Jump To Section:

Identification Taxonomy Ontology Physical properties Spectra Biological properties Concentrations Links References XML

Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2021-09-24 07:33:17 UTC

Update Date

2021-09-24 07:33:18 UTC

HMDB ID

HMDB0304145

Secondary Accession Numbers

None

Metabolite Identification

Common Name

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate

Description

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate is practically insoluble (in water) and a weakly acidic compound (based on its pKa). 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate can be found in a number of food items such as lemon grass, fireweed, pepper (c. pubescens), and pili nut, which makes 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate a potential biomarker for the consumption of these food products.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0304145
     RDKit          3D
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate
 50 50  0  0  0  0  0  0  0  0999 V2000
    6.6648    2.5248    0.3886 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4222    1.0470    0.2373 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9426    0.7572    0.1688 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4381    0.1811   -0.8727 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0678   -0.1908   -1.1464 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1139    0.0418   -0.0510 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4229   -0.7683    1.1444 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7561   -0.4351    2.2339 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2074   -2.1903    0.6608 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9253   -2.0438   -0.1424 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7313   -0.5590   -0.3814 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2074   -0.0209    0.6583 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6177   -0.4968    0.5037 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1488   -0.0624   -0.8318 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5597   -0.5494   -0.9942 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4333    0.0256    0.0849 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8707   -0.4277   -0.0639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7142    0.1558    1.0187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7513    1.6239    0.9689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1984    2.2801    0.0728 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4529    2.3008    1.9965 O   0  0  0  0  0  1  0  0  0  0  0  0
    5.9251    3.0811   -0.1924 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6944    2.7265    0.0082 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6926    2.8348    1.4721 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8966    0.7398   -0.7199 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8995    0.5286    1.0869 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3196    1.0694    0.9904 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1637   -0.0704   -1.6877 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7089    0.4408   -2.0326 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9901   -1.2417   -1.5763 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0100    1.1088    0.1509 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0047   -2.5098   -0.0225 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0932   -2.8858    1.5167 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1012   -2.4994    0.4211 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0011   -2.6000   -1.1015 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4590   -0.3901   -1.4116 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2254    1.0905    0.5366 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1649   -0.3002    1.6699 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7152   -1.6018    0.5494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2076   -0.0002    1.3101 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1423    1.0511   -0.8890 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5225   -0.4129   -1.6794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5080   -1.6726   -0.9184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9436   -0.2976   -1.9996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1308   -0.3678    1.1030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2864    1.0946    0.1266 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2324   -0.1015   -1.0779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9190   -1.5423   -0.0028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7397   -0.2784    0.9710 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2898   -0.1871    2.0035 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 11  6  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  2 25  1  0
  2 26  1  0
  3 27  1  0
  4 28  1  0
  5 29  1  0
  5 30  1  0
  6 31  1  0
  9 32  1  0
  9 33  1  0
 10 34  1  0
 10 35  1  0
 11 36  1  0
 12 37  1  0
 12 38  1  0
 13 39  1  0
 13 40  1  0
 14 41  1  0
 14 42  1  0
 15 43  1  0
 15 44  1  0
 16 45  1  0
 16 46  1  0
 17 47  1  0
 17 48  1  0
 18 49  1  0
 18 50  1  0
M  CHG  1  21  -1
M  END


  Mrv1533005141512322D          

 21 21  0  0  0  0            999 V2000
   -0.5426    5.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7141    4.5055    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1011    3.9535    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2726    3.1465    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3405    2.5945    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1251    2.8494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3801    3.6340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8952    4.3015    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2051    3.6340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4600    2.8494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7926    2.3645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7926    1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5070    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2215    1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9360    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6505    1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3649    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0794    1.5395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7939    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5083    1.5395    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    6.7939    0.3020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  4  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  2  0  0  0  0
  6 11  1  0  0  0  0
M  CHG  1  20  -1
M  END
> <DATABASE_ID>
HMDB0304145

> <DATABASE_NAME>
hmdb

> <SMILES>
CCC=CCC1C(CCCCCCCC([O-])=O)CCC1=O

> <INCHI_IDENTIFIER>
InChI=1S/C18H30O3/c1-2-3-7-11-16-15(13-14-17(16)19)10-8-5-4-6-9-12-18(20)21/h3,7,15-16H,2,4-6,8-14H2,1H3,(H,20,21)/p-1

> <INCHI_KEY>
BZXZFDKIRZBJEP-UHFFFAOYSA-M

> <FORMULA>
C18H29O3

> <MOLECULAR_WEIGHT>
293.428

> <EXACT_MASS>
293.212218374

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
50

> <JCHEM_AVERAGE_POLARIZABILITY>
35.29685489920164

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
-1

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
8-[3-oxo-2-(pent-2-en-1-yl)cyclopentyl]octanoate

> <ALOGPS_LOGP>
5.48

> <JCHEM_LOGP>
5.081722867666667

> <ALOGPS_LOGS>
-5.56

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.7217866991076605

> <JCHEM_PKA_STRONGEST_BASIC>
-7.422117548650318

> <JCHEM_POLAR_SURFACE_AREA>
57.199999999999996

> <JCHEM_REFRACTIVITY>
96.9996

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.67e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
8-[3-oxo-2-(pent-2-en-1-yl)cyclopentyl]octanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0304145
     RDKit          3D
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate
 50 50  0  0  0  0  0  0  0  0999 V2000
    6.6648    2.5248    0.3886 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4222    1.0470    0.2373 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9426    0.7572    0.1688 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4381    0.1811   -0.8727 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0678   -0.1908   -1.1464 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1139    0.0418   -0.0510 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4229   -0.7683    1.1444 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7561   -0.4351    2.2339 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2074   -2.1903    0.6608 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9253   -2.0438   -0.1424 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7313   -0.5590   -0.3814 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2074   -0.0209    0.6583 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6177   -0.4968    0.5037 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1488   -0.0624   -0.8318 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5597   -0.5494   -0.9942 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4333    0.0256    0.0849 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8707   -0.4277   -0.0639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7142    0.1558    1.0187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7513    1.6239    0.9689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1984    2.2801    0.0728 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4529    2.3008    1.9965 O   0  0  0  0  0  1  0  0  0  0  0  0
    5.9251    3.0811   -0.1924 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6944    2.7265    0.0082 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6926    2.8348    1.4721 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8966    0.7398   -0.7199 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8995    0.5286    1.0869 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3196    1.0694    0.9904 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1637   -0.0704   -1.6877 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7089    0.4408   -2.0326 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9901   -1.2417   -1.5763 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0100    1.1088    0.1509 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0047   -2.5098   -0.0225 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0932   -2.8858    1.5167 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1012   -2.4994    0.4211 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0011   -2.6000   -1.1015 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4590   -0.3901   -1.4116 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2254    1.0905    0.5366 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1649   -0.3002    1.6699 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7152   -1.6018    0.5494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2076   -0.0002    1.3101 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1423    1.0511   -0.8890 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5225   -0.4129   -1.6794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5080   -1.6726   -0.9184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9436   -0.2976   -1.9996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1308   -0.3678    1.1030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2864    1.0946    0.1266 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2324   -0.1015   -1.0779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9190   -1.5423   -0.0028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7397   -0.2784    0.9710 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2898   -0.1871    2.0035 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 11  6  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  2 25  1  0
  2 26  1  0
  3 27  1  0
  4 28  1  0
  5 29  1  0
  5 30  1  0
  6 31  1  0
  9 32  1  0
  9 33  1  0
 10 34  1  0
 10 35  1  0
 11 36  1  0
 12 37  1  0
 12 38  1  0
 13 39  1  0
 13 40  1  0
 14 41  1  0
 14 42  1  0
 15 43  1  0
 15 44  1  0
 16 45  1  0
 16 46  1  0
 17 47  1  0
 17 48  1  0
 18 49  1  0
 18 50  1  0
M  CHG  1  21  -1
M  END

HEADER    PROTEIN                                 14-MAY-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   14-MAY-15         0                                  
HETATM    1  C   UNK     0      -1.013   9.917   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.333   8.410   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.189   7.380   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.509   5.873   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.636   4.843   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.100   5.319   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.576   6.783   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       1.671   8.029   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       4.116   6.783   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.592   5.319   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.346   4.414   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.346   2.874   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.680   2.104   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.013   2.874   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       7.347   2.104   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.681   2.874   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      10.015   2.104   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      11.348   2.874   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      12.682   2.104   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      14.016   2.874   0.000  0.00  0.00           O-1
HETATM   21  O   UNK     0      12.682   0.564   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   11                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12    6                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19                                                            
MASTER        0    0    0    0    0    0    0    0   21    0   42    0
END

COMPND    HMDB0304145
HETATM    1  C1  UNL     1       6.665   2.525   0.389  1.00  0.00           C  
HETATM    2  C2  UNL     1       6.422   1.047   0.237  1.00  0.00           C  
HETATM    3  C3  UNL     1       4.943   0.757   0.169  1.00  0.00           C  
HETATM    4  C4  UNL     1       4.438   0.181  -0.873  1.00  0.00           C  
HETATM    5  C5  UNL     1       3.068  -0.191  -1.146  1.00  0.00           C  
HETATM    6  C6  UNL     1       2.114   0.042  -0.051  1.00  0.00           C  
HETATM    7  C7  UNL     1       2.423  -0.768   1.144  1.00  0.00           C  
HETATM    8  O1  UNL     1       2.756  -0.435   2.234  1.00  0.00           O  
HETATM    9  C8  UNL     1       2.207  -2.190   0.661  1.00  0.00           C  
HETATM   10  C9  UNL     1       0.925  -2.044  -0.142  1.00  0.00           C  
HETATM   11  C10 UNL     1       0.731  -0.559  -0.381  1.00  0.00           C  
HETATM   12  C11 UNL     1      -0.207  -0.021   0.658  1.00  0.00           C  
HETATM   13  C12 UNL     1      -1.618  -0.497   0.504  1.00  0.00           C  
HETATM   14  C13 UNL     1      -2.149  -0.062  -0.832  1.00  0.00           C  
HETATM   15  C14 UNL     1      -3.560  -0.549  -0.994  1.00  0.00           C  
HETATM   16  C15 UNL     1      -4.433   0.026   0.085  1.00  0.00           C  
HETATM   17  C16 UNL     1      -5.871  -0.428  -0.064  1.00  0.00           C  
HETATM   18  C17 UNL     1      -6.714   0.156   1.019  1.00  0.00           C  
HETATM   19  C18 UNL     1      -6.751   1.624   0.969  1.00  0.00           C  
HETATM   20  O2  UNL     1      -6.198   2.280   0.073  1.00  0.00           O  
HETATM   21  O3  UNL     1      -7.453   2.301   1.996  1.00  0.00           O1-
HETATM   22  H1  UNL     1       5.925   3.081  -0.192  1.00  0.00           H  
HETATM   23  H2  UNL     1       7.694   2.727   0.008  1.00  0.00           H  
HETATM   24  H3  UNL     1       6.693   2.835   1.472  1.00  0.00           H  
HETATM   25  H4  UNL     1       6.897   0.740  -0.720  1.00  0.00           H  
HETATM   26  H5  UNL     1       6.900   0.529   1.087  1.00  0.00           H  
HETATM   27  H6  UNL     1       4.320   1.069   0.990  1.00  0.00           H  
HETATM   28  H7  UNL     1       5.164  -0.070  -1.688  1.00  0.00           H  
HETATM   29  H8  UNL     1       2.709   0.441  -2.033  1.00  0.00           H  
HETATM   30  H9  UNL     1       2.990  -1.242  -1.576  1.00  0.00           H  
HETATM   31  H10 UNL     1       2.010   1.109   0.151  1.00  0.00           H  
HETATM   32  H11 UNL     1       3.005  -2.510  -0.023  1.00  0.00           H  
HETATM   33  H12 UNL     1       2.093  -2.886   1.517  1.00  0.00           H  
HETATM   34  H13 UNL     1       0.101  -2.499   0.421  1.00  0.00           H  
HETATM   35  H14 UNL     1       1.001  -2.600  -1.101  1.00  0.00           H  
HETATM   36  H15 UNL     1       0.459  -0.390  -1.412  1.00  0.00           H  
HETATM   37  H16 UNL     1      -0.225   1.090   0.537  1.00  0.00           H  
HETATM   38  H17 UNL     1       0.165  -0.300   1.670  1.00  0.00           H  
HETATM   39  H18 UNL     1      -1.715  -1.602   0.549  1.00  0.00           H  
HETATM   40  H19 UNL     1      -2.208  -0.000   1.310  1.00  0.00           H  
HETATM   41  H20 UNL     1      -2.142   1.051  -0.889  1.00  0.00           H  
HETATM   42  H21 UNL     1      -1.522  -0.413  -1.679  1.00  0.00           H  
HETATM   43  H22 UNL     1      -3.508  -1.673  -0.918  1.00  0.00           H  
HETATM   44  H23 UNL     1      -3.944  -0.298  -2.000  1.00  0.00           H  
HETATM   45  H24 UNL     1      -4.131  -0.368   1.103  1.00  0.00           H  
HETATM   46  H25 UNL     1      -4.286   1.095   0.127  1.00  0.00           H  
HETATM   47  H26 UNL     1      -6.232  -0.101  -1.078  1.00  0.00           H  
HETATM   48  H27 UNL     1      -5.919  -1.542  -0.003  1.00  0.00           H  
HETATM   49  H28 UNL     1      -7.740  -0.278   0.971  1.00  0.00           H  
HETATM   50  H29 UNL     1      -6.290  -0.187   2.003  1.00  0.00           H  
CONECT    1    2   22   23   24
CONECT    2    3   25   26
CONECT    3    4    4   27
CONECT    4    5   28
CONECT    5    6   29   30
CONECT    6    7   11   31
CONECT    7    8    8    9
CONECT    9   10   32   33
CONECT   10   11   34   35
CONECT   11   12   36
CONECT   12   13   37   38
CONECT   13   14   39   40
CONECT   14   15   41   42
CONECT   15   16   43   44
CONECT   16   17   45   46
CONECT   17   18   47   48
CONECT   18   19   49   50
CONECT   19   20   20   21
END

HMDB0304145
     RDKit          3D
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate
 50 50  0  0  0  0  0  0  0  0999 V2000
    6.6648    2.5248    0.3886 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4222    1.0470    0.2373 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9426    0.7572    0.1688 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4381    0.1811   -0.8727 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0678   -0.1908   -1.1464 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1139    0.0418   -0.0510 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4229   -0.7683    1.1444 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7561   -0.4351    2.2339 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2074   -2.1903    0.6608 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9253   -2.0438   -0.1424 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7313   -0.5590   -0.3814 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2074   -0.0209    0.6583 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6177   -0.4968    0.5037 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1488   -0.0624   -0.8318 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5597   -0.5494   -0.9942 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4333    0.0256    0.0849 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8707   -0.4277   -0.0639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7142    0.1558    1.0187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7513    1.6239    0.9689 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1984    2.2801    0.0728 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4529    2.3008    1.9965 O   0  0  0  0  0  1  0  0  0  0  0  0
    5.9251    3.0811   -0.1924 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6944    2.7265    0.0082 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6926    2.8348    1.4721 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8966    0.7398   -0.7199 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8995    0.5286    1.0869 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3196    1.0694    0.9904 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1637   -0.0704   -1.6877 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7089    0.4408   -2.0326 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9901   -1.2417   -1.5763 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0100    1.1088    0.1509 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0047   -2.5098   -0.0225 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0932   -2.8858    1.5167 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1012   -2.4994    0.4211 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0011   -2.6000   -1.1015 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4590   -0.3901   -1.4116 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2254    1.0905    0.5366 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1649   -0.3002    1.6699 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7152   -1.6018    0.5494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2076   -0.0002    1.3101 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1423    1.0511   -0.8890 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5225   -0.4129   -1.6794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5080   -1.6726   -0.9184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9436   -0.2976   -1.9996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1308   -0.3678    1.1030 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2864    1.0946    0.1266 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2324   -0.1015   -1.0779 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9190   -1.5423   -0.0028 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7397   -0.2784    0.9710 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2898   -0.1871    2.0035 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  3
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 11  6  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  2 25  1  0
  2 26  1  0
  3 27  1  0
  4 28  1  0
  5 29  1  0
  5 30  1  0
  6 31  1  0
  9 32  1  0
  9 33  1  0
 10 34  1  0
 10 35  1  0
 11 36  1  0
 12 37  1  0
 12 38  1  0
 13 39  1  0
 13 40  1  0
 14 41  1  0
 14 42  1  0
 15 43  1  0
 15 44  1  0
 16 45  1  0
 16 46  1  0
 17 47  1  0
 17 48  1  0
 18 49  1  0
 18 50  1  0
M  CHG  1  21  -1
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
8-[3-oxo-2-(Pent-2-en-1-yl)cyclopentyl]octanoic acid	Generator
3-oxo-2-(cis-2'-Pentenyl)-cyclopentane-1-octanoic acid	Generator

Chemical Formula

C₁₈H₂₉O₃

Average Molecular Weight

293.428

Monoisotopic Molecular Weight

293.212218374

IUPAC Name

8-[3-oxo-2-(pent-2-en-1-yl)cyclopentyl]octanoate

Traditional Name

8-[3-oxo-2-(pent-2-en-1-yl)cyclopentyl]octanoate

CAS Registry Number

Not Available

SMILES

CCC=CCC1C(CCCCCCCC([O-])=O)CCC1=O

InChI Identifier

InChI=1S/C18H30O3/c1-2-3-7-11-16-15(13-14-17(16)19)10-8-5-4-6-9-12-18(20)21/h3,7,15-16H,2,4-6,8-14H2,1H3,(H,20,21)/p-1

InChI Key

BZXZFDKIRZBJEP-UHFFFAOYSA-M

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Eicosanoids

Direct Parent

Prostaglandins and related compounds

Alternative Parents

Substituents

Prostaglandin skeleton
Medium-chain fatty acid
Cyclic ketone
Ketone
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Organic anion
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

a long-chain fatty acid (CPD-730 )

Ontology

Not Available

Herbs and Spices (FooDB: FOOD00866)

Nut

Almond (FooDB: FOOD00148)
Brazil nut (FooDB: FOOD00024)
Cashew nut (FooDB: FOOD00011)
Chestnut (FooDB: FOOD00045)
Hazelnut (FooDB: FOOD00376)
Peanut (FooDB: FOOD00016)
Pecan nut (FooDB: FOOD00044)
Pine nut (FooDB: FOOD00138)
Pistachio (FooDB: FOOD00140)
Walnut (FooDB: FOOD00608)
Acorn (FooDB: FOOD00282)
Beech nut (FooDB: FOOD00299)
Butternut (FooDB: FOOD00316)
Chinese chestnut (FooDB: FOOD00331)
European chestnut (FooDB: FOOD00363)
Hickory nut (FooDB: FOOD00377)
Macadamia nut (FooDB: FOOD00525)
Mixed nuts (FooDB: FOOD00771)
Pili nut (FooDB: FOOD00432)
Colorado pinyon (FooDB: FOOD00433)
Black walnut (FooDB: FOOD00093)
Common walnut (FooDB: FOOD00094)
Japanese chestnut (FooDB: FOOD00385)
Common hazelnut (FooDB: FOOD00062)
Macadamia nut (M. tetraphylla) (FooDB: FOOD00225)
Japanese walnut (FooDB: FOOD00240)
Nuts (FooDB: FOOD00869)

Fruit

Pome

Drupe

Apricot (FooDB: FOOD00144)
Prunus (Cherry, Plum) (FooDB: FOOD00143)
Nectarine (FooDB: FOOD00229)
Peach (FooDB: FOOD00149)
European plum (FooDB: FOOD00147)
Sour cherry (FooDB: FOOD00146)
Sweet cherry (FooDB: FOOD00145)
Common chokecherry (FooDB: FOOD00562)
Peach (var.) (FooDB: FOOD00230)

Tropical fruit

Berry

Bilberry (FooDB: FOOD00193)
Rubus (Blackberry, Raspberry) (FooDB: FOOD00160)
Vaccinium (Blueberry, Cranberry, Huckleberry) (FooDB: FOOD00188)
Blackcurrant (FooDB: FOOD00155)
Redcurrant (FooDB: FOOD00156)
Elderberry (FooDB: FOOD00358)
Gooseberry (FooDB: FOOD00157)
Grape (FooDB: FOOD00369)
Lingonberry (FooDB: FOOD00194)
Loganberry (FooDB: FOOD00400)
Strawberry (FooDB: FOOD00083)
Boysenberry (FooDB: FOOD00542)
American cranberry (FooDB: FOOD00192)
Common grape (FooDB: FOOD00204)
Strawberry guava (FooDB: FOOD00482)
Black mulberry (FooDB: FOOD00117)
Red raspberry (FooDB: FOOD00162)
Muscadine grape (FooDB: FOOD00203)
Salmonberry (FooDB: FOOD00456)
Alaska blueberry (FooDB: FOOD00380)
Sea-buckthornberry (FooDB: FOOD00087)
Black elderberry (FooDB: FOOD00166)
Black crowberry (FooDB: FOOD00075)
Black huckleberry (FooDB: FOOD00084)
Mulberry (FooDB: FOOD00116)
Black chokeberry (FooDB: FOOD00136)
Cloudberry (FooDB: FOOD00161)
Black raspberry (FooDB: FOOD00163)
Rowanberry (FooDB: FOOD00176)
Lowbush blueberry (FooDB: FOOD00189)
Sparkleberry (FooDB: FOOD00190)
Highbush blueberry (FooDB: FOOD00191)
Arctic blackberry (FooDB: FOOD00207)
Bayberry (FooDB: FOOD00209)
Elliott's blueberry (FooDB: FOOD00210)
Canada blueberry (FooDB: FOOD00211)
Bog bilberry (FooDB: FOOD00212)
Buffalo currant (FooDB: FOOD00213)
European cranberry (FooDB: FOOD00217)
Deerberry (FooDB: FOOD00218)
Cascade huckleberry (FooDB: FOOD00220)
Oval-leaf huckleberry (FooDB: FOOD00221)
Evergreen huckleberry (FooDB: FOOD00222)
Red huckleberry (FooDB: FOOD00223)
Summer grape (FooDB: FOOD00227)
Fox grape (FooDB: FOOD00228)
Half-highbush blueberry (FooDB: FOOD00248)
Jostaberry (FooDB: FOOD00257)
Sweet rowanberry (FooDB: FOOD00265)
Skunk currant (FooDB: FOOD00267)
Squashberry (FooDB: FOOD00344)
Ohelo berry (FooDB: FOOD00419)
Chinese bayberry (FooDB: FOOD00852)
Saskatoon berry (FooDB: FOOD00884)
Nanking cherry (FooDB: FOOD00885)

Other fruit

Date (FooDB: FOOD00135)
Fig (FooDB: FOOD00081)
Jujube (FooDB: FOOD00388)

Citrus

Grapefruit (FooDB: FOOD00256)
Lemon (FooDB: FOOD00054)
Lime (FooDB: FOOD00053)
Sweet orange (FooDB: FOOD00057)
Mandarin orange (Clementine, Tangerine) (FooDB: FOOD00056)
Persian lime (FooDB: FOOD00543)
Pummelo (FooDB: FOOD00055)
Grapefruit/Pummelo hybrid (FooDB: FOOD00255)
Citrus (FooDB: FOOD00859)

Fruits (FooDB: FOOD00871)

Vegetable

Shoot vegetable

Fruit vegetable

Eggplant (FooDB: FOOD00174)
Avocado (FooDB: FOOD00130)
Groundcherry (FooDB: FOOD00371)
Olive (FooDB: FOOD00121)
Pepper (FooDB: FOOD00040)
Garden tomato (FooDB: FOOD00171)
Mexican groundcherry (FooDB: FOOD00491)
Green bell pepper (FooDB: FOOD00877)
Yellow bell pepper (FooDB: FOOD00878)
Red bell pepper (FooDB: FOOD00880)
Italian sweet red pepper (FooDB: FOOD00881)
Garden tomato (var.) (FooDB: FOOD00173)
Cherry tomato (FooDB: FOOD00172)
Pepper (C. baccatum) (FooDB: FOOD00231)
Pepper (C. chinense) (FooDB: FOOD00232)
Pepper (Capsicum) (FooDB: FOOD00233)
Pepper (C. frutescens) (FooDB: FOOD00428)
Pepper (C. pubescens) (FooDB: FOOD00849)
Orange bell pepper (FooDB: FOOD00879)

Root vegetable

Cabbage

Leaf vegetable

Lettuce (FooDB: FOOD00095)
Swiss chard (FooDB: FOOD00237)
Garden cress (FooDB: FOOD00099)
Endive (FooDB: FOOD00048)
Spinach (FooDB: FOOD00178)
Common beet (FooDB: FOOD00025)
Garland chrysanthemum (FooDB: FOOD00333)
Jute (FooDB: FOOD00389)
Lambsquarters (FooDB: FOOD00394)
New Zealand spinach (FooDB: FOOD00415)
Swamp cabbage (FooDB: FOOD00091)
Rocket salad (ssp.) (FooDB: FOOD00077)
Yautia (FooDB: FOOD00510)
Romaine lettuce (FooDB: FOOD00888)
Rocket salad (FooDB: FOOD00244)
Chicory leaves (FooDB: FOOD00250)
Corn salad (FooDB: FOOD00340)
Malabar spinach (FooDB: FOOD00404)
Ostrich fern (FooDB: FOOD00556)
Green vegetables (FooDB: FOOD00872)

Mushroom

Tuber

Onion-family vegetable

Leek (FooDB: FOOD00007)
Allium (FooDB: FOOD00005)
Wild leek (FooDB: FOOD00396)
Shallot (FooDB: FOOD00243)
Garden onion (FooDB: FOOD00006)
Garden onion (var.) (FooDB: FOOD00226)
Onion-family vegetables (FooDB: FOOD00855)
Green onion (FooDB: FOOD00963)
Red onion (FooDB: FOOD00962)

Other vegetable

Okra (FooDB: FOOD00420)
Horseradish tree (FooDB: FOOD00379)
Sacred lotus (FooDB: FOOD00402)
Tree fern (FooDB: FOOD00797)
Chinese water chestnut (FooDB: FOOD00332)
Nopal (FooDB: FOOD00416)
Carob (FooDB: FOOD00321)
Agave (FooDB: FOOD00563)
Narrowleaf cattail (FooDB: FOOD00564)
Giant butterbur (FooDB: FOOD00314)
Sesbania flower (FooDB: FOOD00469)

Stalk vegetable

Brassica

Brassicas (FooDB: FOOD00857)

Cereal and cereal product

Other bread

Other bread (FooDB: FOOD00269)

Cereal

Cereal product

Dough

Sourdough (FooDB: FOOD00275)

Cereals and cereal products (FooDB: FOOD00858)

Pulse

Bean

Lentil

Lentils (FooDB: FOOD00098)

Pea

Other pulse

White lupine (FooDB: FOOD00403)
Lupine (FooDB: FOOD00104)

Pulses (FooDB: FOOD00867)

Soy

Soy bean (FooDB: FOOD00085)

Soy product

Other soy product (FooDB: FOOD00271)

Abalone (FooDB: FOOD00279)
Conch (FooDB: FOOD00611)

Gourd

Chayote (FooDB: FOOD00325)
Cucumber (FooDB: FOOD00065)
Muskmelon (FooDB: FOOD00064)
Cucurbita (FooDB: FOOD00066)
Watermelon (FooDB: FOOD00052)
Bitter gourd (FooDB: FOOD00115)
Calabash (FooDB: FOOD00318)
Towel gourd (FooDB: FOOD00492)
Winter squash (FooDB: FOOD00283)
Butternut squash (FooDB: FOOD00317)
Wax gourd (FooDB: FOOD00499)
Green zucchini (FooDB: FOOD00875)
Yellow zucchini (FooDB: FOOD00876)
Japanese pumpkin (FooDB: FOOD00886)
Sunburst squash (pattypan squash) (FooDB: FOOD00874)
Tinda (FooDB: FOOD00559)
Horned melon (FooDB: FOOD00761)

Tea

Herbal tea

Greenthread tea (FooDB: FOOD00820)

Cocoa and cocoa product

Cocoa

Cocoa bean (FooDB: FOOD00182)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	5.48	ALOGPS
logP	5.08	ChemAxon
logS	-5.6	ALOGPS
pKa (Strongest Acidic)	4.72	ChemAxon
pKa (Strongest Basic)	-7.4	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	57.2 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	97 m³·mol⁻¹	ChemAxon
Polarizability	35.3 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	177.466	32859911
AllCCS	[M+H-H2O]+	174.389	32859911
AllCCS	[M+Na]+	181.133	32859911
AllCCS	[M+NH4]+	180.315	32859911
AllCCS	[M-H]-	178.94	32859911
AllCCS	[M+Na-2H]-	179.797	32859911
AllCCS	[M+HCOO]-	180.884	32859911
DeepCCS	[M+H]+	174.765	30932474
DeepCCS	[M-H]-	172.385	30932474
DeepCCS	[M-2H]-	205.46	30932474
DeepCCS	[M+Na]+	181.532	30932474

Predicted Kovats Retention Indices

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TMS,isomer #1	CCC=CCC1=C(O[Si](C)(C)C)CCC1CCCCCCCC(=O)[O-]	2343.1	Semi standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TMS,isomer #1	CCC=CCC1=C(O[Si](C)(C)C)CCC1CCCCCCCC(=O)[O-]	2306.1	Standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TMS,isomer #1	CCC=CCC1=C(O[Si](C)(C)C)CCC1CCCCCCCC(=O)[O-]	2713.4	Standard polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TMS,isomer #2	CCC=CCC1C(O[Si](C)(C)C)=CCC1CCCCCCCC(=O)[O-]	2333.0	Semi standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TMS,isomer #2	CCC=CCC1C(O[Si](C)(C)C)=CCC1CCCCCCCC(=O)[O-]	2327.6	Standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TMS,isomer #2	CCC=CCC1C(O[Si](C)(C)C)=CCC1CCCCCCCC(=O)[O-]	2734.7	Standard polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TBDMS,isomer #1	CCC=CCC1=C(O[Si](C)(C)C(C)(C)C)CCC1CCCCCCCC(=O)[O-]	2593.7	Semi standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TBDMS,isomer #1	CCC=CCC1=C(O[Si](C)(C)C(C)(C)C)CCC1CCCCCCCC(=O)[O-]	2484.6	Standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TBDMS,isomer #1	CCC=CCC1=C(O[Si](C)(C)C(C)(C)C)CCC1CCCCCCCC(=O)[O-]	2797.4	Standard polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TBDMS,isomer #2	CCC=CCC1C(O[Si](C)(C)C(C)(C)C)=CCC1CCCCCCCC(=O)[O-]	2596.9	Semi standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TBDMS,isomer #2	CCC=CCC1C(O[Si](C)(C)C(C)(C)C)=CCC1CCCCCCCC(=O)[O-]	2453.0	Standard non polar	33892256
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate,1TBDMS,isomer #2	CCC=CCC1C(O[Si](C)(C)C(C)(C)C)=CCC1CCCCCCCC(=O)[O-]	2805.8	Standard polar	33892256

Spectra

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate 10V, Negative-QTOF	splash10-0006-0090000000-90e8c16402e88b84f2ed	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate 20V, Negative-QTOF	splash10-002g-0090000000-a66e08ea653b583f9f27	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate 40V, Negative-QTOF	splash10-005c-6980000000-6d3c66e8e500aea609f6	2019-02-23	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB030450

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

25200693

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate (HMDB0304145)

MOL for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

3D MOL for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

3D SDF for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

3D-SDF for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

PDB for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

3D PDB for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

SMILES for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

INCHI for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

Structure for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

3D Structure for HMDB0304145 (3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoate)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Derivatized

MS/MS Spectra