Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 10:25:53 UTC
Update Date2021-09-24 10:25:53 UTC
HMDB IDHMDB0304523
Secondary Accession NumbersNone
Metabolite Identification
Common Nameubiquinol-8
DescriptionUbiquinol 8 is a member of the class of compounds known as polyterpenoids. Polyterpenoids are terpenoids consisting of more than eight isoprene units. Ubiquinol 8 is practically insoluble (in water) and a very weakly acidic compound (based on its pKa). Ubiquinol 8 can be found in a number of food items such as garden cress, lupine, feijoa, and coriander, which makes ubiquinol 8 a potential biomarker for the consumption of these food products. Ubiquinol 8 can be found primarily in blood. Ubiquinol 8 exists in all living species, ranging from bacteria to humans. In humans, ubiquinol 8 is involved in mitochondrial electron transport chain, which is a metabolic disorder. Moreover, ubiquinol 8 is found to be associated with beta-thalassemia.
Structure
Thumb
Synonyms
ValueSource
Ubiquinol(8)HMDB
Ubiquinol-8HMDB
Chemical FormulaC49H78O4
Average Molecular Weight731.1412
Monoisotopic Molecular Weight730.590010984
IUPAC Name2,3-dimethoxy-5-methyl-6-[(2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl]cyclohexa-2,5-diene-1,4-diol
Traditional Namereduced ubiquinone
CAS Registry NumberNot Available
SMILES
[H]\C(CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC1=C(C)C(O)C(OC)=C(OC)C1O)=C(\C)CCC=C(C)C
InChI Identifier
InChI=1S/C49H78O4/c1-36(2)20-13-21-37(3)22-14-23-38(4)24-15-25-39(5)26-16-27-40(6)28-17-29-41(7)30-18-31-42(8)32-19-33-43(9)34-35-45-44(10)46(50)48(52-11)49(53-12)47(45)51/h20,22,24,26,28,30,32,34,46-47,50-51H,13-19,21,23,25,27,29,31,33,35H2,1-12H3/b37-22+,38-24+,39-26+,40-28+,41-30+,42-32+,43-34+
InChI KeyFLVUMORHBJZINO-SGHXUWJISA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as polyterpenoids. These are terpenoids consisting of more than eight isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassPolyterpenoids
Direct ParentPolyterpenoids
Alternative Parents
Substituents
  • Polyterpenoid
  • Secondary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP8.66ALOGPS
logP12ChemAxon
logS-6.3ALOGPS
pKa (Strongest Acidic)12.91ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area58.92 ŲChemAxon
Rotatable Bond Count25ChemAxon
Refractivity240.23 m³·mol⁻¹ChemAxon
Polarizability93.43 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+293.21432859911
AllCCS[M+H-H2O]+292.12232859911
AllCCS[M+Na]+294.51332859911
AllCCS[M+NH4]+294.22332859911
AllCCS[M-H]-255.1532859911
AllCCS[M+Na-2H]-260.62332859911
AllCCS[M+HCOO]-266.69432859911
DeepCCS[M+H]+291.43630932474
DeepCCS[M-H]-289.54130932474
DeepCCS[M-2H]-323.26330932474
DeepCCS[M+Na]+297.28430932474

Predicted Kovats Retention Indices

Not Available
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - ubiquinol-8 GC-MS (Non-derivatized) - 70eV, Positivesplash10-014r-1156349700-ec14f02a485496f0313f2017-11-06Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 10V, Positive-QTOFsplash10-001i-0212123900-73a2eccad4e0cbe4395d2015-09-15Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 20V, Positive-QTOFsplash10-000t-0558791000-d8aab750f6f0b06f8aec2015-09-15Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 40V, Positive-QTOFsplash10-001i-2346792000-adcd3425e589e189faa42015-09-15Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 10V, Negative-QTOFsplash10-004i-0000000900-9826a54f653e9710bcd62015-09-15Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 20V, Negative-QTOFsplash10-01t9-0000019800-029f962feb9d2e2603b42015-09-15Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 40V, Negative-QTOFsplash10-03e9-3000039400-06bbf6b9d509f84c96112015-09-15Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 10V, Positive-QTOFsplash10-001i-0212123900-73a2eccad4e0cbe4395d2015-09-16Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 20V, Positive-QTOFsplash10-000t-0558791000-d8aab750f6f0b06f8aec2015-09-16Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 40V, Positive-QTOFsplash10-001i-2346792000-adcd3425e589e189faa42015-09-16Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 10V, Negative-QTOFsplash10-004i-0000000900-9826a54f653e9710bcd62015-09-16Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 20V, Negative-QTOFsplash10-01t9-0000019800-029f962feb9d2e2603b42015-09-16Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 40V, Negative-QTOFsplash10-03e9-3000039400-06bbf6b9d509f84c96112015-09-16Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 10V, Positive-QTOFsplash10-003r-0010129300-81bfea4f4a61e35276a62021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 20V, Positive-QTOFsplash10-0axr-1021229000-3d3c31a9ed067f7a5c2a2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 40V, Positive-QTOFsplash10-052k-4614987000-1c743f819efeeea0187e2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 10V, Negative-QTOFsplash10-004i-0000000900-767365a4d78322bb245b2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 20V, Negative-QTOFsplash10-004i-0300112900-32f47e2816aa922d26402021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - ubiquinol-8 40V, Negative-QTOFsplash10-0bt9-1910272300-fb7f9c8d5c9d09d341912021-10-21Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)2022-08-20Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB031234
KNApSAcK IDNot Available
Chemspider ID17216048
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound22833558
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available