Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-23 19:14:06 UTC
Update Date2021-09-23 19:14:06 UTC
HMDB IDHMDB0302626
Secondary Accession NumbersNone
Metabolite Identification
Common NameSitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside)
DescriptionSitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) belongs to the class of organic compounds known as stigmastanes and derivatives. These are sterol lipids with a structure based on the stigmastane skeleton, which consists of a cholestane moiety bearing an ethyl group at the carbon atom C24. Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Thumb
Synonyms
ValueSource
Sitosterol 3-O-(6'-O-palmitoyl-b-D-glucoside)Generator
Sitosterol 3-O-(6'-O-palmitoyl-β-D-glucoside)Generator
Chemical FormulaC51H90O7
Average Molecular Weight815.2561
Monoisotopic Molecular Weight814.668655234
IUPAC Name[(2R,3S,4S,5R,6R)-6-{[(2R,5S,10S,14R,15R)-14-[(2R,5R)-5-ethyl-6-methylheptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-5-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methyl hexadecanoate
Traditional Name[(2R,3S,4S,5R,6R)-6-{[(2R,5S,10S,14R,15R)-14-[(2R,5R)-5-ethyl-6-methylheptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-5-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methyl hexadecanoate
CAS Registry NumberNot Available
SMILES
CCCCCCCCCCCCCCCC(=O)OC[C@H]1O[C@@H](O[C@H]2CC[C@]3(C)C4CC[C@]5(C)[C@H](CCC5[C@@H]4CC=C3C2)[C@H](C)CC[C@@H](CC)C(C)C)[C@H](O)[C@@H](O)[C@@H]1O
InChI Identifier
InChI=1S/C51H90O7/c1-8-10-11-12-13-14-15-16-17-18-19-20-21-22-45(52)56-34-44-46(53)47(54)48(55)49(58-44)57-39-29-31-50(6)38(33-39)25-26-40-42-28-27-41(51(42,7)32-30-43(40)50)36(5)23-24-37(9-2)35(3)4/h25,35-37,39-44,46-49,53-55H,8-24,26-34H2,1-7H3/t36-,37-,39+,40+,41-,42?,43?,44-,46-,47+,48-,49-,50+,51-/m1/s1
InChI KeyJCLYMCVRBRHEHI-OEBCYWCUSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as stigmastanes and derivatives. These are sterol lipids with a structure based on the stigmastane skeleton, which consists of a cholestane moiety bearing an ethyl group at the carbon atom C24.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassStigmastanes and derivatives
Direct ParentStigmastanes and derivatives
Alternative Parents
Substituents
  • C24-propyl-sterol-skeleton
  • Stigmastane-skeleton
  • Triterpenoid
  • Steroidal glycoside
  • Saccharolipid
  • Delta-5-steroid
  • Glycosyl compound
  • O-glycosyl compound
  • Oxane
  • Monosaccharide
  • Secondary alcohol
  • Carboxylic acid ester
  • Organoheterocyclic compound
  • Polyol
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Acetal
  • Oxacycle
  • Alcohol
  • Organic oxygen compound
  • Organic oxide
  • Organooxygen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP9.46ALOGPS
logP12.99ChemAxon
logS-7ALOGPS
pKa (Strongest Acidic)12.21ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area105.45 ŲChemAxon
Rotatable Bond Count25ChemAxon
Refractivity235.77 m³·mol⁻¹ChemAxon
Polarizability103.96 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+289.22232859911
AllCCS[M+H-H2O]+289.36832859911
AllCCS[M+Na]+289.00432859911
AllCCS[M+NH4]+289.05732859911
AllCCS[M-H]-237.66232859911
AllCCS[M+Na-2H]-244.52732859911
AllCCS[M+HCOO]-252.06432859911
DeepCCS[M+H]+309.05830932474
DeepCCS[M-H]-307.33430932474
DeepCCS[M-2H]-341.5230932474
DeepCCS[M+Na]+315.38730932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 10V, Positive-QTOFsplash10-014j-1158930440-51dd86227ece31d3028c2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 20V, Positive-QTOFsplash10-014j-4358900100-7cf2dd50912c8d8daeec2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 40V, Positive-QTOFsplash10-00kk-7976300000-21cb6e584817e32618a92016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 10V, Negative-QTOFsplash10-08g0-0093310030-72a434807303fccdaff62016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 20V, Negative-QTOFsplash10-08fr-0092600000-51666f290357159c836a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 40V, Negative-QTOFsplash10-08fr-4087900000-00e317c10ed5b79b200c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 10V, Positive-QTOFsplash10-014i-9122202370-4b59af9533a7f7052a992021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 20V, Positive-QTOFsplash10-052f-9024000000-6f058da0fc716caefb2c2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 40V, Positive-QTOFsplash10-052f-9100000000-d2f387c198ab42b24cfc2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 10V, Negative-QTOFsplash10-03di-0000320090-2b0a5837f130ce6ccfa62021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 20V, Negative-QTOFsplash10-03di-5042881290-bc401d6067c41afa430f2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sitosterol 3-O-(6'-O-palmitoyl-beta-D-glucoside) 40V, Negative-QTOFsplash10-0bt9-9132500100-05267f9373fa7ff742f32021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB005452
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available