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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 07:24:48 UTC
Update Date2021-09-24 07:24:48 UTC
HMDB IDHMDB0304128
Secondary Accession NumbersNone
Metabolite Identification
Common Name3-epi-6-deoxocathasterone
Description3-epi-6-deoxocathasterone belongs to dihydroxy bile acids, alcohols and derivatives class of compounds. Those are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups. 3-epi-6-deoxocathasterone is practically insoluble (in water) and an extremely weak acidic compound (based on its pKa). 3-epi-6-deoxocathasterone can be found in a number of food items such as butternut, mung bean, sunflower, and japanese persimmon, which makes 3-epi-6-deoxocathasterone a potential biomarker for the consumption of these food products.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC28H50O2
Average Molecular Weight418.706
Monoisotopic Molecular Weight418.38108085
IUPAC Name14-(3-hydroxy-5,6-dimethylheptan-2-yl)-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-5-ol
Traditional Name14-(3-hydroxy-5,6-dimethylheptan-2-yl)-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-5-ol
CAS Registry NumberNot Available
SMILES
CC(C)C(C)CC(O)C(C)C1CCC2C3CCC4CC(O)CCC4(C)C3CCC12C
InChI Identifier
InChI=1S/C28H50O2/c1-17(2)18(3)15-26(30)19(4)23-9-10-24-22-8-7-20-16-21(29)11-13-27(20,5)25(22)12-14-28(23,24)6/h17-26,29-30H,7-16H2,1-6H3
InChI KeyZHZKWZJLUNXOSN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. Dihydroxy bile acids, alcohols and derivatives are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassBile acids, alcohols and derivatives
Direct ParentDihydroxy bile acids, alcohols and derivatives
Alternative Parents
Substituents
  • Ergostane-skeleton
  • Ergosterol-skeleton
  • Dihydroxy bile acid, alcohol, or derivatives
  • 22-hydroxysteroid
  • Hydroxysteroid
  • 3-hydroxysteroid
  • Cyclic alcohol
  • Secondary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP5.7ALOGPS
logP6.5ChemAxon
logS-6.7ALOGPS
pKa (Strongest Acidic)18.3ChemAxon
pKa (Strongest Basic)-0.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity125.91 m³·mol⁻¹ChemAxon
Polarizability53.4 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+209.53932859911
AllCCS[M+H-H2O]+207.62132859911
AllCCS[M+Na]+211.80132859911
AllCCS[M+NH4]+211.29932859911
AllCCS[M-H]-204.92132859911
AllCCS[M+Na-2H]-207.17132859911
AllCCS[M+HCOO]-209.80232859911
DeepCCS[M-2H]-237.79530932474
DeepCCS[M+Na]+213.14730932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 10V, Positive-QTOFsplash10-0uxr-0014900000-bdaa9b1b59ab1c7592622015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 20V, Positive-QTOFsplash10-0gc9-2129400000-0820f4b1d7bab3839b1f2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 40V, Positive-QTOFsplash10-000i-8497100000-f703a235f61deafb6a8e2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 10V, Positive-QTOFsplash10-0uxr-0014900000-bdaa9b1b59ab1c7592622015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 20V, Positive-QTOFsplash10-0gc9-2129400000-0820f4b1d7bab3839b1f2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 40V, Positive-QTOFsplash10-000i-8497100000-f703a235f61deafb6a8e2015-05-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 10V, Negative-QTOFsplash10-014i-0003900000-77331cd5689533a9c73b2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 20V, Negative-QTOFsplash10-014j-2119700000-361ec862d6c9bbe5b6c52015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 40V, Negative-QTOFsplash10-0udr-7159300000-e5eee3903b76f0ab7c5f2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 10V, Negative-QTOFsplash10-014i-0003900000-77331cd5689533a9c73b2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 20V, Negative-QTOFsplash10-014j-2119700000-361ec862d6c9bbe5b6c52015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 40V, Negative-QTOFsplash10-0udr-7159300000-e5eee3903b76f0ab7c5f2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 10V, Positive-QTOFsplash10-0gb9-3125900000-10aad6b35b3db3ec94042021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 20V, Positive-QTOFsplash10-00ng-9223100000-f299954d72cde85b56ca2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 40V, Positive-QTOFsplash10-052g-7910000000-502ea41ac26583094ddc2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 10V, Negative-QTOFsplash10-014i-0000900000-0eedc4d821acee4f9d082021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 20V, Negative-QTOFsplash10-014i-0001900000-ab7f11284ac2e8688db42021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-epi-6-deoxocathasterone 40V, Negative-QTOFsplash10-0gb9-1016900000-d2b841be2372bbbf289b2021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB030424
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound73229502
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available