONECT   75   73   63   76                                                  
CONECT   76   75                                                            
MASTER        0    0    0    0    0    0    0    0   76    0  156    0
END
Download

3D PDB for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))

COMPND    HMDB0292459
HETATM    1  C1  UNL     1      18.791   0.872  -0.110  1.00  0.00           C  
HETATM    2  C2  UNL     1      17.814   0.171   0.775  1.00  0.00           C  
HETATM    3  C3  UNL     1      17.247   1.095   1.795  1.00  0.00           C  
HETATM    4  C4  UNL     1      16.503   2.259   1.224  1.00  0.00           C  
HETATM    5  C5  UNL     1      15.314   1.821   0.353  1.00  0.00           C  
HETATM    6  C6  UNL     1      14.689   3.057  -0.127  1.00  0.00           C  
HETATM    7  C7  UNL     1      13.455   3.377   0.125  1.00  0.00           C  
HETATM    8  C8  UNL     1      12.529   2.554   0.912  1.00  0.00           C  
HETATM    9  C9  UNL     1      11.370   2.238   0.069  1.00  0.00           C  
HETATM   10  C10 UNL     1      11.001   1.054  -0.260  1.00  0.00           C  
HETATM   11  C11 UNL     1      11.704  -0.179   0.170  1.00  0.00           C  
HETATM   12  C12 UNL     1      12.132  -0.905  -1.073  1.00  0.00           C  
HETATM   13  C13 UNL     1      11.725  -2.115  -1.326  1.00  0.00           C  
HETATM   14  C14 UNL     1      10.819  -2.942  -0.477  1.00  0.00           C  
HETATM   15  C15 UNL     1       9.623  -3.237  -1.290  1.00  0.00           C  
HETATM   16  C16 UNL     1       8.414  -2.898  -0.942  1.00  0.00           C  
HETATM   17  C17 UNL     1       8.118  -2.179   0.314  1.00  0.00           C  
HETATM   18  C18 UNL     1       7.458  -0.880   0.042  1.00  0.00           C  
HETATM   19  C19 UNL     1       6.269  -0.592   0.517  1.00  0.00           C  
HETATM   20  C20 UNL     1       5.469  -1.493   1.352  1.00  0.00           C  
HETATM   21  C21 UNL     1       4.143  -1.810   0.666  1.00  0.00           C  
HETATM   22  C22 UNL     1       3.331  -0.570   0.497  1.00  0.00           C  
HETATM   23  O1  UNL     1       3.721   0.509   0.994  1.00  0.00           O  
HETATM   24  O2  UNL     1       2.146  -0.563  -0.198  1.00  0.00           O  
HETATM   25  C23 UNL     1       1.308   0.545  -0.404  1.00  0.00           C  
HETATM   26  C24 UNL     1       0.784   1.028   0.914  1.00  0.00           C  
HETATM   27  C25 UNL     1       0.208  -0.196   1.628  1.00  0.00           C  
HETATM   28  O3  UNL     1      -0.879  -0.629   0.907  1.00  0.00           O  
HETATM   29  P1  UNL     1      -1.112  -2.296   1.014  1.00  0.00           P  
HETATM   30  O4  UNL     1       0.237  -2.961   0.834  1.00  0.00           O  
HETATM   31  O5  UNL     1      -2.128  -2.831  -0.230  1.00  0.00           O  
HETATM   32  O6  UNL     1      -1.704  -2.712   2.526  1.00  0.00           O  
HETATM   33  P2  UNL     1      -2.973  -1.772   3.045  1.00  0.00           P  
HETATM   34  O7  UNL     1      -3.855  -2.653   3.936  1.00  0.00           O  
HETATM   35  O8  UNL     1      -2.477  -0.424   3.951  1.00  0.00           O  
HETATM   36  O9  UNL     1      -3.971  -1.206   1.803  1.00  0.00           O  
HETATM   37  C26 UNL     1      -5.118  -0.693   2.405  1.00  0.00           C  
HETATM   38  C27 UNL     1      -6.065  -0.307   1.260  1.00  0.00           C  
HETATM   39  O10 UNL     1      -6.349  -1.463   0.594  1.00  0.00           O  
HETATM   40  C28 UNL     1      -5.909  -1.528  -0.728  1.00  0.00           C  
HETATM   41  N1  UNL     1      -6.121  -2.892  -1.166  1.00  0.00           N  
HETATM   42  C29 UNL     1      -6.365  -3.296  -2.402  1.00  0.00           C  
HETATM   43  C30 UNL     1      -6.558  -4.608  -2.770  1.00  0.00           C  
HETATM   44  C31 UNL     1      -6.493  -5.577  -1.782  1.00  0.00           C  
HETATM   45  N2  UNL     1      -6.684  -6.961  -2.098  1.00  0.00           N  
HETATM   46  N3  UNL     1      -6.246  -5.169  -0.531  1.00  0.00           N  
HETATM   47  C32 UNL     1      -6.066  -3.882  -0.224  1.00  0.00           C  
HETATM   48  O11 UNL     1      -5.833  -3.540   0.985  1.00  0.00           O  
HETATM   49  C33 UNL     1      -6.522  -0.481  -1.590  1.00  0.00           C  
HETATM   50  C34 UNL     1      -7.842  -0.828  -2.148  1.00  0.00           C  
HETATM   51  C35 UNL     1      -8.712  -1.670  -1.671  1.00  0.00           C  
HETATM   52  C36 UNL     1      -9.096  -1.902  -0.311  1.00  0.00           C  
HETATM   53  O12 UNL     1      -9.189  -3.077   0.134  1.00  0.00           O  
HETATM   54  C37 UNL     1      -9.417  -0.818   0.695  1.00  0.00           C  
HETATM   55  C38 UNL     1      -9.694   0.458   0.040  1.00  0.00           C  
HETATM   56  C39 UNL     1     -10.962   0.960   0.026  1.00  0.00           C  
HETATM   57  C40 UNL     1     -11.268   2.250  -0.629  1.00  0.00           C  
HETATM   58  O13 UNL     1     -11.703   1.965  -1.944  1.00  0.00           O  
HETATM   59  C41 UNL     1     -12.292   3.056   0.084  1.00  0.00           C  
HETATM   60  C42 UNL     1     -13.593   2.300   0.150  1.00  0.00           C  
HETATM   61  C43 UNL     1     -14.646   3.112   0.878  1.00  0.00           C  
HETATM   62  C44 UNL     1     -14.888   4.407   0.168  1.00  0.00           C  
HETATM   63  C45 UNL     1     -15.968   5.169   0.950  1.00  0.00           C  
HETATM   64  C46 UNL     1      -8.459  -0.823   1.825  1.00  0.00           C  
HETATM   65  O14 UNL     1      -9.129  -0.902   3.076  1.00  0.00           O  
HETATM   66  C47 UNL     1      -7.392   0.206   1.848  1.00  0.00           C  
HETATM   67  O15 UNL     1      -7.746   1.444   1.384  1.00  0.00           O  
HETATM   68  C48 UNL     1      -5.599   0.028  -2.655  1.00  0.00           C  
HETATM   69  C49 UNL     1      -4.272  -0.632  -2.694  1.00  0.00           C  
HETATM   70  C50 UNL     1      -3.173  -0.218  -2.101  1.00  0.00           C  
HETATM   71  C51 UNL     1      -3.010   1.081  -1.373  1.00  0.00           C  
HETATM   72  C52 UNL     1      -1.909   1.907  -1.941  1.00  0.00           C  
HETATM   73  C53 UNL     1      -1.378   2.927  -0.995  1.00  0.00           C  
HETATM   74  C54 UNL     1      -1.213   2.500   0.410  1.00  0.00           C  
HETATM   75  O16 UNL     1      -2.305   2.533   1.100  1.00  0.00           O  
HETATM   76  O17 UNL     1      -0.033   2.120   0.907  1.00  0.00           O  
HETATM   77  H1  UNL     1      18.736   0.359  -1.116  1.00  0.00           H  
HETATM   78  H2  UNL     1      18.632   1.953  -0.238  1.00  0.00           H  
HETATM   79  H3  UNL     1      19.842   0.661   0.252  1.00  0.00           H  
HETATM   80  H4  UNL     1      18.354  -0.656   1.296  1.00  0.00           H  
HETATM   81  H5  UNL     1      16.993  -0.269   0.163  1.00  0.00           H  
HETATM   82  H6  UNL     1      18.065   1.531   2.436  1.00  0.00           H  
HETATM   83  H7  UNL     1      16.564   0.566   2.494  1.00  0.00           H  
HETATM   84  H8  UNL     1      17.167   2.947   0.677  1.00  0.00           H  
HETATM   85  H9  UNL     1      16.095   2.836   2.107  1.00  0.00           H  
HETATM   86  H10 UNL     1      15.799   1.242  -0.488  1.00  0.00           H  
HETATM   87  H11 UNL     1      14.726   1.159   0.969  1.00  0.00           H  
HETATM   88  H12 UNL     1      15.350   3.718  -0.732  1.00  0.00           H  
HETATM   89  H13 UNL     1      13.083   4.332  -0.282  1.00  0.00           H  
HETATM   90  H14 UNL     1      12.100   3.296   1.701  1.00  0.00           H  
HETATM   91  H15 UNL     1      12.950   1.760   1.508  1.00  0.00           H  
HETATM   92  H16 UNL     1      10.784   3.086  -0.303  1.00  0.00           H  
HETATM   93  H17 UNL     1      10.100   0.925  -0.912  1.00  0.00           H  
HETATM   94  H18 UNL     1      11.065  -0.791   0.832  1.00  0.00           H  
HETATM   95  H19 UNL     1      12.636   0.098   0.699  1.00  0.00           H  
HETATM   96  H20 UNL     1      12.797  -0.389  -1.760  1.00  0.00           H  
HETATM   97  H21 UNL     1      12.089  -2.576  -2.272  1.00  0.00           H  
HETATM   98  H22 UNL     1      11.383  -3.957  -0.393  1.00  0.00           H  
HETATM   99  H23 UNL     1      10.686  -2.630   0.535  1.00  0.00           H  
HETATM  100  H24 UNL     1       9.812  -3.777  -2.239  1.00  0.00           H  
HETATM  101  H25 UNL     1       7.566  -3.159  -1.616  1.00  0.00           H  
HETATM  102  H26 UNL     1       8.996  -1.954   0.945  1.00  0.00           H  
HETATM  103  H27 UNL     1       7.484  -2.872   0.922  1.00  0.00           H  
HETATM  104  H28 UNL     1       8.003  -0.133  -0.592  1.00  0.00           H  
HETATM  105  H29 UNL     1       5.841   0.399   0.275  1.00  0.00           H  
HETATM  106  H30 UNL     1       5.165  -0.890   2.283  1.00  0.00           H  
HETATM  107  H31 UNL     1       5.936  -2.374   1.763  1.00  0.00           H  
HETATM  108  H32 UNL     1       3.623  -2.598   1.211  1.00  0.00           H  
HETATM  109  H33 UNL     1       4.362  -2.209  -0.360  1.00  0.00           H  
HETATM  110  H34 UNL     1       0.464   0.169  -1.028  1.00  0.00           H  
HETATM  111  H35 UNL     1       1.928   1.306  -0.943  1.00  0.00           H  
HETATM  112  H36 UNL     1       1.684   1.295   1.555  1.00  0.00           H  
HETATM  113  H37 UNL     1       0.973  -0.997   1.672  1.00  0.00           H  
HETATM  114  H38 UNL     1      -0.087   0.029   2.657  1.00  0.00           H  
HETATM  115  H39 UNL     1      -1.549  -2.916  -1.041  1.00  0.00           H  
HETATM  116  H40 UNL     1      -1.937  -0.730   4.731  1.00  0.00           H  
HETATM  117  H41 UNL     1      -5.580  -1.466   3.046  1.00  0.00           H  
HETATM  118  H42 UNL     1      -4.830   0.230   2.937  1.00  0.00           H  
HETATM  119  H43 UNL     1      -5.543   0.463   0.693  1.00  0.00           H  
HETATM  120  H44 UNL     1      -4.797  -1.397  -0.676  1.00  0.00           H  
HETATM  121  H45 UNL     1      -6.411  -2.536  -3.171  1.00  0.00           H  
HETATM  122  H46 UNL     1      -6.758  -4.898  -3.805  1.00  0.00           H  
HETATM  123  H47 UNL     1      -7.435  -7.223  -2.755  1.00  0.00           H  
HETATM  124  H48 UNL     1      -6.081  -7.674  -1.674  1.00  0.00           H  
HETATM  125  H49 UNL     1      -6.748   0.432  -0.949  1.00  0.00           H  
HETATM  126  H50 UNL     1      -8.124  -0.313  -3.080  1.00  0.00           H  
HETATM  127  H51 UNL     1      -9.226  -2.293  -2.429  1.00  0.00           H  
HETATM  128  H52 UNL     1     -10.404  -1.180   1.132  1.00  0.00           H  
HETATM  129  H53 UNL     1      -8.993   1.100  -0.479  1.00  0.00           H  
HETATM  130  H54 UNL     1     -11.748   0.390   0.508  1.00  0.00           H  
HETATM  131  H55 UNL     1     -10.289   2.813  -0.696  1.00  0.00           H  
HETATM  132  H56 UNL     1     -10.885   1.870  -2.492  1.00  0.00           H  
HETATM  133  H57 UNL     1     -12.407   4.030  -0.444  1.00  0.00           H  
HETATM  134  H58 UNL     1     -11.892   3.277   1.104  1.00  0.00           H  
HETATM  135  H59 UNL     1     -13.469   1.306   0.589  1.00  0.00           H  
HETATM  136  H60 UNL     1     -14.004   2.167  -0.894  1.00  0.00           H  
HETATM  137  H61 UNL     1     -15.580   2.488   0.856  1.00  0.00           H  
HETATM  138  H62 UNL     1     -14.303   3.277   1.898  1.00  0.00           H  
HETATM  139  H63 UNL     1     -15.196   4.269  -0.882  1.00  0.00           H  
HETATM  140  H64 UNL     1     -13.979   5.065   0.273  1.00  0.00           H  
HETATM  141  H65 UNL     1     -16.983   4.955   0.544  1.00  0.00           H  
HETATM  142  H66 UNL     1     -15.894   4.903   2.045  1.00  0.00           H  
HETATM  143  H67 UNL     1     -15.806   6.258   0.840  1.00  0.00           H  
HETATM  144  H68 UNL     1      -7.924  -1.825   1.778  1.00  0.00           H  
HETATM  145  H69 UNL     1      -9.950  -0.370   3.078  1.00  0.00           H  
HETATM  146  H70 UNL     1      -7.154   0.369   2.953  1.00  0.00           H  
HETATM  147  H71 UNL     1      -6.993   2.041   1.254  1.00  0.00           H  
HETATM  148  H72 UNL     1      -5.463   1.151  -2.633  1.00  0.00           H  
HETATM  149  H73 UNL     1      -6.109  -0.126  -3.655  1.00  0.00           H  
HETATM  150  H74 UNL     1      -4.236  -1.565  -3.294  1.00  0.00           H  
HETATM  151  H75 UNL     1      -2.299  -0.859  -2.132  1.00  0.00           H  
HETATM  152  H76 UNL     1      -2.790   0.852  -0.313  1.00  0.00           H  
HETATM  153  H77 UNL     1      -3.971   1.652  -1.349  1.00  0.00           H  
HETATM  154  H78 UNL     1      -1.091   1.282  -2.376  1.00  0.00           H  
HETATM  155  H79 UNL     1      -2.353   2.403  -2.865  1.00  0.00           H  
HETATM  156  H80 UNL     1      -0.446   3.418  -1.384  1.00  0.00           H  
HETATM  157  H81 UNL     1      -2.124   3.783  -1.003  1.00  0.00           H  
CONECT    1    2   77   78   79
CONECT    2    3   80   81
CONECT    3    4   82   83
CONECT    4    5   84   85
CONECT    5    6   86   87
CONECT    6    7    7   88
CONECT    7    8   89
CONECT    8    9   90   91
CONECT    9   10   10   92
CONECT   10   11   93
CONECT   11   12   94   95
CONECT   12   13   13   96
CONECT   13   14   97
CONECT   14   15   98   99
CONECT   15   16   16  100
CONECT   16   17  101
CONECT   17   18  102  103
CONECT   18   19   19  104
CONECT   19   20  105
CONECT   20   21  106  107
CONECT   21   22  108  109
CONECT   22   23   23   24
CONECT   24   25
CONECT   25   26  110  111
CONECT   26   27   76  112
CONECT   27   28  113  114
CONECT   28   29
CONECT   29   30   30   31   32
CONECT   31  115
CONECT   32   33
CONECT   33   34   34   35   36
CONECT   35  116
CONECT   36   37
CONECT   37   38  117  118
CONECT   38   39   66  119
CONECT   39   40
CONECT   40   41   49  120
CONECT   41   42   47
CONECT   42   43   43  121
CONECT   43   44  122
CONECT   44   45   46   46
CONECT   45  123  124
CONECT   46   47
CONECT   47   48   48
CONECT   49   50   68  125
CONECT   50   51   51  126
CONECT   51   52  127
CONECT   52   53   53   54
CONECT   54   55   64  128
CONECT   55   56   56  129
CONECT   56   57  130
CONECT   57   58   59  131
CONECT   58  132
CONECT   59   60  133  134
CONECT   60   61  135  136
CONECT   61   62  137  138
CONECT   62   63  139  140
CONECT   63  141  142  143
CONECT   64   65   66  144
CONECT   65  145
CONECT   66   67  146
CONECT   67  147
CONECT   68   69  148  149
CONECT   69   70   70  150
CONECT   70   71  151
CONECT   71   72  152  153
CONECT   72   73  154  155
CONECT   73   74  156  157
CONECT   74   75   75   76
END
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SMILES for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))

CCCCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCC(=O)OC[C@@H]1COP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@@H](CC=CCCCC(=O)O1)C=CC(=O)[C@H](\C=C\[C@@H](O)CCCCC)[C@H](O)[C@@H]2O)N1C=CC(N)=NC1=O
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INCHI for HMDB0292459 (CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2))

InChI=1S/C54H81N3O17P2/c1-3-5-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-27-31-49(60)69-39-44-40-70-75(65,66)74-76(67,68)71-41-47-52(63)51(62)45(35-34-43(58)30-25-6-4-2)46(59)36-33-42(29-26-23-24-28-32-50(61)72-44)53(73-47)57-38-37-48(55)56-54(57)64/h9-10,12-13,15-16,18-19,21-23,26,33-38,42-45,47,51-53,58,62-63H,3-8,11,14,17,20,24-25,27-32,39-41H2,1-2H3,(H,65,66)(H,67,68)(H2,55,56,64)/b10-9-,13-12-,16-15-,19-18-,22-21-,26-23-,35-34+,36-33?/t42-,43-,44+,45-,47+,51-,52+,53+/m0/s1
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View in JSmolView Stereo Labels
Synonyms
ValueSource
[(1R,9R,15Z,18S,22R,23S,24S,26R)-4,6,23,24-Tetrahydroxy-26-(2-hydroxy-4-imino-1,4-dihydropyrimidin-1-yl)-22-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-4,6,11,21-tetraoxo-3,5,7,10,25-pentaoxa-4,6-diphosphabicyclo[16.6.2]hexacosa-15,19-dien-9-yl]methyl (7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoic acidGenerator
Chemical FormulaC54H81N3O17P2
Average Molecular Weight1106.194
Monoisotopic Molecular Weight1105.504122156
IUPAC Name[(1R,9R,15Z,18S,22R,23S,24S,26R)-26-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-4,6,23,24-tetrahydroxy-22-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-4,6,11,21-tetraoxo-3,5,7,10,25-pentaoxa-4lambda5,6lambda5-diphosphabicyclo[16.6.2]hexacosa-15,19-dien-9-yl]methyl (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate
Traditional Name[(1R,9R,15Z,18S,22R,23S,24S,26R)-26-(4-amino-2-oxopyrimidin-1-yl)-4,6,23,24-tetrahydroxy-22-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-4,6,11,21-tetraoxo-3,5,7,10,25-pentaoxa-4lambda5,6lambda5-diphosphabicyclo[16.6.2]hexacosa-15,19-dien-9-yl]methyl (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate
CAS Registry NumberNot Available
SMILES
CCCCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCC(=O)OC[C@@H]1COP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@@H](CC=CCCCC(=O)O1)C=CC(=O)[C@H](\C=C\[C@@H](O)CCCCC)[C@H](O)[C@@H]2O)N1C=CC(N)=NC1=O
InChI Identifier
InChI=1S/C54H81N3O17P2/c1-3-5-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-27-31-49(60)69-39-44-40-70-75(65,66)74-76(67,68)71-41-47-52(63)51(62)45(35-34-43(58)30-25-6-4-2)46(59)36-33-42(29-26-23-24-28-32-50(61)72-44)53(73-47)57-38-37-48(55)56-54(57)64/h9-10,12-13,15-16,18-19,21-23,26,33-38,42-45,47,51-53,58,62-63H,3-8,11,14,17,20,24-25,27-32,39-41H2,1-2H3,(H,65,66)(H,67,68)(H2,55,56,64)/b10-9-,13-12-,16-15-,19-18-,22-21-,26-23-,35-34+,36-33?/t42-,43-,44+,45-,47+,51-,52+,53+/m0/s1
InChI KeyIITWNBUGUCCPGI-WMLGFOFDSA-N
Chemical Taxonomy
ClassificationNot classified
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP5.17ALOGPS
logP8.19ChemAxon
logS-5.1ALOGPS
pKa (Strongest Acidic)1.87ChemAxon
pKa (Strongest Basic)0.37ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count14ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area300.57 ŲChemAxon
Rotatable Bond Count25ChemAxon
Refractivity295.54 m³·mol⁻¹ChemAxon
Polarizability115.7 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+322.64932859911
AllCCS[M+H-H2O]+323.12432859911
AllCCS[M+Na]+322.03432859911
AllCCS[M+NH4]+322.17632859911
AllCCS[M-H]-301.63732859911
AllCCS[M+Na-2H]-308.15532859911
AllCCS[M+HCOO]-315.18632859911
DeepCCS[M+H]+299.40430932474
DeepCCS[M-H]-297.72230932474
DeepCCS[M-2H]-331.75430932474
DeepCCS[M+Na]+305.56130932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) 10V, Positive-QTOFsplash10-0bti-7900000004-c93ed817b811bf0378302021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) 20V, Positive-QTOFsplash10-074m-9200000008-66b3e9067234439563942021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) 40V, Positive-QTOFsplash10-0200-5900001600-4dfdeeadce3c4ba4c1622021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) 10V, Negative-QTOFsplash10-0udi-1900000000-e29e82f21ba4ab8df14c2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) 20V, Negative-QTOFsplash10-0imi-5903000512-54243527d2e82fcd32fc2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - CDP-DG(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) 40V, Negative-QTOFsplash10-00di-6293000800-7ee7b97951d714f7d4232021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Hajeyah AA, Griffiths WJ, Wang Y, Finch AJ, O'Donnell VB: The Biosynthesis of Enzymatically Oxidized Lipids. Front Endocrinol (Lausanne). 2020 Nov 19;11:591819. doi: 10.3389/fendo.2020.591819. eCollection 2020. [PubMed:33329396 ]