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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:38:35 UTC
Update Date2022-03-07 02:52:39 UTC
HMDB IDHMDB0030714
Secondary Accession Numbers
  • HMDB30714
Metabolite Identification
Common NameCycloneomammein
DescriptionCycloneomammein is found in fruits. Cycloneomammein is a constituent of seeds of Mammea americana (mamey) Beta-D-Glucose 6 phosphate (b-G6P) is the beta-anomer of glucose-6-phosphate. There are two anomers of glucose 6 phosphate, the alpha anomer and the beta anomer. Specifically, beta-D-Glucose 6-phosphate is glucose sugar phosphorylated on carbon 6. It is a very common metabolite in cells as the vast majority of glucose entering a cell will become phosphorylated in this way. The primary reason for the immediate phosphorylation of glucose is to prevent diffusion out of the cell. The phosphorylation adds a charged phosphate group so the glucose 6-phosphate cannot easily cross the cell membrane. b-G6P is involved in the glycolysis, gluconeogenesis, pentose phosphate, and glycogen and sucrose metabolic pathways [Kegg ID: C01172]. Beta-D-Glucose 6 phosphate can be generated through beta-D-fructose phosphate or alpha-D-glucose 6 phosphate (via glucose-6-phosphate isomerase) or beta-D glucose (via hexokinase). It can then be sent off to the pentose phosphate pathway which generates the useful cofactor NADPH as well as ribulose 5-phosphate, a carbon source for the synthesis of other molecules. Alternately if the cell needs energy or carbon skeletons for synthesis then glucose 6-phosphate is targeted for glycolysis. A third route is to have glucose 6 phosphate stored or converted to glycogen, especially if blood glucose levels are high
Structure
Data?1563862026
Synonyms
ValueSource
2,3-Dihydro-4-hydroxy-2-(1-hydroxy-1-methylethyl)-5-(2-methyl-1-oxobutyl)-9-propyl-7H-furo[2,3-F][1]benzopyran-7-one, 9ciHMDB
Mammea b/bb cyclo FHMDB
Chemical FormulaC22H28O6
Average Molecular Weight388.4541
Monoisotopic Molecular Weight388.188588628
IUPAC Name4-hydroxy-2-(2-hydroxypropan-2-yl)-5-(2-methylbutanoyl)-9-propyl-2H,3H,7H-furo[2,3-f]chromen-7-one
Traditional Name4-hydroxy-2-(2-hydroxypropan-2-yl)-5-(2-methylbutanoyl)-9-propyl-2H,3H-furo[2,3-f]chromen-7-one
CAS Registry Number30390-04-6
SMILES
CCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O)=C3CC(OC3=C12)C(C)(C)O
InChI Identifier
InChI=1S/C22H28O6/c1-6-8-12-9-15(23)28-21-16(12)20-13(10-14(27-20)22(4,5)26)19(25)17(21)18(24)11(3)7-2/h9,11,14,25-26H,6-8,10H2,1-5H3
InChI KeyYVCSPVUIXKMOLW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as angular furanocoumarins. These are furanocoumarins, with a structure characterized by a furan ring angularly fused to a coumarin.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCoumarins and derivatives
Sub ClassFuranocoumarins
Direct ParentAngular furanocoumarins
Alternative Parents
Substituents
  • Angular furanocoumarin
  • Butyrophenone
  • Benzopyran
  • 1-benzopyran
  • Coumaran
  • Aryl alkyl ketone
  • Aryl ketone
  • Alkyl aryl ether
  • Pyranone
  • Benzenoid
  • Pyran
  • Heteroaromatic compound
  • Vinylogous acid
  • Tertiary alcohol
  • Ketone
  • Lactone
  • Oxacycle
  • Ether
  • Organoheterocyclic compound
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organic oxide
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point130 - 131 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility3.83 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP-3.643Not Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.021 g/LALOGPS
logP3.85ALOGPS
logP4.51ChemAxon
logS-4.3ALOGPS
pKa (Strongest Acidic)8.75ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area93.06 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity106.01 m³·mol⁻¹ChemAxon
Polarizability42.5 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+190.36331661259
DarkChem[M-H]-189.20831661259
DeepCCS[M-2H]-231.72930932474
DeepCCS[M+Na]+206.81430932474
AllCCS[M+H]+192.032859911
AllCCS[M+H-H2O]+189.432859911
AllCCS[M+NH4]+194.432859911
AllCCS[M+Na]+195.132859911
AllCCS[M-H]-199.232859911
AllCCS[M+Na-2H]-199.832859911
AllCCS[M+HCOO]-200.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
CycloneomammeinCCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O)=C3CC(OC3=C12)C(C)(C)O3501.2Standard polar33892256
CycloneomammeinCCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O)=C3CC(OC3=C12)C(C)(C)O2956.8Standard non polar33892256
CycloneomammeinCCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O)=C3CC(OC3=C12)C(C)(C)O3004.5Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cycloneomammein,1TMS,isomer #1CCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O[Si](C)(C)C)=C3CC(C(C)(C)O)OC3=C122941.5Semi standard non polar33892256
Cycloneomammein,1TMS,isomer #2CCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O)=C3CC(C(C)(C)O[Si](C)(C)C)OC3=C122965.2Semi standard non polar33892256
Cycloneomammein,2TMS,isomer #1CCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O[Si](C)(C)C)=C3CC(C(C)(C)O[Si](C)(C)C)OC3=C122989.0Semi standard non polar33892256
Cycloneomammein,1TBDMS,isomer #1CCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O[Si](C)(C)C(C)(C)C)=C3CC(C(C)(C)O)OC3=C123156.8Semi standard non polar33892256
Cycloneomammein,1TBDMS,isomer #2CCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O)=C3CC(C(C)(C)O[Si](C)(C)C(C)(C)C)OC3=C123197.9Semi standard non polar33892256
Cycloneomammein,2TBDMS,isomer #1CCCC1=CC(=O)OC2=C(C(=O)C(C)CC)C(O[Si](C)(C)C(C)(C)C)=C3CC(C(C)(C)O[Si](C)(C)C(C)(C)C)OC3=C123427.6Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Cycloneomammein GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4i-9228000000-b0f4465b5b6329750a1a2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cycloneomammein GC-MS (2 TMS) - 70eV, Positivesplash10-00o0-6800490000-94b19cf7066e96321ebe2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cycloneomammein GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Cycloneomammein GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 10V, Positive-QTOFsplash10-0079-1009000000-cb80a9aa6fc0f253d49f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 20V, Positive-QTOFsplash10-0079-3009000000-5d454b9f80ba851473202016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 40V, Positive-QTOFsplash10-0a4i-9080000000-19bd257e61a2ad1ebc3b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 10V, Negative-QTOFsplash10-000i-0009000000-54bb058b7f501ab4befa2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 20V, Negative-QTOFsplash10-0f79-3049000000-68c5f429f5cd7de37f492016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 40V, Negative-QTOFsplash10-052r-4192000000-731669f44056ae53f2542016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 10V, Negative-QTOFsplash10-000i-0009000000-7f16ac45973a6479b3e52021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 20V, Negative-QTOFsplash10-000i-0009000000-0a1f91f826f0d3fc804f2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 40V, Negative-QTOFsplash10-0f79-0179000000-a4847e68e0da8e63b08e2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 10V, Positive-QTOFsplash10-000i-0009000000-9b33ebe7be1d64327f3b2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 20V, Positive-QTOFsplash10-000i-0009000000-a50c24e8a20e94c8c2642021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Cycloneomammein 40V, Positive-QTOFsplash10-0zfu-3179000000-3e7f29d47e205cd5fd212021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002636
KNApSAcK IDC00054440
Chemspider ID35013258
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound90472430
PDB IDNot Available
ChEBI ID175943
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1822161
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

Enzymes

General function:
Involved in transferase activity, transferring hexosyl groups
Specific function:
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isoform glucuronidates bilirubin IX-alpha to form both the IX-alpha-C8 and IX-alpha-C12 monoconjugates and diconjugate. Is also able to catalyze the glucuronidation of 17beta-estradiol, 17alpha-ethinylestradiol, 1-hydroxypyrene, 4-methylumbelliferone, 1-naphthol, paranitrophenol, scopoletin, and umbelliferone.
Gene Name:
UGT1A1
Uniprot ID:
P22309
Molecular weight:
59590.91
Reactions
Cycloneomammein → 3,4,5-trihydroxy-6-{[2-(2-hydroxypropan-2-yl)-5-(2-methylbutanoyl)-7-oxo-9-propyl-2H,3H,7H-furo[2,3-f]chromen-4-yl]oxy}oxane-2-carboxylic aciddetails