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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:44:46 UTC
Update Date2022-03-07 02:53:04 UTC
HMDB IDHMDB0031674
Secondary Accession Numbers
  • HMDB31674
Metabolite Identification
Common NameArmillarinin
DescriptionArmillarinin belongs to the class of organic compounds known as melleolides and analogues. Melleolides and analogues are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety. Based on a literature review a small amount of articles have been published on Armillarinin.
Structure
Thumb
Synonyms
ValueSource
3-Formyl-2a,4a-dihydroxy-6,6,7b-trimethyl-1H,2H,2ah,4ah,5H,6H,7H,7ah,7BH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoic acidHMDB
ArmillarininMeSH
Chemical FormulaC24H29ClO7
Average Molecular Weight464.936
Monoisotopic Molecular Weight464.160180989
IUPAC Name3-formyl-2a,4a-dihydroxy-6,6,7b-trimethyl-1H,2H,2aH,4aH,5H,6H,7H,7aH,7bH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
Traditional Name3-formyl-2a,4a-dihydroxy-6,6,7b-trimethyl-1H,2H,5H,7H,7aH-cyclobuta[e]inden-2-yl 3-chloro-6-hydroxy-4-methoxy-2-methylbenzoate
CAS Registry Number127486-63-9
SMILES
COC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C1
InChI Identifier
InChI=1S/C24H29ClO7/c1-12-18(14(27)6-15(31-5)19(12)25)20(28)32-17-9-22(4)16-8-21(2,3)11-23(16,29)7-13(10-26)24(17,22)30/h6-7,10,16-17,27,29-30H,8-9,11H2,1-5H3
InChI KeyXOGUZUVXPLTDMB-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as melleolides and analogues. Melleolides and analogues are compounds with a structure characterized by the presence of a 2-hydroxy-4-methoxy-6-methylbenzoic acid derivative linked to a 3,6,6,7b-tetramethyl-cyclobuta[e]indene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentMelleolides and analogues
Alternative Parents
Substituents
  • Melleolide-skeleton
  • P-methoxybenzoic acid or derivatives
  • O-hydroxybenzoic acid ester
  • Salicylic acid or derivatives
  • Methoxyphenol
  • 3-halobenzoic acid or derivatives
  • Halobenzoic acid or derivatives
  • Benzoate ester
  • Benzoic acid or derivatives
  • Anisole
  • Phenoxy compound
  • 4-chlorophenol
  • M-cresol
  • 4-halophenol
  • Methoxybenzene
  • Benzoyl
  • Phenol ether
  • Alkyl aryl ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Chlorobenzene
  • Halobenzene
  • Toluene
  • Phenol
  • Aryl chloride
  • Benzenoid
  • Aryl halide
  • Monocyclic benzene moiety
  • Tertiary alcohol
  • Vinylogous acid
  • Cyclic alcohol
  • Carboxylic acid ester
  • Cyclobutanol
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Ether
  • Alcohol
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Aldehyde
  • Organooxygen compound
  • Organohalogen compound
  • Organochloride
  • Aromatic homopolycyclic compound
Molecular FrameworkAromatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point152 - 155 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility1 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0081 g/LALOGPS
logP2.95ALOGPS
logP3.78ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)9.33ChemAxon
pKa (Strongest Basic)-3.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area113.29 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity118.78 m³·mol⁻¹ChemAxon
Polarizability48.09 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-241.21530932474
DeepCCS[M+Na]+216.6430932474
AllCCS[M+H]+206.032859911
AllCCS[M+H-H2O]+204.232859911
AllCCS[M+NH4]+207.832859911
AllCCS[M+Na]+208.232859911
AllCCS[M-H]-208.732859911
AllCCS[M+Na-2H]-209.532859911
AllCCS[M+HCOO]-210.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ArmillarininCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C14580.3Standard polar33892256
ArmillarininCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C13151.9Standard non polar33892256
ArmillarininCOC1=C(Cl)C(C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O)C(O)=C13314.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Armillarinin,1TMS,isomer #1COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3516.3Semi standard non polar33892256
Armillarinin,1TMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3522.8Semi standard non polar33892256
Armillarinin,1TMS,isomer #3COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl3556.3Semi standard non polar33892256
Armillarinin,2TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3449.3Semi standard non polar33892256
Armillarinin,2TMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3434.5Semi standard non polar33892256
Armillarinin,2TMS,isomer #3COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3464.7Semi standard non polar33892256
Armillarinin,3TMS,isomer #1COC1=CC(O[Si](C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C)C=C(C=O)C23O[Si](C)(C)C)C(C)=C1Cl3419.2Semi standard non polar33892256
Armillarinin,1TBDMS,isomer #1COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3747.9Semi standard non polar33892256
Armillarinin,1TBDMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl3767.5Semi standard non polar33892256
Armillarinin,1TBDMS,isomer #3COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O)C(C)=C1Cl3782.8Semi standard non polar33892256
Armillarinin,2TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O)C(C)=C1Cl3890.1Semi standard non polar33892256
Armillarinin,2TBDMS,isomer #2COC1=CC(O)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl3886.8Semi standard non polar33892256
Armillarinin,2TBDMS,isomer #3COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl3906.1Semi standard non polar33892256
Armillarinin,3TBDMS,isomer #1COC1=CC(O[Si](C)(C)C(C)(C)C)=C(C(=O)OC2CC3(C)C4CC(C)(C)CC4(O[Si](C)(C)C(C)(C)C)C=C(C=O)C23O[Si](C)(C)C(C)(C)C)C(C)=C1Cl4044.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Armillarinin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0r6s-4970100000-7fa0d5bbf44e03a3f3af2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Armillarinin GC-MS (3 TMS) - 70eV, Positivesplash10-0gbi-5119004000-31eaebbf47bda85ee6072017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Armillarinin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 10V, Positive-QTOFsplash10-0002-0230900000-4c1dffdb423660ade8882016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 20V, Positive-QTOFsplash10-0002-0890800000-fe9bf9ff0dd1ba932eb72016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 40V, Positive-QTOFsplash10-00kb-1940000000-1783990c79fb3714fec62016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 10V, Negative-QTOFsplash10-03di-0130900000-7057abd7ca59a4de7b1c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 20V, Negative-QTOFsplash10-02ft-0770900000-2a4637e905c4b0674be12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 40V, Negative-QTOFsplash10-00di-0930000000-cc25308848cfaf1facfb2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 10V, Negative-QTOFsplash10-03di-0000900000-73f0f4f85a6e4466716b2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 20V, Negative-QTOFsplash10-0229-0650900000-a3ea83f08ff53f7680412021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 40V, Negative-QTOFsplash10-0a5a-9810300000-a664822af06e5386a3452021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 10V, Positive-QTOFsplash10-014j-0260900000-551e1b69670bce2ced932021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 20V, Positive-QTOFsplash10-0002-4950100000-367c85a04117fa5e02b52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Armillarinin 40V, Positive-QTOFsplash10-0002-9460000000-fa55c1d3fd20d0c1dc6d2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB008334
KNApSAcK IDC00054382
Chemspider ID19994085
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21126387
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1827401
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.