Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 10:39:16 UTC
Update Date2021-09-24 10:39:16 UTC
HMDB IDHMDB0304550
Secondary Accession NumbersNone
Metabolite Identification
Common NameDIBOA dihexose
Description(2R)-2-{[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-4-hydroxy-7-methoxy-3,4-dihydro-2H-1,4-benzoxazin-3-one belongs to the class of organic compounds known as benzoxazinones. These are organic compounds containing a benzene fused to an oxazine ring (a six-member aliphatic ring with four carbon atoms, one oxygen atom, and one nitrogen atom) bearing a ketone group. Based on a literature review very few articles have been published on (2R)-2-{[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-4-hydroxy-7-methoxy-3,4-dihydro-2H-1,4-benzoxazin-3-one.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC21H29NO15
Average Molecular Weight535.455
Monoisotopic Molecular Weight535.153719238
IUPAC Name(2R)-2-{[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-4-hydroxy-7-methoxy-3,4-dihydro-2H-1,4-benzoxazin-3-one
Traditional Name(2R)-2-{[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-4-hydroxy-7-methoxy-2H-1,4-benzoxazin-3-one
CAS Registry NumberNot Available
SMILES
COC1=CC2=C(C=C1)N(O)C(=O)[C@@H](O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](OC3OC(CO)C(O)C(O)C3O)[C@H]1O)O2
InChI Identifier
InChI=1S/C21H29NO15/c1-32-7-2-3-8-9(4-7)33-21(18(30)22(8)31)37-20-16(29)17(13(26)11(6-24)35-20)36-19-15(28)14(27)12(25)10(5-23)34-19/h2-4,10-17,19-21,23-29,31H,5-6H2,1H3/t10?,11-,12?,13-,14?,15?,16-,17+,19?,20+,21-/m1/s1
InChI KeyMPXXIXSHUUWHJH-ZPHUSMHHSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzoxazinones. These are organic compounds containing a benzene fused to an oxazine ring (a six-member aliphatic ring with four carbon atoms, one oxygen atom, and one nitrogen atom) bearing a ketone group.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassBenzoxazines
Sub ClassBenzoxazinones
Direct ParentBenzoxazinones
Alternative Parents
Substituents
  • O-glycosyl compound
  • Glycosyl compound
  • Disaccharide
  • Benzoxazinone
  • Benzomorpholine
  • Anisole
  • Alkyl aryl ether
  • Benzenoid
  • Oxazinane
  • Oxane
  • Secondary alcohol
  • Hydroxamic acid
  • Oxacycle
  • Azacycle
  • Polyol
  • Ether
  • Carboxylic acid derivative
  • Acetal
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-1.6ALOGPS
logP-3.6ChemAxon
logS-1.1ALOGPS
pKa (Strongest Acidic)7.85ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count15ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area237.53 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity113.3 m³·mol⁻¹ChemAxon
Polarizability49.2 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+217.30532859911
AllCCS[M+H-H2O]+215.76832859911
AllCCS[M+Na]+219.08932859911
AllCCS[M+NH4]+218.69632859911
AllCCS[M-H]-212.51832859911
AllCCS[M+Na-2H]-213.45632859911
AllCCS[M+HCOO]-214.63232859911
DeepCCS[M+H]+209.83930932474
DeepCCS[M-H]-208.01430932474
DeepCCS[M-2H]-241.54930932474
DeepCCS[M+Na]+215.44530932474

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
DIBOA dihexose,3TBDMS,isomer #19COC1=CC=C2C(=C1)O[C@H](O[C@@H]1O[C@H](CO)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H](OC3OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C3O)[C@H]1O[Si](C)(C)C(C)(C)C)C(=O)N2O4631.3Semi standard non polar33892256
DIBOA dihexose,3TBDMS,isomer #19COC1=CC=C2C(=C1)O[C@H](O[C@@H]1O[C@H](CO)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H](OC3OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C3O)[C@H]1O[Si](C)(C)C(C)(C)C)C(=O)N2O4804.1Standard non polar33892256
DIBOA dihexose,3TBDMS,isomer #19COC1=CC=C2C(=C1)O[C@H](O[C@@H]1O[C@H](CO)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H](OC3OC(CO[Si](C)(C)C(C)(C)C)C(O)C(O)C3O)[C@H]1O[Si](C)(C)C(C)(C)C)C(=O)N2O6205.4Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - DIBOA dihexose 10V, Positive-QTOFsplash10-000i-0102090000-c06a59835fda434418002021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - DIBOA dihexose 20V, Positive-QTOFsplash10-0006-0921000000-25da6085ced34cf22ecc2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - DIBOA dihexose 40V, Positive-QTOFsplash10-0uds-3920000000-944c9e11ad6c0c5e7ef22021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - DIBOA dihexose 10V, Negative-QTOFsplash10-001l-0713090000-e942d975479e9a9be8782021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - DIBOA dihexose 20V, Negative-QTOFsplash10-01ox-2902320000-186fbe2b737486ddcca72021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - DIBOA dihexose 40V, Negative-QTOFsplash10-0r03-4911000000-354e94e23899b77439cd2021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB093479
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available