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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-22 16:28:19 UTC
Update Date2021-09-22 16:28:19 UTC
HMDB IDHMDB0301700
Secondary Accession NumbersNone
Metabolite Identification
Common NameQuercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside
DescriptionQuercetin 3-o-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside is a member of the class of compounds known as flavonoid-3-o-glycosides. Flavonoid-3-o-glycosides are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C3-position. Quercetin 3-o-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside is slightly soluble (in water) and a very weakly acidic compound (based on its pKa). Quercetin 3-o-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside can be found in common sage, common thyme, italian oregano, and rosemary, which makes quercetin 3-o-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside a potential biomarker for the consumption of these food products.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC33H40O20
Average Molecular Weight756.6587
Monoisotopic Molecular Weight756.21129372
IUPAC Name3-{[(2S,3R,4S,5S,6R)-6-({[(2R,3R,4R,5R,6S)-4,5-dihydroxy-6-methyl-3-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}oxan-2-yl]oxy}methyl)-3,4,5-trihydroxyoxan-2-yl]oxy}-2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one
Traditional Name3-{[(2S,3R,4S,5S,6R)-6-({[(2R,3R,4R,5R,6S)-4,5-dihydroxy-6-methyl-3-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}oxan-2-yl]oxy}methyl)-3,4,5-trihydroxyoxan-2-yl]oxy}-2-(3,4-dihydroxyphenyl)-5,7-dihydroxychromen-4-one
CAS Registry Number117-39-5
SMILES
C[C@@H]1O[C@@H](O[C@@H]2[C@H](O)[C@@H](O)[C@H](C)O[C@H]2OC[C@H]2O[C@@H](OC3=C(OC4=CC(O)=CC(O)=C4C3=O)C3=CC(O)=C(O)C=C3)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@H](O)[C@H]1O
InChI Identifier
InChI=1S/C33H40O20/c1-9-19(38)23(42)26(45)31(48-9)53-30-25(44)20(39)10(2)49-33(30)47-8-17-21(40)24(43)27(46)32(51-17)52-29-22(41)18-15(37)6-12(34)7-16(18)50-28(29)11-3-4-13(35)14(36)5-11/h3-7,9-10,17,19-21,23-27,30-40,42-46H,8H2,1-2H3/t9-,10-,17+,19-,20-,21+,23+,24-,25+,26+,27+,30+,31-,32-,33+/m0/s1
InChI KeyZKLZXRYXKRWGQP-RHZMNZKUSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as flavonoid-3-o-glycosides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C3-position.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavonoid glycosides
Direct ParentFlavonoid-3-O-glycosides
Alternative Parents
Substituents
  • Oligosaccharide
  • Flavonoid-3-o-glycoside
  • Hydroxyflavonoid
  • Flavone
  • 7-hydroxyflavonoid
  • 5-hydroxyflavonoid
  • 4'-hydroxyflavonoid
  • 3'-hydroxyflavonoid
  • Chromone
  • O-glycosyl compound
  • Glycosyl compound
  • 1-benzopyran
  • Benzopyran
  • Catechol
  • Phenol
  • 1-hydroxy-2-unsubstituted benzenoid
  • Pyranone
  • 1-hydroxy-4-unsubstituted benzenoid
  • Monocyclic benzene moiety
  • Benzenoid
  • Pyran
  • Oxane
  • Vinylogous acid
  • Heteroaromatic compound
  • Secondary alcohol
  • Organoheterocyclic compound
  • Oxacycle
  • Acetal
  • Polyol
  • Organic oxide
  • Organic oxygen compound
  • Alcohol
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.1ALOGPS
logP-1.6ChemAxon
logS-2ALOGPS
pKa (Strongest Acidic)6.43ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count20ChemAxon
Hydrogen Donor Count12ChemAxon
Polar Surface Area324.44 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity171.01 m³·mol⁻¹ChemAxon
Polarizability71.98 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+252.7532859911
AllCCS[M+H-H2O]+252.44832859911
AllCCS[M+Na]+253.04332859911
AllCCS[M+NH4]+252.98432859911
AllCCS[M-H]-249.92732859911
AllCCS[M+Na-2H]-253.75932859911
AllCCS[M+HCOO]-258.06132859911
DeepCCS[M+H]+253.24430932474
DeepCCS[M-H]-251.42930932474
DeepCCS[M-2H]-285.46230932474
DeepCCS[M+Na]+259.33930932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 10V, Positive-QTOFsplash10-0udu-0239243500-77690df76934e7ce87162016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 20V, Positive-QTOFsplash10-0udi-0239221000-f3fd081447ca593695d92016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 40V, Positive-QTOFsplash10-0udr-0739010000-4349da1dfc5ca7f6a5212016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 10V, Negative-QTOFsplash10-0pb9-3549444700-b3b8eff7ba88511a1e1a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 20V, Negative-QTOFsplash10-0udi-2849111100-ebce4699829fe1128c042016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 40V, Negative-QTOFsplash10-0udi-4938000000-ad230a74a6f3df63fac92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 10V, Positive-QTOFsplash10-0udi-0009000200-62222de614861642eb372021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 20V, Positive-QTOFsplash10-14i0-0009000900-ca932e2f60905aed61052021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 40V, Positive-QTOFsplash10-0udi-0009000000-58b2754f892c40f076992021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 10V, Negative-QTOFsplash10-0a4i-0000000900-1d5a356ed2cd4ce01e192021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 20V, Negative-QTOFsplash10-0pb9-0005000900-4ada7cba2af5e24276f82021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Quercetin 3-O-rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside 40V, Negative-QTOFsplash10-0udi-0019000100-6dd74e50300c66d9f5b72021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB000214
KNApSAcK IDNot Available
Chemspider ID8459401
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10283929
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available