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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2021-09-24 06:32:42 UTC

Update Date

2021-09-24 06:32:42 UTC

HMDB ID

HMDB0304026

Secondary Accession Numbers

None

Metabolite Identification

Common Name

16-epivellosimine

Description

16-epivellosimine is a member of the class of compounds known as macroline alkaloids. Macroline alkaloids are alkaloids with a structure that is based on the tetracyclic macroline skeleton. The macroline skeleton arises by scission of the C-21 to N-4 bond of the akuammilan skeleton, and mostly occurs in bisindole alkaloids. 16-epivellosimine is practically insoluble (in water) and an extremely weak acidic compound (based on its pKa). 16-epivellosimine can be found in a number of food items such as bitter gourd, red raspberry, orange bell pepper, and star anise, which makes 16-epivellosimine a potential biomarker for the consumption of these food products.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652303082006162D          

 25 29  0  0  0  0            999 V2000
   -0.4954   -1.0147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4623   -1.1464    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1218   -0.6615    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8164   -0.0299    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1483    0.1166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8007   -0.3830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7606   -1.7633    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7183   -1.8953    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7218   -2.0911    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4734   -1.5770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3560   -1.4150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0577   -0.7982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1391   -1.8394    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2949   -1.4049    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0942   -1.0146    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7889   -0.3830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0606   -1.1526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7218   -0.6593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4502    0.1103    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4165   -0.0277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7148    0.6607    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5669    0.6607    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2938    1.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6983    2.0911    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4930    1.4047    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  3  1  0  0  0  0
  4  3  1  0  0  0  0
 12  3  1  0  0  0  0
  2  1  1  0  0  0  0
  6  1  2  0  0  0  0
  5  6  1  0  0  0  0
  7  2  1  0  0  0  0
  2 13  1  6  0  0  0
  5  4  1  0  0  0  0
 11  8  1  0  0  0  0
  7  8  1  0  0  0  0
 12 11  1  0  0  0  0
 10 11  2  0  0  0  0
  9 10  1  0  0  0  0
 14  1  1  0  0  0  0
 15 14  1  0  0  0  0
 16  6  1  0  0  0  0
 17 15  1  0  0  0  0
 16 15  2  0  0  0  0
 18 17  2  0  0  0  0
 19 16  1  0  0  0  0
 20 18  1  0  0  0  0
 20 19  2  0  0  0  0
  8 21  1  1  0  0  0
  4 21  1  1  0  0  0
 21 22  1  6  0  0  0
 21 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
M  END

HMDB0304026
     RDKit          3D
16-epivellosimine
 42 46  0  0  0  0  0  0  0  0999 V2000
   -5.1054   -0.5208   -0.1757 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1560   -0.0662    0.8732 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8935    0.1487    0.6847 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0191    0.6007    1.7857 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6654    0.5164    1.2629 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4105   -0.8506    0.7781 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1234   -1.0809   -0.5390 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2562   -0.0466   -0.6393 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5125    1.2705   -0.9378 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9774    1.2207   -2.3043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5563    2.2380   -2.8212 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5141    1.4609    0.1529 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9120    1.4812   -0.2434 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6662    0.2322    0.0790 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0566   -0.8952    0.5683 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9725   -1.8245    0.7537 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1872   -1.3230    0.3911 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4604   -1.8435    0.3781 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5074   -1.0701   -0.0542 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3328    0.2282   -0.4830 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0734    0.7467   -0.4714 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9972   -0.0215   -0.0365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1317   -1.6233   -0.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9122   -0.0694   -1.1683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1159   -0.1732    0.1214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530    0.0975    1.8789 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1794    1.6751    2.0525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1153    0.0037    2.6925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7416   -1.5323    1.5737 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4964   -2.1013   -0.6569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3952   -0.8498   -1.3409 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9189   -0.3427   -1.4442 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3122    2.0599   -0.9326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9326    0.3186   -2.8946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7666    2.4588    0.6282 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1242    1.7549   -1.2900 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4361    2.2771    0.3651 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8702   -2.8042    1.1132 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6212   -2.8593    0.7098 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4984   -1.5048   -0.0539 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1551    0.8443   -0.8255 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8898    1.7689   -0.8020 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
  9 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
  8  3  1  0
 22 14  1  0
 12  5  1  0
 22 17  1  0
 15  6  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  2 26  1  0
  4 27  1  0
  4 28  1  0
  6 29  1  1
  7 30  1  0
  7 31  1  0
  8 32  1  6
  9 33  1  6
 10 34  1  0
 12 35  1  1
 13 36  1  0
 13 37  1  0
 16 38  1  0
 18 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  0
M  END


  Mrv1652303082006162D          

 25 29  0  0  0  0            999 V2000
   -0.4954   -1.0147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4623   -1.1464    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1218   -0.6615    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8164   -0.0299    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1483    0.1166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8007   -0.3830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7606   -1.7633    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7183   -1.8953    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7218   -2.0911    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4734   -1.5770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3560   -1.4150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0577   -0.7982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1391   -1.8394    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2949   -1.4049    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0942   -1.0146    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7889   -0.3830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0606   -1.1526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7218   -0.6593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4502    0.1103    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4165   -0.0277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7148    0.6607    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.5669    0.6607    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2938    1.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6983    2.0911    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4930    1.4047    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  3  1  0  0  0  0
  4  3  1  0  0  0  0
 12  3  1  0  0  0  0
  2  1  1  0  0  0  0
  6  1  2  0  0  0  0
  5  6  1  0  0  0  0
  7  2  1  0  0  0  0
  2 13  1  6  0  0  0
  5  4  1  0  0  0  0
 11  8  1  0  0  0  0
  7  8  1  0  0  0  0
 12 11  1  0  0  0  0
 10 11  2  0  0  0  0
  9 10  1  0  0  0  0
 14  1  1  0  0  0  0
 15 14  1  0  0  0  0
 16  6  1  0  0  0  0
 17 15  1  0  0  0  0
 16 15  2  0  0  0  0
 18 17  2  0  0  0  0
 19 16  1  0  0  0  0
 20 18  1  0  0  0  0
 20 19  2  0  0  0  0
  8 21  1  1  0  0  0
  4 21  1  1  0  0  0
 21 22  1  6  0  0  0
 21 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0304026

> <DATABASE_NAME>
hmdb

> <SMILES>
[H]C(=O)[C@]1([H])[C@@H]2CC3=C(NC4=C3C=CC=C4)[C@]3([H])C[C@H]1\C(CN23)=C/C

> <INCHI_IDENTIFIER>
InChI=1S/C19H20N2O/c1-2-11-9-21-17-8-14-12-5-3-4-6-16(12)20-19(14)18(21)7-13(11)15(17)10-22/h2-6,10,13,15,17-18,20H,7-9H2,1H3/b11-2-/t13-,15-,17-,18-/m0/s1

> <INCHI_KEY>
MHASSCPGKAMILD-MIOJWWSHSA-N

> <FORMULA>
C19H20N2O

> <MOLECULAR_WEIGHT>
292.3749

> <EXACT_MASS>
292.157563272

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
33.13974889256542

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,12S,13S,14R,15E)-15-ethylidene-3,17-diazapentacyclo[12.3.1.0^{2,10}.0^{4,9}.0^{12,17}]octadeca-2(10),4(9),5,7-tetraene-13-carbaldehyde

> <ALOGPS_LOGP>
2.51

> <JCHEM_LOGP>
2.458632152

> <ALOGPS_LOGS>
-3.45

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
17.185850226852736

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.290052809775592

> <JCHEM_PKA_STRONGEST_BASIC>
5.754158195027056

> <JCHEM_POLAR_SURFACE_AREA>
36.1

> <JCHEM_REFRACTIVITY>
88.1798

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.04e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,12S,13S,14R,15E)-15-ethylidene-3,17-diazapentacyclo[12.3.1.0^{2,10}.0^{4,9}.0^{12,17}]octadeca-2(10),4(9),5,7-tetraene-13-carbaldehyde

> <JCHEM_VEBER_RULE>
1

$$$$

HMDB0304026
     RDKit          3D
16-epivellosimine
 42 46  0  0  0  0  0  0  0  0999 V2000
   -5.1054   -0.5208   -0.1757 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1560   -0.0662    0.8732 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8935    0.1487    0.6847 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0191    0.6007    1.7857 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6654    0.5164    1.2629 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4105   -0.8506    0.7781 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1234   -1.0809   -0.5390 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2562   -0.0466   -0.6393 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5125    1.2705   -0.9378 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9774    1.2207   -2.3043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5563    2.2380   -2.8212 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5141    1.4609    0.1529 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9120    1.4812   -0.2434 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6662    0.2322    0.0790 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0566   -0.8952    0.5683 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9725   -1.8245    0.7537 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1872   -1.3230    0.3911 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4604   -1.8435    0.3781 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5074   -1.0701   -0.0542 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3328    0.2282   -0.4830 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0734    0.7467   -0.4714 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9972   -0.0215   -0.0365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1317   -1.6233   -0.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9122   -0.0694   -1.1683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1159   -0.1732    0.1214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530    0.0975    1.8789 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1794    1.6751    2.0525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1153    0.0037    2.6925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7416   -1.5323    1.5737 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4964   -2.1013   -0.6569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3952   -0.8498   -1.3409 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9189   -0.3427   -1.4442 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3122    2.0599   -0.9326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9326    0.3186   -2.8946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7666    2.4588    0.6282 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1242    1.7549   -1.2900 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4361    2.2771    0.3651 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8702   -2.8042    1.1132 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6212   -2.8593    0.7098 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4984   -1.5048   -0.0539 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1551    0.8443   -0.8255 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8898    1.7689   -0.8020 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
  9 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
  8  3  1  0
 22 14  1  0
 12  5  1  0
 22 17  1  0
 15  6  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  2 26  1  0
  4 27  1  0
  4 28  1  0
  6 29  1  1
  7 30  1  0
  7 31  1  0
  8 32  1  6
  9 33  1  6
 10 34  1  0
 12 35  1  1
 13 36  1  0
 13 37  1  0
 16 38  1  0
 18 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  0
M  END

HEADER    PROTEIN                                 08-MAR-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-MAR-20         0                                  
HETATM    1  C   UNK     0      -0.925  -1.894   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.863  -2.140   0.000  0.00  0.00           C+0
HETATM    3  N   UNK     0       2.094  -1.235   0.000  0.00  0.00           N+0
HETATM    4  C   UNK     0       1.524  -0.056   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.277   0.218   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.495  -0.715   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.420  -3.291   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.207  -3.538   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.947  -3.903   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.484  -2.944   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.398  -2.641   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.841  -1.490   0.000  0.00  0.00           C+0
HETATM   13  H   UNK     0       0.260  -3.434   0.000  0.00  0.00           H+0
HETATM   14  N   UNK     0      -2.417  -2.622   0.000  0.00  0.00           N+0
HETATM   15  C   UNK     0      -3.909  -1.894   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -3.339  -0.715   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -5.713  -2.152   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -6.947  -1.231   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -4.574   0.206   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -6.377  -0.052   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.201   1.233   0.000  0.00  0.00           C+0
HETATM   22  H   UNK     0       4.792   1.233   0.000  0.00  0.00           H+0
HETATM   23  C   UNK     0       2.415   2.613   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       3.170   3.903   0.000  0.00  0.00           O+0
HETATM   25  H   UNK     0       0.920   2.622   0.000  0.00  0.00           H+0
CONECT    1    2    6   14                                                  
CONECT    2    3    1    7   13                                             
CONECT    3    2    4   12                                                  
CONECT    4    3    5   21                                                  
CONECT    5    6    4                                                       
CONECT    6    1    5   16                                                  
CONECT    7    2    8                                                       
CONECT    8   11    7   21                                                  
CONECT    9   10                                                            
CONECT   10   11    9                                                       
CONECT   11    8   12   10                                                  
CONECT   12    3   11                                                       
CONECT   13    2                                                            
CONECT   14    1   15                                                       
CONECT   15   14   17   16                                                  
CONECT   16    6   15   19                                                  
CONECT   17   15   18                                                       
CONECT   18   17   20                                                       
CONECT   19   16   20                                                       
CONECT   20   18   19                                                       
CONECT   21    8    4   22   23                                             
CONECT   22   21                                                            
CONECT   23   21   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23                                                            
MASTER        0    0    0    0    0    0    0    0   25    0   58    0
END

COMPND    HMDB0304026
HETATM    1  C1  UNL     1      -5.105  -0.521  -0.176  1.00  0.00           C  
HETATM    2  C2  UNL     1      -4.156  -0.066   0.873  1.00  0.00           C  
HETATM    3  C3  UNL     1      -2.893   0.149   0.685  1.00  0.00           C  
HETATM    4  C4  UNL     1      -2.019   0.601   1.786  1.00  0.00           C  
HETATM    5  N1  UNL     1      -0.665   0.516   1.263  1.00  0.00           N  
HETATM    6  C5  UNL     1      -0.410  -0.851   0.778  1.00  0.00           C  
HETATM    7  C6  UNL     1      -1.123  -1.081  -0.539  1.00  0.00           C  
HETATM    8  C7  UNL     1      -2.256  -0.047  -0.639  1.00  0.00           C  
HETATM    9  C8  UNL     1      -1.512   1.271  -0.938  1.00  0.00           C  
HETATM   10  C9  UNL     1      -0.977   1.221  -2.304  1.00  0.00           C  
HETATM   11  O1  UNL     1      -0.556   2.238  -2.821  1.00  0.00           O  
HETATM   12  C10 UNL     1      -0.514   1.461   0.153  1.00  0.00           C  
HETATM   13  C11 UNL     1       0.912   1.481  -0.243  1.00  0.00           C  
HETATM   14  C12 UNL     1       1.666   0.232   0.079  1.00  0.00           C  
HETATM   15  C13 UNL     1       1.057  -0.895   0.568  1.00  0.00           C  
HETATM   16  N2  UNL     1       1.972  -1.825   0.754  1.00  0.00           N  
HETATM   17  C14 UNL     1       3.187  -1.323   0.391  1.00  0.00           C  
HETATM   18  C15 UNL     1       4.460  -1.843   0.378  1.00  0.00           C  
HETATM   19  C16 UNL     1       5.507  -1.070  -0.054  1.00  0.00           C  
HETATM   20  C17 UNL     1       5.333   0.228  -0.483  1.00  0.00           C  
HETATM   21  C18 UNL     1       4.073   0.747  -0.471  1.00  0.00           C  
HETATM   22  C19 UNL     1       2.997  -0.021  -0.037  1.00  0.00           C  
HETATM   23  H1  UNL     1      -5.132  -1.623  -0.193  1.00  0.00           H  
HETATM   24  H2  UNL     1      -4.912  -0.069  -1.168  1.00  0.00           H  
HETATM   25  H3  UNL     1      -6.116  -0.173   0.121  1.00  0.00           H  
HETATM   26  H4  UNL     1      -4.553   0.098   1.879  1.00  0.00           H  
HETATM   27  H5  UNL     1      -2.179   1.675   2.053  1.00  0.00           H  
HETATM   28  H6  UNL     1      -2.115   0.004   2.693  1.00  0.00           H  
HETATM   29  H7  UNL     1      -0.742  -1.532   1.574  1.00  0.00           H  
HETATM   30  H8  UNL     1      -1.496  -2.101  -0.657  1.00  0.00           H  
HETATM   31  H9  UNL     1      -0.395  -0.850  -1.341  1.00  0.00           H  
HETATM   32  H10 UNL     1      -2.919  -0.343  -1.444  1.00  0.00           H  
HETATM   33  H11 UNL     1      -2.312   2.060  -0.933  1.00  0.00           H  
HETATM   34  H12 UNL     1      -0.933   0.319  -2.895  1.00  0.00           H  
HETATM   35  H13 UNL     1      -0.767   2.459   0.628  1.00  0.00           H  
HETATM   36  H14 UNL     1       1.124   1.755  -1.290  1.00  0.00           H  
HETATM   37  H15 UNL     1       1.436   2.277   0.365  1.00  0.00           H  
HETATM   38  H16 UNL     1       1.870  -2.804   1.113  1.00  0.00           H  
HETATM   39  H17 UNL     1       4.621  -2.859   0.710  1.00  0.00           H  
HETATM   40  H18 UNL     1       6.498  -1.505  -0.054  1.00  0.00           H  
HETATM   41  H19 UNL     1       6.155   0.844  -0.826  1.00  0.00           H  
HETATM   42  H20 UNL     1       3.890   1.769  -0.802  1.00  0.00           H  
CONECT    1    2   23   24   25
CONECT    2    3    3   26
CONECT    3    4    8
CONECT    4    5   27   28
CONECT    5    6   12
CONECT    6    7   15   29
CONECT    7    8   30   31
CONECT    8    9   32
CONECT    9   10   12   33
CONECT   10   11   11   34
CONECT   12   13   35
CONECT   13   14   36   37
CONECT   14   15   15   22
CONECT   15   16
CONECT   16   17   38
CONECT   17   18   18   22
CONECT   18   19   39
CONECT   19   20   20   40
CONECT   20   21   41
CONECT   21   22   22   42
END

HMDB0304026
     RDKit          3D
16-epivellosimine
 42 46  0  0  0  0  0  0  0  0999 V2000
   -5.1054   -0.5208   -0.1757 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1560   -0.0662    0.8732 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8935    0.1487    0.6847 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0191    0.6007    1.7857 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6654    0.5164    1.2629 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4105   -0.8506    0.7781 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1234   -1.0809   -0.5390 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2562   -0.0466   -0.6393 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5125    1.2705   -0.9378 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9774    1.2207   -2.3043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5563    2.2380   -2.8212 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5141    1.4609    0.1529 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9120    1.4812   -0.2434 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6662    0.2322    0.0790 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0566   -0.8952    0.5683 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9725   -1.8245    0.7537 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1872   -1.3230    0.3911 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4604   -1.8435    0.3781 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5074   -1.0701   -0.0542 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3328    0.2282   -0.4830 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0734    0.7467   -0.4714 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9972   -0.0215   -0.0365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1317   -1.6233   -0.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9122   -0.0694   -1.1683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1159   -0.1732    0.1214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5530    0.0975    1.8789 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1794    1.6751    2.0525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1153    0.0037    2.6925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7416   -1.5323    1.5737 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4964   -2.1013   -0.6569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3952   -0.8498   -1.3409 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9189   -0.3427   -1.4442 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3122    2.0599   -0.9326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9326    0.3186   -2.8946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7666    2.4588    0.6282 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1242    1.7549   -1.2900 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4361    2.2771    0.3651 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8702   -2.8042    1.1132 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6212   -2.8593    0.7098 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4984   -1.5048   -0.0539 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1551    0.8443   -0.8255 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8898    1.7689   -0.8020 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
  9 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
  8  3  1  0
 22 14  1  0
 12  5  1  0
 22 17  1  0
 15  6  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  2 26  1  0
  4 27  1  0
  4 28  1  0
  6 29  1  1
  7 30  1  0
  7 31  1  0
  8 32  1  6
  9 33  1  6
 10 34  1  0
 12 35  1  1
 13 36  1  0
 13 37  1  0
 16 38  1  0
 18 39  1  0
 19 40  1  0
 20 41  1  0
 21 42  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
16-Epi-vellosimine	MeSH

Chemical Formula

C₁₉H₂₀N₂O

Average Molecular Weight

292.3749

Monoisotopic Molecular Weight

292.157563272

IUPAC Name

(1S,12S,13S,14R,15E)-15-ethylidene-3,17-diazapentacyclo[12.3.1.0^{2,10}.0^{4,9}.0^{12,17}]octadeca-2(10),4(9),5,7-tetraene-13-carbaldehyde

Traditional Name

(1S,12S,13S,14R,15E)-15-ethylidene-3,17-diazapentacyclo[12.3.1.0^{2,10}.0^{4,9}.0^{12,17}]octadeca-2(10),4(9),5,7-tetraene-13-carbaldehyde

CAS Registry Number

Not Available

SMILES

[H]C(=O)[C@]1([H])[C@@H]2CC3=C(NC4=C3C=CC=C4)[C@]3([H])C[C@H]1\C(CN23)=C/C

InChI Identifier

InChI=1S/C19H20N2O/c1-2-11-9-21-17-8-14-12-5-3-4-6-16(12)20-19(14)18(21)7-13(11)15(17)10-22/h2-6,10,13,15,17-18,20H,7-9H2,1H3/b11-2-/t13-,15-,17-,18-/m0/s1

InChI Key

MHASSCPGKAMILD-MIOJWWSHSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as macroline alkaloids. These are alkaloids with a structure that is based on the tetracyclic macroline skeleton. The macroline skeleton arises by scission of the C-21 to N-4 bond of the akuammilan skeleton, and mostly occurs in bisindole alkaloids.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Macroline alkaloids

Sub Class

Not Available

Direct Parent

Macroline alkaloids

Alternative Parents

Substituents

Macroline skeleton
Sarpagine-skeleton
Vobasan skeleton
Beta-carboline
Pyridoindole
3-alkylindole
Indole
Indole or derivatives
Quinuclidine
Aralkylamine
Benzenoid
Piperidine
Heteroaromatic compound
Pyrrole
Tertiary aliphatic amine
Tertiary amine
Organoheterocyclic compound
Azacycle
Organic nitrogen compound
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Organic oxide
Organopnictogen compound
Carbonyl group
Organic oxygen compound
Amine
Aldehyde
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

organic heteropentacyclic compound (CHEBI:16425 )
indole alkaloid (CHEBI:16425 )
aldehyde (CHEBI:16425 )

Ontology

Not Available

Herbs and Spices (FooDB: FOOD00866)

Nut

Almond (FooDB: FOOD00148)
Brazil nut (FooDB: FOOD00024)
Cashew nut (FooDB: FOOD00011)
Chestnut (FooDB: FOOD00045)
Peanut (FooDB: FOOD00016)
Hazelnut (FooDB: FOOD00376)
Pecan nut (FooDB: FOOD00044)
Pine nut (FooDB: FOOD00138)
Pistachio (FooDB: FOOD00140)
Walnut (FooDB: FOOD00608)
Acorn (FooDB: FOOD00282)
Beech nut (FooDB: FOOD00299)
Butternut (FooDB: FOOD00316)
Chinese chestnut (FooDB: FOOD00331)
European chestnut (FooDB: FOOD00363)
Hickory nut (FooDB: FOOD00377)
Macadamia nut (FooDB: FOOD00525)
Mixed nuts (FooDB: FOOD00771)
Pili nut (FooDB: FOOD00432)
Colorado pinyon (FooDB: FOOD00433)
Black walnut (FooDB: FOOD00093)
Common walnut (FooDB: FOOD00094)
Japanese chestnut (FooDB: FOOD00385)
Common hazelnut (FooDB: FOOD00062)
Macadamia nut (M. tetraphylla) (FooDB: FOOD00225)
Japanese walnut (FooDB: FOOD00240)
Nuts (FooDB: FOOD00869)

Fruit

Pome

Drupe

Apricot (FooDB: FOOD00144)
Prunus (Cherry, Plum) (FooDB: FOOD00143)
Nectarine (FooDB: FOOD00229)
Peach (FooDB: FOOD00149)
European plum (FooDB: FOOD00147)
Sour cherry (FooDB: FOOD00146)
Sweet cherry (FooDB: FOOD00145)
Common chokecherry (FooDB: FOOD00562)
Peach (var.) (FooDB: FOOD00230)

Tropical fruit

Berry

Bilberry (FooDB: FOOD00193)
Rubus (Blackberry, Raspberry) (FooDB: FOOD00160)
Vaccinium (Blueberry, Cranberry, Huckleberry) (FooDB: FOOD00188)
Blackcurrant (FooDB: FOOD00155)
Redcurrant (FooDB: FOOD00156)
Elderberry (FooDB: FOOD00358)
Gooseberry (FooDB: FOOD00157)
Grape (FooDB: FOOD00369)
Lingonberry (FooDB: FOOD00194)
Loganberry (FooDB: FOOD00400)
Strawberry (FooDB: FOOD00083)
Boysenberry (FooDB: FOOD00542)
American cranberry (FooDB: FOOD00192)
Common grape (FooDB: FOOD00204)
Strawberry guava (FooDB: FOOD00482)
Black mulberry (FooDB: FOOD00117)
Red raspberry (FooDB: FOOD00162)
Muscadine grape (FooDB: FOOD00203)
Salmonberry (FooDB: FOOD00456)
Alaska blueberry (FooDB: FOOD00380)
Sea-buckthornberry (FooDB: FOOD00087)
Black elderberry (FooDB: FOOD00166)
Black crowberry (FooDB: FOOD00075)
Black huckleberry (FooDB: FOOD00084)
Mulberry (FooDB: FOOD00116)
Black chokeberry (FooDB: FOOD00136)
Cloudberry (FooDB: FOOD00161)
Black raspberry (FooDB: FOOD00163)
Rowanberry (FooDB: FOOD00176)
Lowbush blueberry (FooDB: FOOD00189)
Sparkleberry (FooDB: FOOD00190)
Highbush blueberry (FooDB: FOOD00191)
Arctic blackberry (FooDB: FOOD00207)
Bayberry (FooDB: FOOD00209)
Elliott's blueberry (FooDB: FOOD00210)
Canada blueberry (FooDB: FOOD00211)
Bog bilberry (FooDB: FOOD00212)
Buffalo currant (FooDB: FOOD00213)
European cranberry (FooDB: FOOD00217)
Deerberry (FooDB: FOOD00218)
Cascade huckleberry (FooDB: FOOD00220)
Oval-leaf huckleberry (FooDB: FOOD00221)
Evergreen huckleberry (FooDB: FOOD00222)
Red huckleberry (FooDB: FOOD00223)
Summer grape (FooDB: FOOD00227)
Fox grape (FooDB: FOOD00228)
Half-highbush blueberry (FooDB: FOOD00248)
Jostaberry (FooDB: FOOD00257)
Sweet rowanberry (FooDB: FOOD00265)
Skunk currant (FooDB: FOOD00267)
Squashberry (FooDB: FOOD00344)
Ohelo berry (FooDB: FOOD00419)
Chinese bayberry (FooDB: FOOD00852)
Saskatoon berry (FooDB: FOOD00884)
Nanking cherry (FooDB: FOOD00885)

Other fruit

Date (FooDB: FOOD00135)
Fig (FooDB: FOOD00081)
Jujube (FooDB: FOOD00388)

Citrus

Grapefruit (FooDB: FOOD00256)
Lemon (FooDB: FOOD00054)
Lime (FooDB: FOOD00053)
Sweet orange (FooDB: FOOD00057)
Mandarin orange (Clementine, Tangerine) (FooDB: FOOD00056)
Persian lime (FooDB: FOOD00543)
Pummelo (FooDB: FOOD00055)
Grapefruit/Pummelo hybrid (FooDB: FOOD00255)
Citrus (FooDB: FOOD00859)

Fruits (FooDB: FOOD00871)

Vegetable

Shoot vegetable

Fruit vegetable

Eggplant (FooDB: FOOD00174)
Avocado (FooDB: FOOD00130)
Groundcherry (FooDB: FOOD00371)
Olive (FooDB: FOOD00121)
Pepper (FooDB: FOOD00040)
Garden tomato (FooDB: FOOD00171)
Mexican groundcherry (FooDB: FOOD00491)
Green bell pepper (FooDB: FOOD00877)
Yellow bell pepper (FooDB: FOOD00878)
Red bell pepper (FooDB: FOOD00880)
Italian sweet red pepper (FooDB: FOOD00881)
Garden tomato (var.) (FooDB: FOOD00173)
Cherry tomato (FooDB: FOOD00172)
Pepper (C. baccatum) (FooDB: FOOD00231)
Pepper (C. chinense) (FooDB: FOOD00232)
Pepper (Capsicum) (FooDB: FOOD00233)
Pepper (C. frutescens) (FooDB: FOOD00428)
Pepper (C. pubescens) (FooDB: FOOD00849)
Orange bell pepper (FooDB: FOOD00879)

Root vegetable

Cabbage

Leaf vegetable

Lettuce (FooDB: FOOD00095)
Swiss chard (FooDB: FOOD00237)
Garden cress (FooDB: FOOD00099)
Endive (FooDB: FOOD00048)
Spinach (FooDB: FOOD00178)
Common beet (FooDB: FOOD00025)
Garland chrysanthemum (FooDB: FOOD00333)
Jute (FooDB: FOOD00389)
Lambsquarters (FooDB: FOOD00394)
New Zealand spinach (FooDB: FOOD00415)
Swamp cabbage (FooDB: FOOD00091)
Rocket salad (ssp.) (FooDB: FOOD00077)
Yautia (FooDB: FOOD00510)
Romaine lettuce (FooDB: FOOD00888)
Rocket salad (FooDB: FOOD00244)
Chicory leaves (FooDB: FOOD00250)
Corn salad (FooDB: FOOD00340)
Malabar spinach (FooDB: FOOD00404)
Ostrich fern (FooDB: FOOD00556)
Green vegetables (FooDB: FOOD00872)

Mushroom

Tuber

Onion-family vegetable

Leek (FooDB: FOOD00007)
Allium (FooDB: FOOD00005)
Wild leek (FooDB: FOOD00396)
Shallot (FooDB: FOOD00243)
Garden onion (FooDB: FOOD00006)
Garden onion (var.) (FooDB: FOOD00226)
Onion-family vegetables (FooDB: FOOD00855)
Green onion (FooDB: FOOD00963)
Red onion (FooDB: FOOD00962)

Other vegetable

Okra (FooDB: FOOD00420)
Horseradish tree (FooDB: FOOD00379)
Sacred lotus (FooDB: FOOD00402)
Tree fern (FooDB: FOOD00797)
Chinese water chestnut (FooDB: FOOD00332)
Nopal (FooDB: FOOD00416)
Carob (FooDB: FOOD00321)
Agave (FooDB: FOOD00563)
Narrowleaf cattail (FooDB: FOOD00564)
Giant butterbur (FooDB: FOOD00314)
Sesbania flower (FooDB: FOOD00469)

Stalk vegetable

Brassica

Brassicas (FooDB: FOOD00857)

Soy

Soy bean (FooDB: FOOD00085)

Soy product

Other soy product (FooDB: FOOD00271)

Cereal and cereal product

Other bread

Other bread (FooDB: FOOD00269)

Cereal

Cereal product

Dough

Sourdough (FooDB: FOOD00275)

Cereals and cereal products (FooDB: FOOD00858)

Pulse

Bean

Lentil

Lentils (FooDB: FOOD00098)

Pea

Other pulse

White lupine (FooDB: FOOD00403)
Lupine (FooDB: FOOD00104)

Pulses (FooDB: FOOD00867)

Abalone (FooDB: FOOD00279)
Conch (FooDB: FOOD00611)

Gourd

Chayote (FooDB: FOOD00325)
Cucumber (FooDB: FOOD00065)
Muskmelon (FooDB: FOOD00064)
Cucurbita (FooDB: FOOD00066)
Watermelon (FooDB: FOOD00052)
Bitter gourd (FooDB: FOOD00115)
Calabash (FooDB: FOOD00318)
Towel gourd (FooDB: FOOD00492)
Winter squash (FooDB: FOOD00283)
Butternut squash (FooDB: FOOD00317)
Wax gourd (FooDB: FOOD00499)
Green zucchini (FooDB: FOOD00875)
Yellow zucchini (FooDB: FOOD00876)
Japanese pumpkin (FooDB: FOOD00886)
Sunburst squash (pattypan squash) (FooDB: FOOD00874)
Tinda (FooDB: FOOD00559)
Horned melon (FooDB: FOOD00761)

Tea

Herbal tea

Greenthread tea (FooDB: FOOD00820)

Cocoa and cocoa product

Cocoa

Cocoa bean (FooDB: FOOD00182)

Process

Naturally occurring process

Biological process

Biochemical pathway

Metabolic pathway

Indole Alkaloid Biosynthesis (PathBank: SMP0063467)

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	2.51	ALOGPS
logP	2.46	ChemAxon
logS	-3.4	ALOGPS
pKa (Strongest Acidic)	15.29	ChemAxon
pKa (Strongest Basic)	5.75	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	36.1 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	88.18 m³·mol⁻¹	ChemAxon
Polarizability	33.14 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	172.789	32859911
AllCCS	[M+H-H2O]+	169.387	32859911
AllCCS	[M+Na]+	176.85	32859911
AllCCS	[M+NH4]+	175.943	32859911
AllCCS	[M-H]-	181.295	32859911
AllCCS	[M+Na-2H]-	180.657	32859911
AllCCS	[M+HCOO]-	180.098	32859911
DeepCCS	[M-2H]-	211.413	30932474
DeepCCS	[M+Na]+	186.627	30932474

Predicted Kovats Retention Indices

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
16-epivellosimine,1TMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([NH]C5=CC=CC=C45)[C@@H]2C[C@@H]1C3=CO[Si](C)(C)C	2961.2	Semi standard non polar	33892256
16-epivellosimine,1TMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([NH]C5=CC=CC=C45)[C@@H]2C[C@@H]1C3=CO[Si](C)(C)C	2739.5	Standard non polar	33892256
16-epivellosimine,1TMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([NH]C5=CC=CC=C45)[C@@H]2C[C@@H]1C3=CO[Si](C)(C)C	3604.9	Standard polar	33892256
16-epivellosimine,1TMS,isomer #2	C/C=C1/CN2[C@H]3C[C@@H]1[C@H](C=O)[C@@H]2CC1=C3N([Si](C)(C)C)C2=CC=CC=C12	2716.5	Semi standard non polar	33892256
16-epivellosimine,1TMS,isomer #2	C/C=C1/CN2[C@H]3C[C@@H]1[C@H](C=O)[C@@H]2CC1=C3N([Si](C)(C)C)C2=CC=CC=C12	2705.1	Standard non polar	33892256
16-epivellosimine,1TMS,isomer #2	C/C=C1/CN2[C@H]3C[C@@H]1[C@H](C=O)[C@@H]2CC1=C3N([Si](C)(C)C)C2=CC=CC=C12	3415.1	Standard polar	33892256
16-epivellosimine,2TMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([C@@H]2C[C@@H]1C3=CO[Si](C)(C)C)N([Si](C)(C)C)C1=CC=CC=C41	2794.2	Semi standard non polar	33892256
16-epivellosimine,2TMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([C@@H]2C[C@@H]1C3=CO[Si](C)(C)C)N([Si](C)(C)C)C1=CC=CC=C41	2693.3	Standard non polar	33892256
16-epivellosimine,2TMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([C@@H]2C[C@@H]1C3=CO[Si](C)(C)C)N([Si](C)(C)C)C1=CC=CC=C41	3362.0	Standard polar	33892256
16-epivellosimine,1TBDMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([NH]C5=CC=CC=C45)[C@@H]2C[C@@H]1C3=CO[Si](C)(C)C(C)(C)C	3171.5	Semi standard non polar	33892256
16-epivellosimine,1TBDMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([NH]C5=CC=CC=C45)[C@@H]2C[C@@H]1C3=CO[Si](C)(C)C(C)(C)C	2973.2	Standard non polar	33892256
16-epivellosimine,1TBDMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([NH]C5=CC=CC=C45)[C@@H]2C[C@@H]1C3=CO[Si](C)(C)C(C)(C)C	3733.6	Standard polar	33892256
16-epivellosimine,1TBDMS,isomer #2	C/C=C1/CN2[C@H]3C[C@@H]1[C@H](C=O)[C@@H]2CC1=C3N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12	2901.4	Semi standard non polar	33892256
16-epivellosimine,1TBDMS,isomer #2	C/C=C1/CN2[C@H]3C[C@@H]1[C@H](C=O)[C@@H]2CC1=C3N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12	2970.6	Standard non polar	33892256
16-epivellosimine,1TBDMS,isomer #2	C/C=C1/CN2[C@H]3C[C@@H]1[C@H](C=O)[C@@H]2CC1=C3N([Si](C)(C)C(C)(C)C)C2=CC=CC=C12	3500.8	Standard polar	33892256
16-epivellosimine,2TBDMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([C@@H]2C[C@@H]1C3=CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C1=CC=CC=C41	3141.4	Semi standard non polar	33892256
16-epivellosimine,2TBDMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([C@@H]2C[C@@H]1C3=CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C1=CC=CC=C41	3147.4	Standard non polar	33892256
16-epivellosimine,2TBDMS,isomer #1	C/C=C1/CN2[C@H]3CC4=C([C@@H]2C[C@@H]1C3=CO[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C1=CC=CC=C41	3498.6	Standard polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 16-epivellosimine GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2022-08-08	Wishart Lab	View Spectrum
MS	Mass Spectrum (Electron Ionization)	Not Available	2022-08-06	Not Available	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 10V, Positive-QTOF	splash10-0006-0090000000-502966b71b3fa4b51088	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 20V, Positive-QTOF	splash10-0006-0090000000-4071f18f2e91b42c21ef	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 40V, Positive-QTOF	splash10-0059-2980000000-df284da1af082841e13d	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 10V, Negative-QTOF	splash10-0006-0090000000-eb9636b759144711f704	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 20V, Negative-QTOF	splash10-01ox-0090000000-566d1bb0322a9b8a7e90	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 40V, Negative-QTOF	splash10-03di-0090000000-6466f92d5f8fff4b027f	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 10V, Positive-QTOF	splash10-0006-0090000000-30850ca9637e3e228dfd	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 20V, Positive-QTOF	splash10-0006-0090000000-d3385634a3967ef0b42c	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 40V, Positive-QTOF	splash10-072a-0190000000-27d6f13478b5896b1cf5	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 10V, Negative-QTOF	splash10-0006-0090000000-74a3146908205cd6ebec	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 20V, Negative-QTOF	splash10-03di-0090000000-972804a8372b111e10d0	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 16-epivellosimine 40V, Negative-QTOF	splash10-00dr-0090000000-59d95f3c81fe9761c0cc	2021-10-21	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

KNApSAcK ID

Chemspider ID

KEGG Compound ID

BioCyc ID

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

16425

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for 16-epivellosimine (HMDB0304026)

MOL for HMDB0304026 (16-epivellosimine)

3D MOL for HMDB0304026 (16-epivellosimine)

3D SDF for HMDB0304026 (16-epivellosimine)

3D-SDF for HMDB0304026 (16-epivellosimine)

PDB for HMDB0304026 (16-epivellosimine)

3D PDB for HMDB0304026 (16-epivellosimine)

SMILES for HMDB0304026 (16-epivellosimine)

INCHI for HMDB0304026 (16-epivellosimine)

Structure for HMDB0304026 (16-epivellosimine)

3D Structure for HMDB0304026 (16-epivellosimine)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Derivatized

GC-MS Spectra

MS/MS Spectra