Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:06:45 UTC
Update Date2022-03-07 02:54:45 UTC
HMDB IDHMDB0036044
Secondary Accession Numbers
  • HMDB36044
Metabolite Identification
Common NameMarmelo oxide A
DescriptionMarmelo oxide A belongs to the class of organic compounds known as tetrahydrofurans. These are heterocyclic compounds containing a saturated, aliphatic, five-membered ring where a carbon is replaced by an oxygen. Marmelo oxide A has been detected, but not quantified in, fruits. This could make marmelo oxide a a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Marmelo oxide A.
Structure
Data?1563862812
SynonymsNot Available
Chemical FormulaC10H16O
Average Molecular Weight152.2334
Monoisotopic Molecular Weight152.120115134
IUPAC Name4-methyl-2-[(1Z)-3-methylbuta-1,3-dien-1-yl]oxolane
Traditional Name4-methyl-2-[(1Z)-3-methylbuta-1,3-dien-1-yl]oxolane
CAS Registry Number89103-55-9
SMILES
CC1COC(C1)\C=C/C(C)=C
InChI Identifier
InChI=1S/C10H16O/c1-8(2)4-5-10-6-9(3)7-11-10/h4-5,9-10H,1,6-7H2,2-3H3/b5-4-
InChI KeySULWOTZUSYCRIP-PLNGDYQASA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tetrahydrofurans. These are heterocyclic compounds containing a saturated, aliphatic, five-membered ring where a carbon is replaced by an oxygen.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassTetrahydrofurans
Sub ClassNot Available
Direct ParentTetrahydrofurans
Alternative Parents
Substituents
  • Tetrahydrofuran
  • Oxacycle
  • Ether
  • Dialkyl ether
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility85.4 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.23 g/LALOGPS
logP3.11ALOGPS
logP2.46ChemAxon
logS-2.8ALOGPS
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area9.23 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity48.46 m³·mol⁻¹ChemAxon
Polarizability18.22 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+134.54831661259
DarkChem[M-H]-134.13431661259
DeepCCS[M+H]+141.70330932474
DeepCCS[M-H]-137.87630932474
DeepCCS[M-2H]-175.31630932474
DeepCCS[M+Na]+150.84930932474
AllCCS[M+H]+132.632859911
AllCCS[M+H-H2O]+128.132859911
AllCCS[M+NH4]+136.732859911
AllCCS[M+Na]+138.032859911
AllCCS[M-H]-136.832859911
AllCCS[M+Na-2H]-138.332859911
AllCCS[M+HCOO]-140.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Marmelo oxide ACC1COC(C1)\C=C/C(C)=C1503.3Standard polar33892256
Marmelo oxide ACC1COC(C1)\C=C/C(C)=C1074.2Standard non polar33892256
Marmelo oxide ACC1COC(C1)\C=C/C(C)=C1136.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Marmelo oxide A GC-MS (Non-derivatized) - 70eV, Positivesplash10-004u-9300000000-b1bbc2c0c47eb9262f662017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Marmelo oxide A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 10V, Positive-QTOFsplash10-0udi-1900000000-d25b7ff889543da4e6f32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 20V, Positive-QTOFsplash10-0udi-9800000000-1791e2b9a0eab60843192016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 40V, Positive-QTOFsplash10-015c-9000000000-a2f5b5659dc4cc5a365e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 10V, Negative-QTOFsplash10-0udi-0900000000-f125c85f0eafbc68d24d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 20V, Negative-QTOFsplash10-0udi-3900000000-7e3bdfedea1b13d702fb2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 40V, Negative-QTOFsplash10-066r-9500000000-80fd14be420be347928d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 10V, Positive-QTOFsplash10-00mk-9100000000-0e5fde3a0a6fc61b56902021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 20V, Positive-QTOFsplash10-014l-9000000000-67786b7a68f328c7b38e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 40V, Positive-QTOFsplash10-0v0c-9000000000-edec084d12de24ffcb612021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 10V, Negative-QTOFsplash10-0udi-0900000000-2d0c3bebf9f66b4d98482021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 20V, Negative-QTOFsplash10-0uk9-2900000000-2b4080ce7aad1e2f0f582021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Marmelo oxide A 40V, Negative-QTOFsplash10-0fte-9100000000-61fb1b068fb31b3ca4882021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB014865
KNApSAcK IDNot Available
Chemspider ID35014078
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751905
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1583361
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .