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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 01:25:55 UTC
Update Date2021-09-24 01:25:55 UTC
HMDB IDHMDB0303376
Secondary Accession NumbersNone
Metabolite Identification
Common NameCyclosquamosin C
DescriptionConstituent of the seeds of Annona squamosa (sugar apple). Cyclosquamosin C is found in fruits.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC39H65N9O11S
Average Molecular Weight868.06
Monoisotopic Molecular Weight867.452425123
IUPAC Name3-[(3S,9S,12S,15S,21S,24S,27S)-24-[(2R)-butan-2-yl]-11,14,17,23,26-pentahydroxy-21-[(1S)-1-hydroxyethyl]-12-[2-(methoxysulfanyl)ethyl]-19-methyl-15-(2-methylpropyl)-2,8,20-trioxo-1,7,10,13,16,19,22,25-octaazatricyclo[25.3.0.0³,⁷]triaconta-10,13,16,22,25-pentaen-9-yl]propanimidic acid
Traditional Name3-[(3S,9S,12S,15S,21S,24S,27S)-24-[(2R)-butan-2-yl]-11,14,17,23,26-pentahydroxy-21-[(1S)-1-hydroxyethyl]-12-[2-(methoxysulfanyl)ethyl]-19-methyl-15-(2-methylpropyl)-2,8,20-trioxo-1,7,10,13,16,19,22,25-octaazatricyclo[25.3.0.0³,⁷]triaconta-10,13,16,22,25-pentaen-9-yl]propanimidic acid
CAS Registry NumberNot Available
SMILES
[H][C@@](C)(O)[C@]1([H])N=C(O)[C@@]([H])(N=C(O)[C@]2([H])CCCN2C(=O)[C@]2([H])CCCN2C(=O)[C@]([H])(CCC(O)=N)N=C(O)[C@]([H])(CCSOC)N=C(O)[C@]([H])(CC(C)C)N=C(O)CN(C)C1=O)[C@]([H])(C)CC
InChI Identifier
InChI=1S/C39H65N9O11S/c1-8-22(4)31-36(55)45-32(23(5)49)39(58)46(6)20-30(51)41-26(19-21(2)3)34(53)42-24(15-18-60-59-7)33(52)43-25(13-14-29(40)50)37(56)48-17-10-12-28(48)38(57)47-16-9-11-27(47)35(54)44-31/h21-28,31-32,49H,8-20H2,1-7H3,(H2,40,50)(H,41,51)(H,42,53)(H,43,52)(H,44,54)(H,45,55)/t22-,23+,24+,25+,26+,27+,28+,31+,32+/m1/s1
InChI KeyFIFLPXKROTYZFP-XQJMZRAESA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentOligopeptides
Alternative Parents
Substituents
  • Alpha-oligopeptide
  • Macrolactam
  • Alpha-amino acid or derivatives
  • Fatty amide
  • Fatty acyl
  • Pyrrolidine
  • Tertiary carboxylic acid amide
  • Carboxamide group
  • Lactam
  • Primary carboxylic acid amide
  • Secondary alcohol
  • Secondary carboxylic acid amide
  • Organic thioperoxide
  • Sulfenyl compound
  • Organoheterocyclic compound
  • Azacycle
  • Carbonyl group
  • Organic oxide
  • Organic nitrogen compound
  • Organosulfur compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organopnictogen compound
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP1.05ALOGPS
logP-0.83ChemAxon
logS-3.7ALOGPS
pKa (Strongest Acidic)-0.64ChemAxon
pKa (Strongest Basic)12.57ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count17ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area297.42 ŲChemAxon
Rotatable Bond Count12ChemAxon
Refractivity232.29 m³·mol⁻¹ChemAxon
Polarizability90.09 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+284.9632859911
AllCCS[M+H-H2O]+285.332859911
AllCCS[M+Na]+284.49132859911
AllCCS[M+NH4]+284.60232859911
AllCCS[M-H]-263.26232859911
AllCCS[M+Na-2H]-268.30632859911
AllCCS[M+HCOO]-273.87732859911
DeepCCS[M+H]+269.79830932474
DeepCCS[M-H]-267.90330932474
DeepCCS[M-2H]-301.91630932474
DeepCCS[M+Na]+275.93730932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 10V, Positive-QTOFsplash10-0udi-0000000090-6e7dbdfe2de2205f6c442016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 20V, Positive-QTOFsplash10-0f89-1000000290-558db548c48de40cafb02016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 40V, Positive-QTOFsplash10-106r-6914200000-73d93c524278e1b2c4942016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 10V, Negative-QTOFsplash10-02ft-3200000190-7644861b1b912e32aa642016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 20V, Negative-QTOFsplash10-0bta-9000000150-8d5ae899bfe8aa3836202016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 40V, Negative-QTOFsplash10-03dl-9330311100-6954e786ce7076967e7a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 10V, Positive-QTOFsplash10-014i-0000000090-bd2e8e696de1f136cc6a2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 20V, Positive-QTOFsplash10-014i-0000000090-f81c160929343278ad182021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 40V, Positive-QTOFsplash10-0006-7000000790-3d32ea7f595e9c5dfbd52021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 10V, Negative-QTOFsplash10-014i-0000000090-49e857464c3bffe008922021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 20V, Negative-QTOFsplash10-03k9-3000000490-b960199f9e5946c1015d2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cyclosquamosin C 40V, Negative-QTOFsplash10-0006-6000000930-6774dd5e894d6336ce142021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012271
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound56671523
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available