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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-10-01 18:05:59 UTC
Update Date2021-10-01 18:05:59 UTC
HMDB IDHMDB0304947
Secondary Accession NumbersNone
Metabolite Identification
Common NameNordeoxycholic acid
DescriptionSCHEMBL15145513 belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. Dihydroxy bile acids, alcohols and derivatives are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups. Based on a literature review very few articles have been published on SCHEMBL15145513.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC23H38O4
Average Molecular Weight378.553
Monoisotopic Molecular Weight378.277009704
IUPAC Name3-{5,16-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl}butanoic acid
Traditional Name3-{5,16-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl}butanoic acid
CAS Registry NumberNot Available
SMILES
CC(CC(O)=O)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O)C12C
InChI Identifier
InChI=1S/C23H38O4/c1-13(10-21(26)27)17-6-7-18-16-5-4-14-11-15(24)8-9-22(14,2)19(16)12-20(25)23(17,18)3/h13-20,24-25H,4-12H2,1-3H3,(H,26,27)
InChI KeyPLRQOCVIINWCFA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. Dihydroxy bile acids, alcohols and derivatives are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassBile acids, alcohols and derivatives
Direct ParentDihydroxy bile acids, alcohols and derivatives
Alternative Parents
Substituents
  • Dihydroxy bile acid, alcohol, or derivatives
  • Steroid acid
  • 3-hydroxysteroid
  • 12-hydroxysteroid
  • Hydroxysteroid
  • Cyclic alcohol
  • Secondary alcohol
  • Carboxylic acid
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Organooxygen compound
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.02ALOGPS
logP3.35ChemAxon
logS-4ALOGPS
pKa (Strongest Acidic)4.53ChemAxon
pKa (Strongest Basic)-0.35ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity104.6 m³·mol⁻¹ChemAxon
Polarizability44.17 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+196.97732859911
AllCCS[M+H-H2O]+194.63832859911
AllCCS[M+Na]+199.74532859911
AllCCS[M+NH4]+199.12932859911
AllCCS[M-H]-196.032859911
AllCCS[M+Na-2H]-197.06232859911
AllCCS[M+HCOO]-198.38432859911
DeepCCS[M-2H]-220.82930932474
DeepCCS[M+Na]+196.09330932474

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Nordeoxycholic acid,1TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O)C12C3305.9Semi standard non polar33892256
Nordeoxycholic acid,1TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O)C12C3105.0Standard non polar33892256
Nordeoxycholic acid,1TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O)C12C3641.5Standard polar33892256
Nordeoxycholic acid,1TMS,isomer #2CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O)C12C3383.2Semi standard non polar33892256
Nordeoxycholic acid,1TMS,isomer #2CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O)C12C3028.7Standard non polar33892256
Nordeoxycholic acid,1TMS,isomer #2CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O)C12C3630.6Standard polar33892256
Nordeoxycholic acid,1TMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C)C12C3335.9Semi standard non polar33892256
Nordeoxycholic acid,1TMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C)C12C3004.6Standard non polar33892256
Nordeoxycholic acid,1TMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C)C12C3547.6Standard polar33892256
Nordeoxycholic acid,2TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O)C12C3350.1Semi standard non polar33892256
Nordeoxycholic acid,2TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O)C12C3124.3Standard non polar33892256
Nordeoxycholic acid,2TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O)C12C3615.6Standard polar33892256
Nordeoxycholic acid,2TMS,isomer #2CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C)C12C3240.6Semi standard non polar33892256
Nordeoxycholic acid,2TMS,isomer #2CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C)C12C3114.3Standard non polar33892256
Nordeoxycholic acid,2TMS,isomer #2CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C)C12C3531.1Standard polar33892256
Nordeoxycholic acid,2TMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C)C12C3343.8Semi standard non polar33892256
Nordeoxycholic acid,2TMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C)C12C3025.3Standard non polar33892256
Nordeoxycholic acid,2TMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C)C12C3518.4Standard polar33892256
Nordeoxycholic acid,3TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C)C12C3200.9Semi standard non polar33892256
Nordeoxycholic acid,3TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C)C12C3092.0Standard non polar33892256
Nordeoxycholic acid,3TMS,isomer #1CC(CC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C)C12C3439.4Standard polar33892256
Nordeoxycholic acid,1TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O)C12C3554.5Semi standard non polar33892256
Nordeoxycholic acid,1TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O)C12C3382.1Standard non polar33892256
Nordeoxycholic acid,1TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O)C12C3779.7Standard polar33892256
Nordeoxycholic acid,1TBDMS,isomer #2CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O)C12C3594.6Semi standard non polar33892256
Nordeoxycholic acid,1TBDMS,isomer #2CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O)C12C3298.3Standard non polar33892256
Nordeoxycholic acid,1TBDMS,isomer #2CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O)C12C3776.2Standard polar33892256
Nordeoxycholic acid,1TBDMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3551.8Semi standard non polar33892256
Nordeoxycholic acid,1TBDMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3289.4Standard non polar33892256
Nordeoxycholic acid,1TBDMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3701.1Standard polar33892256
Nordeoxycholic acid,2TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O)C12C3785.7Semi standard non polar33892256
Nordeoxycholic acid,2TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O)C12C3653.3Standard non polar33892256
Nordeoxycholic acid,2TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O)C12C3832.8Standard polar33892256
Nordeoxycholic acid,2TBDMS,isomer #2CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3697.3Semi standard non polar33892256
Nordeoxycholic acid,2TBDMS,isomer #2CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3655.9Standard non polar33892256
Nordeoxycholic acid,2TBDMS,isomer #2CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3755.2Standard polar33892256
Nordeoxycholic acid,2TBDMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3769.3Semi standard non polar33892256
Nordeoxycholic acid,2TBDMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3549.0Standard non polar33892256
Nordeoxycholic acid,2TBDMS,isomer #3CC(CC(=O)O)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3746.6Standard polar33892256
Nordeoxycholic acid,3TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3878.8Semi standard non polar33892256
Nordeoxycholic acid,3TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3796.2Standard non polar33892256
Nordeoxycholic acid,3TBDMS,isomer #1CC(CC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(O[Si](C)(C)C(C)(C)C)CCC4(C)C3CC(O[Si](C)(C)C(C)(C)C)C12C3697.6Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Nordeoxycholic acid 10V, Positive-QTOFsplash10-03dl-0029000000-41c4db03dd0f20df9a9d2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Nordeoxycholic acid 20V, Positive-QTOFsplash10-0006-0159000000-2935d0999fde901552e62021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Nordeoxycholic acid 40V, Positive-QTOFsplash10-004m-7920000000-b354b751ec0744e25b382021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Nordeoxycholic acid 10V, Negative-QTOFsplash10-004i-0009000000-3ff32d8a84c808c9610a2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Nordeoxycholic acid 20V, Negative-QTOFsplash10-056r-0009000000-d5301a3e4d9929a329c32021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Nordeoxycholic acid 40V, Negative-QTOFsplash10-004i-2019000000-ecac88c96eb4683062b12021-10-22Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID278117
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound314374
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. National Institute of Environmental Health Science (NIEHS) [Link]