Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-23 23:55:42 UTC
Update Date2021-09-23 23:55:42 UTC
HMDB IDHMDB0303169
Secondary Accession NumbersNone
Metabolite Identification
Common NameAstringin
DescriptionAstringin is a member of the class of compounds known as stilbene glycosides. Stilbene glycosides are compounds structurally characterized by the presence of a carbohydrate moiety glycosidically linked to the stilbene skeleton. Astringin is practically insoluble (in water) and a very weakly acidic compound (based on its pKa). Astringin can be found in grape wine, which makes astringin a potential biomarker for the consumption of this food product. Astringin is a stilbenoid, the 3-beta-D-glucoside of piceatannol. It can be found in the bark of Picea sitchensis or Picea abies (Norway spruce) .
Structure
Thumb
SynonymsNot Available
Chemical FormulaC20H22O9
Average Molecular Weight406.3833
Monoisotopic Molecular Weight406.126382302
IUPAC Name2-{3-[(Z)-2-(3,4-dihydroxyphenyl)ethenyl]-5-hydroxyphenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol
Traditional Name2-{3-[(Z)-2-(3,4-dihydroxyphenyl)ethenyl]-5-hydroxyphenoxy}-6-(hydroxymethyl)oxane-3,4,5-triol
CAS Registry NumberNot Available
SMILES
OCC1OC(OC2=CC(\C=C/C3=CC=C(O)C(O)=C3)=CC(O)=C2)C(O)C(O)C1O
InChI Identifier
InChI=1S/C20H22O9/c21-9-16-17(25)18(26)19(27)20(29-16)28-13-6-11(5-12(22)8-13)2-1-10-3-4-14(23)15(24)7-10/h1-8,16-27H,9H2/b2-1-
InChI KeyPERPNFLGJXUDDW-UPHRSURJSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as stilbene glycosides. Stilbene glycosides are compounds structurally characterized by the presence of a carbohydrate moiety glycosidically linked to the stilbene skeleton.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassStilbenes
Sub ClassStilbene glycosides
Direct ParentStilbene glycosides
Alternative Parents
Substituents
  • Stilbene glycoside
  • Phenolic glycoside
  • Hexose monosaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Phenoxy compound
  • Phenol ether
  • Catechol
  • Styrene
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Oxane
  • Monosaccharide
  • Benzenoid
  • Monocyclic benzene moiety
  • Secondary alcohol
  • Acetal
  • Oxacycle
  • Organoheterocyclic compound
  • Polyol
  • Alcohol
  • Hydrocarbon derivative
  • Primary alcohol
  • Organic oxygen compound
  • Organooxygen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0.44ALOGPS
logP0.83ChemAxon
logS-2.7ALOGPS
pKa (Strongest Acidic)8.99ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count7ChemAxon
Polar Surface Area160.07 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity101.58 m³·mol⁻¹ChemAxon
Polarizability40.25 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+196.69832859911
AllCCS[M+H-H2O]+194.06132859911
AllCCS[M+Na]+199.82132859911
AllCCS[M+NH4]+199.12632859911
AllCCS[M-H]-191.99832859911
AllCCS[M+Na-2H]-192.34232859911
AllCCS[M+HCOO]-192.8732859911
DeepCCS[M+H]+193.31530932474
DeepCCS[M-H]-190.95730932474
DeepCCS[M-2H]-224.77630932474
DeepCCS[M+Na]+199.89930932474

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Astringin,4TMS,isomer #26C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13820.6Semi standard non polar33892256
Astringin,4TMS,isomer #26C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13715.7Standard non polar33892256
Astringin,4TMS,isomer #26C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C14588.3Standard polar33892256
Astringin,5TMS,isomer #18C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13817.4Semi standard non polar33892256
Astringin,5TMS,isomer #18C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13737.5Standard non polar33892256
Astringin,5TMS,isomer #18C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C14377.6Standard polar33892256
Astringin,5TMS,isomer #19C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13766.9Semi standard non polar33892256
Astringin,5TMS,isomer #19C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13664.6Standard non polar33892256
Astringin,5TMS,isomer #19C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C14261.7Standard polar33892256
Astringin,6TMS,isomer #7C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C2)=CC(OC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13789.0Semi standard non polar33892256
Astringin,6TMS,isomer #7C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C2)=CC(OC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C13694.3Standard non polar33892256
Astringin,6TMS,isomer #7C[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C2)=CC(OC2OC(CO)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C2O[Si](C)(C)C)=C14084.3Standard polar33892256
Astringin,4TBDMS,isomer #26CC(C)(C)[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C(C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)=C14800.6Semi standard non polar33892256
Astringin,4TBDMS,isomer #26CC(C)(C)[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C(C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)=C14553.6Standard non polar33892256
Astringin,4TBDMS,isomer #26CC(C)(C)[Si](C)(C)OC1=CC(/C=C\C2=CC=C(O[Si](C)(C)C(C)(C)C)C(O)=C2)=CC(OC2OC(CO)C(O)C(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)=C14730.1Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 10V, Positive-QTOFsplash10-052b-0192200000-47324738bbf1286d03e82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 20V, Positive-QTOFsplash10-0002-0290000000-c10923f618c680272a582016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 40V, Positive-QTOFsplash10-054t-2960000000-1cd4da997a84c634304c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 10V, Negative-QTOFsplash10-0a4l-2283900000-8cfa7ce7735757fa99c22016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 20V, Negative-QTOFsplash10-0006-1191000000-85c4864c95b9ef5fc1fe2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 40V, Negative-QTOFsplash10-0006-3390000000-6cf74ee3ea731f4818ab2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 10V, Positive-QTOFsplash10-052b-0494700000-6bf59c1e51c9ceb658d72021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 20V, Positive-QTOFsplash10-002b-0291000000-9584f0bca314b5c8ab0d2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 40V, Positive-QTOFsplash10-054t-6894000000-d64d43d36205a8ce5a0a2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 10V, Negative-QTOFsplash10-052f-0190700000-fc5019cdfd9c97abbefc2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 20V, Negative-QTOFsplash10-0006-0190000000-320a3f95c94425f411c22021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Astringin 40V, Negative-QTOFsplash10-0006-1490000000-90f7f261769ae44908e92021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB008433
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available