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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 22:18:08 UTC

Update Date

2022-03-07 02:55:10 UTC

HMDB ID

HMDB0037059

Secondary Accession Numbers

HMDB37059

Metabolite Identification

Common Name

1alpha-Hydroxyarbusculin A

Description

1alpha-Hydroxyarbusculin A belongs to the class of organic compounds known as eudesmanolides, secoeudesmanolides, and derivatives. These are terpenoids with a structure based on the eudesmanolide (a 3,5a,9-trimethyl-naphtho[1,2-b]furan-2-one derivative) or secoeudesmanolide (a 3,6-dimethyl-5-(pentan-2-yl)-1-benzofuran-2-one derivative) skeleton. Based on a literature review a small amount of articles have been published on 1alpha-Hydroxyarbusculin A.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0037059
     RDKit          3D
1alpha-Hydroxyarbusculin A
 41 43  0  0  0  0  0  0  0  0999 V2000
    4.4321   -0.5177   -0.0707 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1753   -0.8629   -0.2643 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6419   -2.2183   -0.1312 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -3.2627    0.0853 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2384   -2.1446   -0.2866 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.8469    0.0841 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0109   -0.0547   -0.6444 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9668    1.3184   -0.1114 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7324    1.6706    0.6385 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5373    1.0859    0.0488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8830    2.0153   -1.1246 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6109    1.2682    1.0762 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9007    2.6472    1.1360 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8600    0.5266    0.8585 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8292   -0.5491   -0.1664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4916   -1.2441   -0.0497 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4274   -2.5070   -0.8577 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3183   -1.5588    1.2985 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3757   -0.3189   -0.4349 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7564    0.5165   -0.1890 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2071   -1.2122    0.2101 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0216   -0.6846    1.1737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8403   -0.1445   -1.7330 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8407    1.4828    0.5502 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1175    2.0328   -0.9715 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5983    2.7796    0.6304 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8175    1.3874    1.7054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2115    1.7999   -1.9936 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6800    3.0394   -0.7713 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9337    1.9436   -1.4042 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1686    1.0298    2.0811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2694    3.1245    1.7277 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7176    1.2150    0.6043 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1867    0.0505    1.8299 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0346   -0.2024   -1.1968 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6283   -1.2840    0.0722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8137   -2.3070   -1.7781 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8871   -3.3208   -0.3171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4113   -2.8678   -1.2001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1190   -2.5216    1.4415 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3433   -0.3033   -1.5558 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 16 19  1  0
  7  2  1  0
 19 10  1  0
 19  6  1  0
  1 20  1  0
  1 21  1  0
  6 22  1  0
  7 23  1  0
  8 24  1  0
  8 25  1  0
  9 26  1  0
  9 27  1  0
 11 28  1  0
 11 29  1  0
 11 30  1  0
 12 31  1  0
 13 32  1  0
 14 33  1  0
 14 34  1  0
 15 35  1  0
 15 36  1  0
 17 37  1  0
 17 38  1  0
 17 39  1  0
 18 40  1  0
 19 41  1  0
M  END


  Mrv0541 05061309322D          

 19 21  0  0  0  0            999 V2000
    4.2295    1.3982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7591    1.8407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8705   -0.6207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4083    1.7892    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1101    0.4383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5837    1.8150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2799   -0.2887    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5995    0.8656    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7983    1.0622    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3245    1.1395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3637    0.3610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5391    0.3867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6601    0.0428    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1491    1.1137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1045   -0.3145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0655    1.8665    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3613   -0.3918    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9359   -1.1221    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8963   -0.2691    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  6  4  1  0  0  0  0
  7  5  1  0  0  0  0
  8  1  2  0  0  0  0
  9  4  1  0  0  0  0
  9  8  1  0  0  0  0
 10  5  1  0  0  0  0
 11  9  1  0  0  0  0
 12 11  1  0  0  0  0
 13  8  1  0  0  0  0
 14  2  1  0  0  0  0
 14  6  1  0  0  0  0
 14 10  1  0  0  0  0
 14 12  1  0  0  0  0
 15  3  1  0  0  0  0
 15  7  1  0  0  0  0
 15 12  1  0  0  0  0
 16 10  1  0  0  0  0
 17 13  2  0  0  0  0
 18 15  1  0  0  0  0
 19 11  1  0  0  0  0
 19 13  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0037059

> <DATABASE_NAME>
hmdb

> <SMILES>
CC1(O)CCC(O)C2(C)CCC3C(OC(=O)C3=C)C12

> <INCHI_IDENTIFIER>
InChI=1S/C15H22O4/c1-8-9-4-6-14(2)10(16)5-7-15(3,18)12(14)11(9)19-13(8)17/h9-12,16,18H,1,4-7H2,2-3H3

> <INCHI_KEY>
LVABKRFKENTQBT-UHFFFAOYSA-N

> <FORMULA>
C15H22O4

> <MOLECULAR_WEIGHT>
266.3328

> <EXACT_MASS>
266.151809192

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
28.761786664332252

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
6,9-dihydroxy-5a,9-dimethyl-3-methylidene-dodecahydronaphtho[1,2-b]furan-2-one

> <ALOGPS_LOGP>
0.98

> <JCHEM_LOGP>
1.2011595679999998

> <ALOGPS_LOGS>
-1.60

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.998001757120857

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.383712460542522

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9348392548726885

> <JCHEM_POLAR_SURFACE_AREA>
66.76

> <JCHEM_REFRACTIVITY>
69.5187

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
6.68e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
6,9-dihydroxy-5a,9-dimethyl-3-methylidene-octahydronaphtho[1,2-b]furan-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0037059
     RDKit          3D
1alpha-Hydroxyarbusculin A
 41 43  0  0  0  0  0  0  0  0999 V2000
    4.4321   -0.5177   -0.0707 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1753   -0.8629   -0.2643 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6419   -2.2183   -0.1312 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -3.2627    0.0853 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2384   -2.1446   -0.2866 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.8469    0.0841 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0109   -0.0547   -0.6444 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9668    1.3184   -0.1114 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7324    1.6706    0.6385 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5373    1.0859    0.0488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8830    2.0153   -1.1246 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6109    1.2682    1.0762 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9007    2.6472    1.1360 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8600    0.5266    0.8585 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8292   -0.5491   -0.1664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4916   -1.2441   -0.0497 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4274   -2.5070   -0.8577 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3183   -1.5588    1.2985 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3757   -0.3189   -0.4349 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7564    0.5165   -0.1890 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2071   -1.2122    0.2101 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0216   -0.6846    1.1737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8403   -0.1445   -1.7330 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8407    1.4828    0.5502 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1175    2.0328   -0.9715 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5983    2.7796    0.6304 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8175    1.3874    1.7054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2115    1.7999   -1.9936 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6800    3.0394   -0.7713 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9337    1.9436   -1.4042 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1686    1.0298    2.0811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2694    3.1245    1.7277 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7176    1.2150    0.6043 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1867    0.0505    1.8299 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0346   -0.2024   -1.1968 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6283   -1.2840    0.0722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8137   -2.3070   -1.7781 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8871   -3.3208   -0.3171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4113   -2.8678   -1.2001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1190   -2.5216    1.4415 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3433   -0.3033   -1.5558 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 16 19  1  0
  7  2  1  0
 19 10  1  0
 19  6  1  0
  1 20  1  0
  1 21  1  0
  6 22  1  0
  7 23  1  0
  8 24  1  0
  8 25  1  0
  9 26  1  0
  9 27  1  0
 11 28  1  0
 11 29  1  0
 11 30  1  0
 12 31  1  0
 13 32  1  0
 14 33  1  0
 14 34  1  0
 15 35  1  0
 15 36  1  0
 17 37  1  0
 17 38  1  0
 17 39  1  0
 18 40  1  0
 19 41  1  0
M  END

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0       7.895   2.610   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.417   3.436   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.492  -1.159   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.495   3.340   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.206   0.818   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.956   3.388   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.522  -0.539   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.719   1.616   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.223   1.983   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.606   2.127   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.412   0.674   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.873   0.722   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.832   0.080   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.145   2.079   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.062  -0.587   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      -0.122   3.484   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0       8.141  -0.731   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0       1.747  -2.095   0.000  0.00  0.00           O+0
HETATM   19  O   UNK     0       5.406  -0.502   0.000  0.00  0.00           O+0
CONECT    1    8                                                            
CONECT    2   14                                                            
CONECT    3   15                                                            
CONECT    4    6    9                                                       
CONECT    5    7   10                                                       
CONECT    6    4   14                                                       
CONECT    7    5   15                                                       
CONECT    8    1    9   13                                                  
CONECT    9    4    8   11                                                  
CONECT   10    5   14   16                                                  
CONECT   11    9   12   19                                                  
CONECT   12   11   14   15                                                  
CONECT   13    8   17   19                                                  
CONECT   14    2    6   10   12                                             
CONECT   15    3    7   12   18                                             
CONECT   16   10                                                            
CONECT   17   13                                                            
CONECT   18   15                                                            
CONECT   19   11   13                                                       
MASTER        0    0    0    0    0    0    0    0   19    0   42    0
END

COMPND    HMDB0037059
HETATM    1  C1  UNL     1       4.432  -0.518  -0.071  1.00  0.00           C  
HETATM    2  C2  UNL     1       3.175  -0.863  -0.264  1.00  0.00           C  
HETATM    3  C3  UNL     1       2.642  -2.218  -0.131  1.00  0.00           C  
HETATM    4  O1  UNL     1       3.333  -3.263   0.085  1.00  0.00           O  
HETATM    5  O2  UNL     1       1.238  -2.145  -0.287  1.00  0.00           O  
HETATM    6  C4  UNL     1       0.909  -0.847   0.084  1.00  0.00           C  
HETATM    7  C5  UNL     1       2.011  -0.055  -0.644  1.00  0.00           C  
HETATM    8  C6  UNL     1       1.967   1.318  -0.111  1.00  0.00           C  
HETATM    9  C7  UNL     1       0.732   1.671   0.639  1.00  0.00           C  
HETATM   10  C8  UNL     1      -0.537   1.086   0.049  1.00  0.00           C  
HETATM   11  C9  UNL     1      -0.883   2.015  -1.125  1.00  0.00           C  
HETATM   12  C10 UNL     1      -1.611   1.268   1.076  1.00  0.00           C  
HETATM   13  O3  UNL     1      -1.901   2.647   1.136  1.00  0.00           O  
HETATM   14  C11 UNL     1      -2.860   0.527   0.858  1.00  0.00           C  
HETATM   15  C12 UNL     1      -2.829  -0.549  -0.166  1.00  0.00           C  
HETATM   16  C13 UNL     1      -1.492  -1.244  -0.050  1.00  0.00           C  
HETATM   17  C14 UNL     1      -1.427  -2.507  -0.858  1.00  0.00           C  
HETATM   18  O4  UNL     1      -1.318  -1.559   1.299  1.00  0.00           O  
HETATM   19  C15 UNL     1      -0.376  -0.319  -0.435  1.00  0.00           C  
HETATM   20  H1  UNL     1       4.756   0.517  -0.189  1.00  0.00           H  
HETATM   21  H2  UNL     1       5.207  -1.212   0.210  1.00  0.00           H  
HETATM   22  H3  UNL     1       1.022  -0.685   1.174  1.00  0.00           H  
HETATM   23  H4  UNL     1       1.840  -0.144  -1.733  1.00  0.00           H  
HETATM   24  H5  UNL     1       2.841   1.483   0.550  1.00  0.00           H  
HETATM   25  H6  UNL     1       2.118   2.033  -0.972  1.00  0.00           H  
HETATM   26  H7  UNL     1       0.598   2.780   0.630  1.00  0.00           H  
HETATM   27  H8  UNL     1       0.817   1.387   1.705  1.00  0.00           H  
HETATM   28  H9  UNL     1      -0.211   1.800  -1.994  1.00  0.00           H  
HETATM   29  H10 UNL     1      -0.680   3.039  -0.771  1.00  0.00           H  
HETATM   30  H11 UNL     1      -1.934   1.944  -1.404  1.00  0.00           H  
HETATM   31  H12 UNL     1      -1.169   1.030   2.081  1.00  0.00           H  
HETATM   32  H13 UNL     1      -1.269   3.124   1.728  1.00  0.00           H  
HETATM   33  H14 UNL     1      -3.718   1.215   0.604  1.00  0.00           H  
HETATM   34  H15 UNL     1      -3.187   0.050   1.830  1.00  0.00           H  
HETATM   35  H16 UNL     1      -3.035  -0.202  -1.197  1.00  0.00           H  
HETATM   36  H17 UNL     1      -3.628  -1.284   0.072  1.00  0.00           H  
HETATM   37  H18 UNL     1      -0.814  -2.307  -1.778  1.00  0.00           H  
HETATM   38  H19 UNL     1      -0.887  -3.321  -0.317  1.00  0.00           H  
HETATM   39  H20 UNL     1      -2.411  -2.868  -1.200  1.00  0.00           H  
HETATM   40  H21 UNL     1      -1.119  -2.522   1.441  1.00  0.00           H  
HETATM   41  H22 UNL     1      -0.343  -0.303  -1.556  1.00  0.00           H  
CONECT    1    2    2   20   21
CONECT    2    3    7
CONECT    3    4    4    5
CONECT    5    6
CONECT    6    7   19   22
CONECT    7    8   23
CONECT    8    9   24   25
CONECT    9   10   26   27
CONECT   10   11   12   19
CONECT   11   28   29   30
CONECT   12   13   14   31
CONECT   13   32
CONECT   14   15   33   34
CONECT   15   16   35   36
CONECT   16   17   18   19
CONECT   17   37   38   39
CONECT   18   40
CONECT   19   41
END

HMDB0037059
     RDKit          3D
1alpha-Hydroxyarbusculin A
 41 43  0  0  0  0  0  0  0  0999 V2000
    4.4321   -0.5177   -0.0707 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1753   -0.8629   -0.2643 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6419   -2.2183   -0.1312 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3326   -3.2627    0.0853 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2384   -2.1446   -0.2866 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9088   -0.8469    0.0841 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0109   -0.0547   -0.6444 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9668    1.3184   -0.1114 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7324    1.6706    0.6385 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5373    1.0859    0.0488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8830    2.0153   -1.1246 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6109    1.2682    1.0762 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9007    2.6472    1.1360 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8600    0.5266    0.8585 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8292   -0.5491   -0.1664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4916   -1.2441   -0.0497 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4274   -2.5070   -0.8577 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3183   -1.5588    1.2985 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3757   -0.3189   -0.4349 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7564    0.5165   -0.1890 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2071   -1.2122    0.2101 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0216   -0.6846    1.1737 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8403   -0.1445   -1.7330 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8407    1.4828    0.5502 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1175    2.0328   -0.9715 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5983    2.7796    0.6304 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8175    1.3874    1.7054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2115    1.7999   -1.9936 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6800    3.0394   -0.7713 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9337    1.9436   -1.4042 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1686    1.0298    2.0811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2694    3.1245    1.7277 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7176    1.2150    0.6043 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1867    0.0505    1.8299 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0346   -0.2024   -1.1968 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6283   -1.2840    0.0722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8137   -2.3070   -1.7781 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8871   -3.3208   -0.3171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4113   -2.8678   -1.2001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1190   -2.5216    1.4415 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3433   -0.3033   -1.5558 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 16 19  1  0
  7  2  1  0
 19 10  1  0
 19  6  1  0
  1 20  1  0
  1 21  1  0
  6 22  1  0
  7 23  1  0
  8 24  1  0
  8 25  1  0
  9 26  1  0
  9 27  1  0
 11 28  1  0
 11 29  1  0
 11 30  1  0
 12 31  1  0
 13 32  1  0
 14 33  1  0
 14 34  1  0
 15 35  1  0
 15 36  1  0
 17 37  1  0
 17 38  1  0
 17 39  1  0
 18 40  1  0
 19 41  1  0
M  END

View in JSmol View NMR Assignments View Stereo Labels

Synonyms

Value	Source
1a-Hydroxyarbusculin a	Generator
1Α-hydroxyarbusculin a	Generator
1beta-Hydroxyarbusculin a	HMDB
[3AS-(3aalpha,5abeta,6beta,9alpha,9aalpha,9bbeta)]-decahydro-6,9-dihydroxy-5a,9-dimethyl-3-methylenenaphtho[1,2-b]furan-2(3H)-one	HMDB

Chemical Formula

C₁₅H₂₂O₄

Average Molecular Weight

266.3328

Monoisotopic Molecular Weight

266.151809192

IUPAC Name

6,9-dihydroxy-5a,9-dimethyl-3-methylidene-dodecahydronaphtho[1,2-b]furan-2-one

Traditional Name

6,9-dihydroxy-5a,9-dimethyl-3-methylidene-octahydronaphtho[1,2-b]furan-2-one

CAS Registry Number

50301-94-5

SMILES

CC1(O)CCC(O)C2(C)CCC3C(OC(=O)C3=C)C12

InChI Identifier

InChI=1S/C15H22O4/c1-8-9-4-6-14(2)10(16)5-7-15(3,18)12(14)11(9)19-13(8)17/h9-12,16,18H,1,4-7H2,2-3H3

InChI Key

LVABKRFKENTQBT-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as eudesmanolides, secoeudesmanolides, and derivatives. These are terpenoids with a structure based on the eudesmanolide (a 3,5a,9-trimethyl-naphtho[1,2-b]furan-2-one derivative) or secoeudesmanolide (a 3,6-dimethyl-5-(pentan-2-yl)-1-benzofuran-2-one derivative) skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Eudesmanolides, secoeudesmanolides, and derivatives

Alternative Parents

Substituents

Eudesmanolide
Sesquiterpenoid
Naphthofuran
Gamma butyrolactone
Cyclic alcohol
Tertiary alcohol
Tetrahydrofuran
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Secondary alcohol
Lactone
Carboxylic acid ester
Oxacycle
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organoheterocyclic compound
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cell membrane (HMDB: HMDB0037059)

Cellular substructure

Route of exposure

Enteral

Ingestion (HMDB: HMDB0037059)

Source

Endogenous

Endogenous (HMDB: HMDB0037059)

Plant

Plant (HMDB: HMDB0037059)

Animal

Animal (HMDB: HMDB0037059)

Exogenous

Food

Food (HMDB: HMDB0037059)

Herb and spice

Herbs and Spices (FooDB: FOOD00866)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid peroxidation (HMDB: HMDB0037059)

Biochemical process

Fatty acid metabolism (HMDB: HMDB0037059)

Cellular process

Cell signaling (HMDB: HMDB0037059)

Biochemical pathway

Lipid metabolism pathway (HMDB: HMDB0037059)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0037059)

Nutrient

Nutrient (HMDB: HMDB0037059)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0037059)

Emulsifier (HMDB: HMDB0037059)

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	194 - 196 °C	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	4602 mg/L @ 25 °C (est)	The Good Scents Company Information System
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	6.68 g/L	ALOGPS
logP	0.98	ALOGPS
logP	1.2	ChemAxon
logS	-1.6	ALOGPS
pKa (Strongest Acidic)	14.38	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	66.76 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	69.52 m³·mol⁻¹	ChemAxon
Polarizability	28.76 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	161.071	31661259
DarkChem	[M-H]-	156.519	31661259
DeepCCS	[M-2H]-	199.661	30932474
DeepCCS	[M+Na]+	175.226	30932474
AllCCS	[M+H]+	163.1	32859911
AllCCS	[M+H-H2O]+	159.6	32859911
AllCCS	[M+NH4]+	166.4	32859911
AllCCS	[M+Na]+	167.3	32859911
AllCCS	[M-H]-	167.5	32859911
AllCCS	[M+Na-2H]-	167.5	32859911
AllCCS	[M+HCOO]-	167.7	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
1alpha-Hydroxyarbusculin A	CC1(O)CCC(O)C2(C)CCC3C(OC(=O)C3=C)C12	3367.0	Standard polar	33892256
1alpha-Hydroxyarbusculin A	CC1(O)CCC(O)C2(C)CCC3C(OC(=O)C3=C)C12	2193.4	Standard non polar	33892256
1alpha-Hydroxyarbusculin A	CC1(O)CCC(O)C2(C)CCC3C(OC(=O)C3=C)C12	2397.0	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
1alpha-Hydroxyarbusculin A,1TMS,isomer #1	C=C1C(=O)OC2C1CCC1(C)C(O)CCC(C)(O[Si](C)(C)C)C21	2306.0	Semi standard non polar	33892256
1alpha-Hydroxyarbusculin A,1TMS,isomer #2	C=C1C(=O)OC2C1CCC1(C)C(O[Si](C)(C)C)CCC(C)(O)C21	2317.0	Semi standard non polar	33892256
1alpha-Hydroxyarbusculin A,2TMS,isomer #1	C=C1C(=O)OC2C1CCC1(C)C(O[Si](C)(C)C)CCC(C)(O[Si](C)(C)C)C21	2358.1	Semi standard non polar	33892256
1alpha-Hydroxyarbusculin A,1TBDMS,isomer #1	C=C1C(=O)OC2C1CCC1(C)C(O)CCC(C)(O[Si](C)(C)C(C)(C)C)C21	2547.2	Semi standard non polar	33892256
1alpha-Hydroxyarbusculin A,1TBDMS,isomer #2	C=C1C(=O)OC2C1CCC1(C)C(O[Si](C)(C)C(C)(C)C)CCC(C)(O)C21	2551.1	Semi standard non polar	33892256
1alpha-Hydroxyarbusculin A,2TBDMS,isomer #1	C=C1C(=O)OC2C1CCC1(C)C(O[Si](C)(C)C(C)(C)C)CCC(C)(O[Si](C)(C)C(C)(C)C)C21	2803.8	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 1alpha-Hydroxyarbusculin A GC-MS (Non-derivatized) - 70eV, Positive	splash10-0pdj-6790000000-35e83f4787788e5fc54b	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 1alpha-Hydroxyarbusculin A GC-MS (2 TMS) - 70eV, Positive	splash10-0092-3149000000-348c8fa6ca0fc4c62e5b	2017-10-06	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 1alpha-Hydroxyarbusculin A GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 10V, Positive-QTOF	splash10-00kb-0190000000-c4950747fd8d4a11cae4	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 20V, Positive-QTOF	splash10-0032-0790000000-02e8098eca7f8ba4b1d7	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 40V, Positive-QTOF	splash10-0f7o-9820000000-48982c141ae5cc18cf64	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 10V, Negative-QTOF	splash10-014i-0090000000-ceb1483d126a8d10f175	2016-08-04	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 20V, Negative-QTOF	splash10-00r2-0190000000-ca90e05e632fc1248476	2016-08-04	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 40V, Negative-QTOF	splash10-0udj-9640000000-4a9e7ba8051436fd30d6	2016-08-04	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 10V, Negative-QTOF	splash10-014i-0090000000-c6cc318d73093d112373	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 20V, Negative-QTOF	splash10-014i-0190000000-1cee06f3cbcf6c001b91	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 40V, Negative-QTOF	splash10-03di-4920000000-aafeb32f74732e424ca5	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 10V, Positive-QTOF	splash10-014i-0090000000-8b4925e62538a47e1105	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 20V, Positive-QTOF	splash10-014i-0490000000-6740fed5dc794fad2e69	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 1alpha-Hydroxyarbusculin A 40V, Positive-QTOF	splash10-01b9-3910000000-b8f677e6c9eabb005a2c	2021-09-25	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Cytoplasm
Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB016042

KNApSAcK ID

C00013003

Chemspider ID

35014363

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

74426514

PDB ID

Not Available

ChEBI ID

174512

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

rw1859031

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for 1alpha-Hydroxyarbusculin A (HMDB0037059)

MOL for HMDB0037059 (1alpha-Hydroxyarbusculin A)

3D MOL for HMDB0037059 (1alpha-Hydroxyarbusculin A)

3D SDF for HMDB0037059 (1alpha-Hydroxyarbusculin A)

3D-SDF for HMDB0037059 (1alpha-Hydroxyarbusculin A)

PDB for HMDB0037059 (1alpha-Hydroxyarbusculin A)

3D PDB for HMDB0037059 (1alpha-Hydroxyarbusculin A)

SMILES for HMDB0037059 (1alpha-Hydroxyarbusculin A)

INCHI for HMDB0037059 (1alpha-Hydroxyarbusculin A)

Structure for HMDB0037059 (1alpha-Hydroxyarbusculin A)

3D Structure for HMDB0037059 (1alpha-Hydroxyarbusculin A)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra

NMR Spectra