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Showing metabocard for 1,1-Dimethoxynonane (HMDB0034151)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:56:48 UTC
Update Date2023-02-21 17:23:55 UTC
HMDB IDHMDB0034151
Secondary Accession Numbers
  • HMDB34151
Metabolite Identification
Common Name1,1-Dimethoxynonane
Description1,1-Dimethoxynonane belongs to the class of organic compounds known as acetals. Acetals are compounds having the structure R2C(OR')2 ( R' not Hydrogen) and thus diethers of geminal diols. Originally, the term was confined to derivatives of aldehydes (one R = H), but it now applies equally to derivatives of ketones (neither R = H ). Mixed acetals have different R' groups. 1,1-Dimethoxynonane is a citrus, floral, and fresh tasting compound. 1,1-Dimethoxynonane has been detected, but not quantified in, blackberries (Rubus) and evergreen blackberries (Rubus laciniatus). This could make 1,1-dimethoxynonane a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on 1,1-Dimethoxynonane.
Structure
Data?1677000235
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0034151 (1,1-Dimethoxynonane)


  Mrv0541 05061307372D          

 13 12  0  0  0  0            999 V2000
    0.6430   -4.4293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5786   -6.1454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1823   -4.7725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -5.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0301   -4.7725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6246   -5.3445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4172   -5.1157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0117   -5.6877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8044   -5.4589    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3988   -6.0310    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1915   -5.8021    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7859   -6.3742    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3896   -5.0013    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  4  1  1  0  0  0  0
  5  4  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  1  0  0  0  0
  9  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11 10  1  0  0  0  0
 12  2  1  0  0  0  0
 12 11  1  0  0  0  0
 13  3  1  0  0  0  0
 13 11  1  0  0  0  0
M  END
Download

3D MOL for HMDB0034151 (1,1-Dimethoxynonane)

HMDB0034151
     RDKit          3D
1,1-Dimethoxynonane
 37 36  0  0  0  0  0  0  0  0999 V2000
    5.3959   -0.4976   -0.2715 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2573   -0.3689    0.7082 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9241   -0.3687   -0.0324 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7815   -0.2427    0.9092 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4058   -0.2572    0.2262 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2749    0.8450   -0.7145 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9067    1.1105   -1.5127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2204    1.4200   -0.9885 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8965    0.3619   -0.1626 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0936   -0.8164   -0.8720 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8093   -1.9713   -0.1992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2505    0.7937    0.0925 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4672    0.8129    1.4390 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3155   -0.8928    0.1972 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0807   -1.2796   -1.0182 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5771    0.4404   -0.8402 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2711   -1.2987    1.3343 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3427    0.4779    1.3904 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9445    0.5422   -0.6976 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8114   -1.2651   -0.6577 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8486   -1.0333    1.6675 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8825    0.7276    1.4791 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3036   -0.3877    1.0333 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4167   -1.2674   -0.2994 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6167    1.8047   -0.1951 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1342    0.7147   -1.4650 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6117    1.9420   -2.2523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0480    0.2577   -2.2761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9328    1.5735   -1.8715 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3105    2.4339   -0.4952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4996    0.1790    0.8215 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4677   -2.0381    0.7165 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7712   -2.0964    0.1434 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0250   -2.8837   -0.8348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7653    1.5107    1.9626 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4070   -0.1917    1.8908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4947    1.2091    1.6449 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
  9 12  1  0
 12 13  1  0
  1 14  1  0
  1 15  1  0
  1 16  1  0
  2 17  1  0
  2 18  1  0
  3 19  1  0
  3 20  1  0
  4 21  1  0
  4 22  1  0
  5 23  1  0
  5 24  1  0
  6 25  1  0
  6 26  1  0
  7 27  1  0
  7 28  1  0
  8 29  1  0
  8 30  1  0
  9 31  1  0
 11 32  1  0
 11 33  1  0
 11 34  1  0
 13 35  1  0
 13 36  1  0
 13 37  1  0
M  END
Download

3D SDF for HMDB0034151 (1,1-Dimethoxynonane)


  Mrv0541 05061307372D          

 13 12  0  0  0  0            999 V2000
    0.6430   -4.4293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5786   -6.1454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1823   -4.7725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -5.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0301   -4.7725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6246   -5.3445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4172   -5.1157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0117   -5.6877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8044   -5.4589    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3988   -6.0310    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1915   -5.8021    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7859   -6.3742    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3896   -5.0013    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  4  1  1  0  0  0  0
  5  4  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  1  0  0  0  0
  9  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11 10  1  0  0  0  0
 12  2  1  0  0  0  0
 12 11  1  0  0  0  0
 13  3  1  0  0  0  0
 13 11  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0034151

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCCCCCC(OC)OC

> <INCHI_IDENTIFIER>
InChI=1S/C11H24O2/c1-4-5-6-7-8-9-10-11(12-2)13-3/h11H,4-10H2,1-3H3

> <INCHI_KEY>
LYLVOCPDQAOQKL-UHFFFAOYSA-N

> <FORMULA>
C11H24O2

> <MOLECULAR_WEIGHT>
188.3071

> <EXACT_MASS>
188.177630012

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_AVERAGE_POLARIZABILITY>
24.431588809318885

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
1,1-dimethoxynonane

> <ALOGPS_LOGP>
3.53

> <JCHEM_LOGP>
3.721492870666666

> <ALOGPS_LOGS>
-3.83

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-3.993946512514199

> <JCHEM_POLAR_SURFACE_AREA>
18.46

> <JCHEM_REFRACTIVITY>
55.7826

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.80e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1,1-dimethoxynonane

> <JCHEM_VEBER_RULE>
1

$$$$
Download

3D-SDF for HMDB0034151 (1,1-Dimethoxynonane)

HMDB0034151
     RDKit          3D
1,1-Dimethoxynonane
 37 36  0  0  0  0  0  0  0  0999 V2000
    5.3959   -0.4976   -0.2715 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2573   -0.3689    0.7082 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9241   -0.3687   -0.0324 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7815   -0.2427    0.9092 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4058   -0.2572    0.2262 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2749    0.8450   -0.7145 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9067    1.1105   -1.5127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2204    1.4200   -0.9885 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8965    0.3619   -0.1626 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0936   -0.8164   -0.8720 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8093   -1.9713   -0.1992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2505    0.7937    0.0925 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4672    0.8129    1.4390 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3155   -0.8928    0.1972 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0807   -1.2796   -1.0182 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5771    0.4404   -0.8402 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2711   -1.2987    1.3343 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3427    0.4779    1.3904 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9445    0.5422   -0.6976 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8114   -1.2651   -0.6577 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8486   -1.0333    1.6675 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8825    0.7276    1.4791 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3036   -0.3877    1.0333 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4167   -1.2674   -0.2994 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6167    1.8047   -0.1951 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1342    0.7147   -1.4650 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6117    1.9420   -2.2523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0480    0.2577   -2.2761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9328    1.5735   -1.8715 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3105    2.4339   -0.4952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4996    0.1790    0.8215 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4677   -2.0381    0.7165 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7712   -2.0964    0.1434 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0250   -2.8837   -0.8348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7653    1.5107    1.9626 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4070   -0.1917    1.8908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4947    1.2091    1.6449 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
  9 12  1  0
 12 13  1  0
  1 14  1  0
  1 15  1  0
  1 16  1  0
  2 17  1  0
  2 18  1  0
  3 19  1  0
  3 20  1  0
  4 21  1  0
  4 22  1  0
  5 23  1  0
  5 24  1  0
  6 25  1  0
  6 26  1  0
  7 27  1  0
  7 28  1  0
  8 29  1  0
  8 30  1  0
  9 31  1  0
 11 32  1  0
 11 33  1  0
 11 34  1  0
 13 35  1  0
 13 36  1  0
 13 37  1  0
M  END
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PDB for HMDB0034151 (1,1-Dimethoxynonane)

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0       1.200  -8.268   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      14.147 -11.471   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      13.407  -8.909   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.310  -9.336   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.790  -8.909   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.899  -9.976   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.379  -9.549   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       7.489 -10.617   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.968 -10.190   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.078 -11.258   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      11.557 -10.831   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      12.667 -11.899   0.000  0.00  0.00           O+0
HETATM   13  O   UNK     0      11.927  -9.336   0.000  0.00  0.00           O+0
CONECT    1    4                                                            
CONECT    2   12                                                            
CONECT    3   13                                                            
CONECT    4    1    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12    2   11                                                       
CONECT   13    3   11                                                       
MASTER        0    0    0    0    0    0    0    0   13    0   24    0
END
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3D PDB for HMDB0034151 (1,1-Dimethoxynonane)

COMPND    HMDB0034151
HETATM    1  C1  UNL     1       5.396  -0.498  -0.271  1.00  0.00           C  
HETATM    2  C2  UNL     1       4.257  -0.369   0.708  1.00  0.00           C  
HETATM    3  C3  UNL     1       2.924  -0.369  -0.032  1.00  0.00           C  
HETATM    4  C4  UNL     1       1.781  -0.243   0.909  1.00  0.00           C  
HETATM    5  C5  UNL     1       0.406  -0.257   0.226  1.00  0.00           C  
HETATM    6  C6  UNL     1       0.275   0.845  -0.715  1.00  0.00           C  
HETATM    7  C7  UNL     1      -0.907   1.110  -1.513  1.00  0.00           C  
HETATM    8  C8  UNL     1      -2.220   1.420  -0.989  1.00  0.00           C  
HETATM    9  C9  UNL     1      -2.896   0.362  -0.163  1.00  0.00           C  
HETATM   10  O1  UNL     1      -3.094  -0.816  -0.872  1.00  0.00           O  
HETATM   11  C10 UNL     1      -2.809  -1.971  -0.199  1.00  0.00           C  
HETATM   12  O2  UNL     1      -4.251   0.794   0.093  1.00  0.00           O  
HETATM   13  C11 UNL     1      -4.467   0.813   1.439  1.00  0.00           C  
HETATM   14  H1  UNL     1       6.315  -0.893   0.197  1.00  0.00           H  
HETATM   15  H2  UNL     1       5.081  -1.280  -1.018  1.00  0.00           H  
HETATM   16  H3  UNL     1       5.577   0.440  -0.840  1.00  0.00           H  
HETATM   17  H4  UNL     1       4.271  -1.299   1.334  1.00  0.00           H  
HETATM   18  H5  UNL     1       4.343   0.478   1.390  1.00  0.00           H  
HETATM   19  H6  UNL     1       2.945   0.542  -0.698  1.00  0.00           H  
HETATM   20  H7  UNL     1       2.811  -1.265  -0.658  1.00  0.00           H  
HETATM   21  H8  UNL     1       1.849  -1.033   1.668  1.00  0.00           H  
HETATM   22  H9  UNL     1       1.882   0.728   1.479  1.00  0.00           H  
HETATM   23  H10 UNL     1      -0.304  -0.388   1.033  1.00  0.00           H  
HETATM   24  H11 UNL     1       0.417  -1.267  -0.299  1.00  0.00           H  
HETATM   25  H12 UNL     1       0.617   1.805  -0.195  1.00  0.00           H  
HETATM   26  H13 UNL     1       1.134   0.715  -1.465  1.00  0.00           H  
HETATM   27  H14 UNL     1      -0.612   1.942  -2.252  1.00  0.00           H  
HETATM   28  H15 UNL     1      -1.048   0.258  -2.276  1.00  0.00           H  
HETATM   29  H16 UNL     1      -2.933   1.574  -1.871  1.00  0.00           H  
HETATM   30  H17 UNL     1      -2.310   2.434  -0.495  1.00  0.00           H  
HETATM   31  H18 UNL     1      -2.500   0.179   0.822  1.00  0.00           H  
HETATM   32  H19 UNL     1      -3.468  -2.038   0.716  1.00  0.00           H  
HETATM   33  H20 UNL     1      -1.771  -2.096   0.143  1.00  0.00           H  
HETATM   34  H21 UNL     1      -3.025  -2.884  -0.835  1.00  0.00           H  
HETATM   35  H22 UNL     1      -3.765   1.511   1.963  1.00  0.00           H  
HETATM   36  H23 UNL     1      -4.407  -0.192   1.891  1.00  0.00           H  
HETATM   37  H24 UNL     1      -5.495   1.209   1.645  1.00  0.00           H  
CONECT    1    2   14   15   16
CONECT    2    3   17   18
CONECT    3    4   19   20
CONECT    4    5   21   22
CONECT    5    6   23   24
CONECT    6    7   25   26
CONECT    7    8   27   28
CONECT    8    9   29   30
CONECT    9   10   12   31
CONECT   10   11
CONECT   11   32   33   34
CONECT   12   13
CONECT   13   35   36   37
END
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SMILES for HMDB0034151 (1,1-Dimethoxynonane)

CCCCCCCCC(OC)OC
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INCHI for HMDB0034151 (1,1-Dimethoxynonane)

InChI=1S/C11H24O2/c1-4-5-6-7-8-9-10-11(12-2)13-3/h11H,4-10H2,1-3H3
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View in JSmolView Stereo Labels
Synonyms
ValueSource
1,1-Dimethoxy-nonaneHMDB
1,1-Dimethoxynonane, 9ciHMDB
N-Nonanal dimethyl acetalHMDB
Nonanal dimethyl acetalHMDB
Chemical FormulaC11H24O2
Average Molecular Weight188.3071
Monoisotopic Molecular Weight188.177630012
IUPAC Name1,1-dimethoxynonane
Traditional Name1,1-dimethoxynonane
CAS Registry Number18824-63-0
SMILES
CCCCCCCCC(OC)OC
InChI Identifier
InChI=1S/C11H24O2/c1-4-5-6-7-8-9-10-11(12-2)13-3/h11H,4-10H2,1-3H3
InChI KeyLYLVOCPDQAOQKL-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as acetals. Acetals are compounds having the structure R2C(OR')2 ( R' not Hydrogen) and thus diethers of geminal diols. Originally, the term was confined to derivatives of aldehydes (one R = H), but it now applies equally to derivatives of ketones (neither R = H ). Mixed acetals have different R' groups.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassEthers
Direct ParentAcetals
Alternative Parents
Substituents
  • Acetal
  • Hydrocarbon derivative
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Organoleptic effect
Disposition
Biological locationSource
Process
Naturally occurring process
Role
Biological roleIndustrial application
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point62.00 °C. @ 15.00 mm HgThe Good Scents Company Information System
Water Solubility37.5 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP3.569 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.028 g/LALOGPS
logP3.53ALOGPS
logP3.72ChemAxon
logS-3.8ALOGPS
pKa (Strongest Basic)-4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area18.46 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity55.78 m³·mol⁻¹ChemAxon
Polarizability24.43 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+147.17531661259
DarkChem[M-H]-144.82631661259
DeepCCS[M+H]+147.91630932474
DeepCCS[M-H]-144.11530932474
DeepCCS[M-2H]-181.52430932474
DeepCCS[M+Na]+156.85730932474
AllCCS[M+H]+150.932859911
AllCCS[M+H-H2O]+147.132859911
AllCCS[M+NH4]+154.332859911
AllCCS[M+Na]+155.332859911
AllCCS[M-H]-150.832859911
AllCCS[M+Na-2H]-152.532859911
AllCCS[M+HCOO]-154.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
1,1-DimethoxynonaneCCCCCCCCC(OC)OC1464.2Standard polar33892256
1,1-DimethoxynonaneCCCCCCCCC(OC)OC1253.1Standard non polar33892256
1,1-DimethoxynonaneCCCCCCCCC(OC)OC1239.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental GC-MSGC-MS Spectrum - 1,1-Dimethoxynonane EI-B (Non-derivatized)splash10-004i-9000000000-323f734751d631abb1c22017-09-12HMDB team, MONA, MassBankView Spectrum
Experimental GC-MSGC-MS Spectrum - 1,1-Dimethoxynonane EI-B (Non-derivatized)splash10-004i-9000000000-323f734751d631abb1c22018-05-18HMDB team, MONA, MassBankView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 1,1-Dimethoxynonane GC-MS (Non-derivatized) - 70eV, Positivesplash10-004i-9300000000-a18dd82def50624a3db52017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 1,1-Dimethoxynonane GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 10V, Positive-QTOFsplash10-000i-1900000000-02f5e7a37f7f00a104062015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 20V, Positive-QTOFsplash10-000i-5900000000-59677eadb08791b698d22015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 40V, Positive-QTOFsplash10-052f-9100000000-3c96aeaef9d526c99fe02015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 10V, Negative-QTOFsplash10-000i-0900000000-e7fb7b8154e1a394acc22015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 20V, Negative-QTOFsplash10-000i-1900000000-3afe1fd4ffd6b8b3a92a2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 40V, Negative-QTOFsplash10-0a6r-6900000000-15e9ef26b22002bc75852015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 10V, Negative-QTOFsplash10-000i-0900000000-6100f9db6399f061ed112021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 20V, Negative-QTOFsplash10-08g0-0900000000-5620b6ae6d308ea069c62021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 40V, Negative-QTOFsplash10-05fr-9400000000-58e0e140145165b9844f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 10V, Positive-QTOFsplash10-0c09-9500000000-1faa9d05a748cac3cbec2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 20V, Positive-QTOFsplash10-0abl-9000000000-e1f1dce5832e899a04532021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,1-Dimethoxynonane 40V, Positive-QTOFsplash10-0a4l-9000000000-d7c91b452b6e95af60552021-09-22Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012433
KNApSAcK IDNot Available
Chemspider ID79223
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound87813
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1017811
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .