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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 19:09:58 UTC
Update Date2022-03-07 02:54:04 UTC
HMDB IDHMDB0034349
Secondary Accession Numbers
  • HMDB34349
Metabolite Identification
Common NameSuillin
DescriptionSuillin belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Based on a literature review a significant number of articles have been published on Suillin.
Structure
Data?1563862549
Synonyms
ValueSource
4-Acetoxy-3-geranylgeranyl-1,2-dihydroxybenzeneHMDB
3,4-Dihydroxy-2-[(2Z,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]phenyl acetic acidGenerator
SuillinMeSH
Chemical FormulaC28H40O4
Average Molecular Weight440.6148
Monoisotopic Molecular Weight440.292659768
IUPAC Name3,4-dihydroxy-2-[(2Z,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]phenyl acetate
Traditional Name3,4-dihydroxy-2-[(2Z,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]phenyl acetate
CAS Registry Number103538-03-0
SMILES
CC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC1=C(OC(C)=O)C=CC(O)=C1O
InChI Identifier
InChI=1S/C28H40O4/c1-20(2)10-7-11-21(3)12-8-13-22(4)14-9-15-23(5)16-17-25-27(32-24(6)29)19-18-26(30)28(25)31/h10,12,14,16,18-19,30-31H,7-9,11,13,15,17H2,1-6H3/b21-12+,22-14+,23-16-
InChI KeyTVYGOMSIBBSIKO-DCVNSYBLSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Diterpenoid
  • Phenol ester
  • Phenoxy compound
  • Catechol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organic oxygen compound
  • Organooxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point108 °CNot Available
Boiling Point584.00 to 585.00 °C. @ 760.00 mm Hg (est)The Good Scents Company Information System
Water Solubility2.4e-05 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP7.983 (est)The Good Scents Company Information System
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0014 g/LALOGPS
logP7.42ALOGPS
logP7.68ChemAxon
logS-5.5ALOGPS
pKa (Strongest Acidic)8.82ChemAxon
pKa (Strongest Basic)-6.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area66.76 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity136.8 m³·mol⁻¹ChemAxon
Polarizability52.76 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+209.64130932474
DeepCCS[M-H]-207.28330932474
DeepCCS[M-2H]-241.18830932474
DeepCCS[M+Na]+217.19630932474
AllCCS[M+H]+217.732859911
AllCCS[M+H-H2O]+215.532859911
AllCCS[M+NH4]+219.832859911
AllCCS[M+Na]+220.432859911
AllCCS[M-H]-207.832859911
AllCCS[M+Na-2H]-209.432859911
AllCCS[M+HCOO]-211.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
SuillinCC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC1=C(OC(C)=O)C=CC(O)=C1O4610.4Standard polar33892256
SuillinCC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC1=C(OC(C)=O)C=CC(O)=C1O3154.4Standard non polar33892256
SuillinCC(C)=CCC\C(C)=C\CC\C(C)=C\CC\C(C)=C/CC1=C(OC(C)=O)C=CC(O)=C1O3336.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Suillin,1TMS,isomer #1CC(=O)OC1=CC=C(O[Si](C)(C)C)C(O)=C1C/C=C(/C)CC/C=C(\C)CC/C=C(\C)CCC=C(C)C3218.7Semi standard non polar33892256
Suillin,1TMS,isomer #2CC(=O)OC1=CC=C(O)C(O[Si](C)(C)C)=C1C/C=C(/C)CC/C=C(\C)CC/C=C(\C)CCC=C(C)C3235.2Semi standard non polar33892256
Suillin,2TMS,isomer #1CC(=O)OC1=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C1C/C=C(/C)CC/C=C(\C)CC/C=C(\C)CCC=C(C)C3237.2Semi standard non polar33892256
Suillin,1TBDMS,isomer #1CC(=O)OC1=CC=C(O[Si](C)(C)C(C)(C)C)C(O)=C1C/C=C(/C)CC/C=C(\C)CC/C=C(\C)CCC=C(C)C3435.9Semi standard non polar33892256
Suillin,1TBDMS,isomer #2CC(=O)OC1=CC=C(O)C(O[Si](C)(C)C(C)(C)C)=C1C/C=C(/C)CC/C=C(\C)CC/C=C(\C)CCC=C(C)C3441.7Semi standard non polar33892256
Suillin,2TBDMS,isomer #1CC(=O)OC1=CC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C1C/C=C(/C)CC/C=C(\C)CC/C=C(\C)CCC=C(C)C3619.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Suillin GC-MS (Non-derivatized) - 70eV, Positivesplash10-0694-8897500000-8626cda31c7e1a9c58b42017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Suillin GC-MS (2 TMS) - 70eV, Positivesplash10-00or-3112290000-a2d720f7ec4cdcd57b5d2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Suillin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Suillin GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 10V, Positive-QTOFsplash10-0007-0329600000-9d4fc767bfa1912fe52e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 20V, Positive-QTOFsplash10-053u-2976000000-235efde025cfa0a5019d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 40V, Positive-QTOFsplash10-0gb9-5694000000-cd935f8efe07756f6cd02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 10V, Negative-QTOFsplash10-000j-1006900000-829fe2715e3110d3ec712016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 20V, Negative-QTOFsplash10-000b-3109400000-4ce0284d035c99e67f012016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 40V, Negative-QTOFsplash10-0a5c-9318100000-14f0a2b6d265d36b0f2c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 10V, Positive-QTOFsplash10-0006-2029700000-2827fa3635048644ee172021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 20V, Positive-QTOFsplash10-0fai-3329000000-30e6102423e49ca37d2f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 40V, Positive-QTOFsplash10-0ac0-3911000000-8b68f65394a9758ad74f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 10V, Negative-QTOFsplash10-052r-7004900000-9c301e9d2e93c850d7fc2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 20V, Negative-QTOFsplash10-0a4i-9303200000-0ba993525d8e84e45bb52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Suillin 40V, Negative-QTOFsplash10-0a4i-9302000000-8aa2c98f46255d0ff0b22021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012710
KNApSAcK IDC00057747
Chemspider ID30777049
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751551
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1002731
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.