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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-23 18:27:55 UTC
Update Date2021-09-23 18:27:56 UTC
HMDB IDHMDB0302528
Secondary Accession NumbersNone
Metabolite Identification
Common NameApigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside)
DescriptionApigenin 7-(6''-o-alpha-rhamnosyl-beta-glucoside) is a member of the class of compounds known as flavonoid-7-o-glycosides. Flavonoid-7-o-glycosides are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C7-position. Apigenin 7-(6''-o-alpha-rhamnosyl-beta-glucoside) is slightly soluble (in water) and a very weakly acidic compound (based on its pKa). Apigenin 7-(6''-o-alpha-rhamnosyl-beta-glucoside) can be found in lemon, which makes apigenin 7-(6''-o-alpha-rhamnosyl-beta-glucoside) a potential biomarker for the consumption of this food product.
Structure
Thumb
Synonyms
ValueSource
Apigenin 7-(6''-O-a-rhamnosyl-b-glucoside)Generator
Apigenin 7-(6''-O-α-rhamnosyl-β-glucoside)Generator
Chemical FormulaC27H30O14
Average Molecular Weight578.5187
Monoisotopic Molecular Weight578.163555668
IUPAC Name5-hydroxy-2-(4-hydroxyphenyl)-7-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}methyl)oxan-2-yl]oxy}-4H-chromen-4-one
Traditional Name5-hydroxy-2-(4-hydroxyphenyl)-7-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-({[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}methyl)oxan-2-yl]oxy}chromen-4-one
CAS Registry NumberNot Available
SMILES
C[C@@H]1O[C@H](OC[C@H]2O[C@@H](OC3=CC4=C(C(O)=C3)C(=O)C=C(O4)C3=CC=C(O)C=C3)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@H](O)[C@H]1O
InChI Identifier
InChI=1S/C27H30O14/c1-10-20(31)22(33)24(35)26(38-10)37-9-18-21(32)23(34)25(36)27(41-18)39-13-6-14(29)19-15(30)8-16(40-17(19)7-13)11-2-4-12(28)5-3-11/h2-8,10,18,20-29,31-36H,9H2,1H3/t10-,18+,20-,21+,22+,23-,24+,25+,26-,27+/m0/s1
InChI KeyFKIYLTVJPDLUDL-PYXJVEIZSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as flavonoid-7-o-glycosides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C7-position.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavonoid glycosides
Direct ParentFlavonoid-7-O-glycosides
Alternative Parents
Substituents
  • Flavonoid-7-o-glycoside
  • Hydroxyflavonoid
  • 4'-hydroxyflavonoid
  • 5-hydroxyflavonoid
  • Flavone
  • Phenolic glycoside
  • Glycosyl compound
  • O-glycosyl compound
  • Chromone
  • Disaccharide
  • Benzopyran
  • 1-benzopyran
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Pyranone
  • Monocyclic benzene moiety
  • Oxane
  • Pyran
  • Benzenoid
  • Vinylogous acid
  • Heteroaromatic compound
  • Secondary alcohol
  • Acetal
  • Oxacycle
  • Organoheterocyclic compound
  • Polyol
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Alcohol
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0ALOGPS
logP-0.29ChemAxon
logS-2.5ALOGPS
pKa (Strongest Acidic)8.31ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count14ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area225.06 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity135.93 m³·mol⁻¹ChemAxon
Polarizability55.98 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+228.62532859911
AllCCS[M+H-H2O]+227.27332859911
AllCCS[M+Na]+230.18832859911
AllCCS[M+NH4]+229.84432859911
AllCCS[M-H]-221.80132859911
AllCCS[M+Na-2H]-223.87832859911
AllCCS[M+HCOO]-226.30232859911
DeepCCS[M+H]+229.28730932474
DeepCCS[M-H]-227.21230932474
DeepCCS[M-2H]-260.98630932474
DeepCCS[M+Na]+235.31930932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 10V, Positive-QTOFsplash10-00di-0190170000-e6a011b2c517b66148ae2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 20V, Positive-QTOFsplash10-00di-0190100000-0ac27246c573953093cb2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 40V, Positive-QTOFsplash10-00di-1390000000-c60cce4351b700be4d542016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 10V, Negative-QTOFsplash10-00or-4480390000-8a21a3d04d43f8c6ecef2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 20V, Negative-QTOFsplash10-014i-2490010000-60dbb4223bc5556618ab2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 40V, Negative-QTOFsplash10-014i-2290000000-b364b0d0e8048c0d9bb52016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 10V, Positive-QTOFsplash10-00fr-0090040000-5360a5a561c2a6bbb4a82021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 20V, Positive-QTOFsplash10-00f0-0090910000-02c6a8c796e474e00fb92021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 40V, Positive-QTOFsplash10-00di-0090000000-60b322ff74af8a7655802021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 10V, Negative-QTOFsplash10-004i-0000190000-48e73583084c06ab45612021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 20V, Negative-QTOFsplash10-00pi-0050790000-9b843f6502778be0c2e72021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-(6''-O-alpha-rhamnosyl-beta-glucoside) 40V, Negative-QTOFsplash10-014i-0090010000-76c066300921436abb722021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB005020
KNApSAcK IDNot Available
Chemspider ID59696343
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available