Hmdb loader

Showing metabocard for Rhodinyl acetate (HMDB0037186)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 22:25:39 UTC
Update Date2023-02-21 17:25:43 UTC
HMDB IDHMDB0037186
Secondary Accession Numbers
  • HMDB37186
Metabolite Identification
Common NameRhodinyl acetate
DescriptionRhodinyl acetate belongs to the class of organic compounds known as fatty alcohol esters. These are ester derivatives of a fatty alcohol. Based on a literature review a small amount of articles have been published on Rhodinyl acetate.
Structure
Data?1677000343
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0037186 (Rhodinyl acetate)


  Mrv0541 05061309372D          

 14 13  0  0  0  0            999 V2000
   -4.8395   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3052   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6961   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4105   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9816   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5526   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1618   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5908   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5908   -3.6829    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8763   -2.4454    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0  0  0  0
  7  5  1  0  0  0  0
  9  8  1  0  0  0  0
 10  1  2  0  0  0  0
 10  2  1  0  0  0  0
 10  6  1  0  0  0  0
 11  3  1  0  0  0  0
 11  7  1  0  0  0  0
 11  8  1  0  0  0  0
 12  4  1  0  0  0  0
 13 12  2  0  0  0  0
 14  9  1  0  0  0  0
 14 12  1  0  0  0  0
M  END
Download

3D MOL for HMDB0037186 (Rhodinyl acetate)

HMDB0037186
     RDKit          3D
Rhodinyl acetate
 36 35  0  0  0  0  0  0  0  0999 V2000
   -5.1187    1.3504   -0.9668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3233    0.7703   -0.0873 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7981   -0.3276    0.7685 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8940    1.1912    0.0939 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9498    0.0167   -0.1938 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5580    0.5229    0.0097 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5006   -0.5128   -0.2343 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3979   -1.7035    0.6487 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8594    0.1563   -0.1087 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8886   -0.8963   -0.3560 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2069   -0.4997   -0.2896 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8511    0.0445    0.7881 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2752    0.4536    0.8021 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1509    0.1904    1.8168 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1387    0.9994   -1.0477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7485    2.1741   -1.6032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1810   -0.4796    1.6722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7564   -1.2726    0.1552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8661   -0.2009    1.0465 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7852    1.5553    1.1303 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7078    2.0176   -0.6074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1439   -0.3238   -1.2136 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1823   -0.7625    0.5707 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3869    1.3761   -0.6787 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4356    0.8931    1.0383 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4161   -0.8120   -1.3198 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6049   -1.9987    0.9460 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0210   -1.5395    1.5522 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8854   -2.5653    0.1084 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9181    0.5535    0.9211 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8569    0.9594   -0.8785 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6957   -1.3329   -1.3630 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7211   -1.7150    0.3698 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8485    0.0662   -0.0387 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7869    0.0876    1.7320 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2988    1.5641    0.7372 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  2  0
  1 15  1  0
  1 16  1  0
  3 17  1  0
  3 18  1  0
  3 19  1  0
  4 20  1  0
  4 21  1  0
  5 22  1  0
  5 23  1  0
  6 24  1  0
  6 25  1  0
  7 26  1  0
  8 27  1  0
  8 28  1  0
  8 29  1  0
  9 30  1  0
  9 31  1  0
 10 32  1  0
 10 33  1  0
 13 34  1  0
 13 35  1  0
 13 36  1  0
M  END
Download

3D SDF for HMDB0037186 (Rhodinyl acetate)


  Mrv0541 05061309372D          

 14 13  0  0  0  0            999 V2000
   -4.8395   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -3.6829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3052   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6961   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4105   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9816   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5526   -2.4454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1618   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1250   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2671   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5908   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5908   -3.6829    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8763   -2.4454    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0  0  0  0
  7  5  1  0  0  0  0
  9  8  1  0  0  0  0
 10  1  2  0  0  0  0
 10  2  1  0  0  0  0
 10  6  1  0  0  0  0
 11  3  1  0  0  0  0
 11  7  1  0  0  0  0
 11  8  1  0  0  0  0
 12  4  1  0  0  0  0
 13 12  2  0  0  0  0
 14  9  1  0  0  0  0
 14 12  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0037186

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(CCCC(C)=C)CCOC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C12H22O2/c1-10(2)6-5-7-11(3)8-9-14-12(4)13/h11H,1,5-9H2,2-4H3

> <INCHI_KEY>
WNXJCQNXNOOMDJ-UHFFFAOYSA-N

> <FORMULA>
C12H22O2

> <MOLECULAR_WEIGHT>
198.3019

> <EXACT_MASS>
198.161979948

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
24.423955327344487

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3,7-dimethyloct-7-en-1-yl acetate

> <ALOGPS_LOGP>
3.99

> <JCHEM_LOGP>
3.2511143979999995

> <ALOGPS_LOGS>
-3.71

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-6.993832178448764

> <JCHEM_POLAR_SURFACE_AREA>
26.3

> <JCHEM_REFRACTIVITY>
58.56510000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.90e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3,7-dimethyloct-7-en-1-yl acetate

> <JCHEM_VEBER_RULE>
1

$$$$
Download

3D-SDF for HMDB0037186 (Rhodinyl acetate)

HMDB0037186
     RDKit          3D
Rhodinyl acetate
 36 35  0  0  0  0  0  0  0  0999 V2000
   -5.1187    1.3504   -0.9668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3233    0.7703   -0.0873 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7981   -0.3276    0.7685 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8940    1.1912    0.0939 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9498    0.0167   -0.1938 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5580    0.5229    0.0097 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5006   -0.5128   -0.2343 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3979   -1.7035    0.6487 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8594    0.1563   -0.1087 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8886   -0.8963   -0.3560 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2069   -0.4997   -0.2896 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8511    0.0445    0.7881 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2752    0.4536    0.8021 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1509    0.1904    1.8168 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1387    0.9994   -1.0477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7485    2.1741   -1.6032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1810   -0.4796    1.6722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7564   -1.2726    0.1552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8661   -0.2009    1.0465 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7852    1.5553    1.1303 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7078    2.0176   -0.6074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1439   -0.3238   -1.2136 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1823   -0.7625    0.5707 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3869    1.3761   -0.6787 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4356    0.8931    1.0383 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4161   -0.8120   -1.3198 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6049   -1.9987    0.9460 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0210   -1.5395    1.5522 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8854   -2.5653    0.1084 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9181    0.5535    0.9211 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8569    0.9594   -0.8785 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6957   -1.3329   -1.3630 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7211   -1.7150    0.3698 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8485    0.0662   -0.0387 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7869    0.0876    1.7320 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2988    1.5641    0.7372 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  2  0
  1 15  1  0
  1 16  1  0
  3 17  1  0
  3 18  1  0
  3 19  1  0
  4 20  1  0
  4 21  1  0
  5 22  1  0
  5 23  1  0
  6 24  1  0
  6 25  1  0
  7 26  1  0
  8 27  1  0
  8 28  1  0
  8 29  1  0
  9 30  1  0
  9 31  1  0
 10 32  1  0
 10 33  1  0
 13 34  1  0
 13 35  1  0
 13 36  1  0
M  END
Download

PDB for HMDB0037186 (Rhodinyl acetate)

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      -9.034  -4.565   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -7.700  -6.875   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.365  -6.875   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.303  -4.565   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -5.033  -5.335   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -6.366  -4.565   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.699  -4.565   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.032  -4.565   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.302  -5.335   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -7.700  -5.335   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.365  -5.335   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.969  -5.335   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       2.969  -6.875   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0       1.636  -4.565   0.000  0.00  0.00           O+0
CONECT    1   10                                                            
CONECT    2   10                                                            
CONECT    3   11                                                            
CONECT    4   12                                                            
CONECT    5    6    7                                                       
CONECT    6    5   10                                                       
CONECT    7    5   11                                                       
CONECT    8    9   11                                                       
CONECT    9    8   14                                                       
CONECT   10    1    2    6                                                  
CONECT   11    3    7    8                                                  
CONECT   12    4   13   14                                                  
CONECT   13   12                                                            
CONECT   14    9   12                                                       
MASTER        0    0    0    0    0    0    0    0   14    0   26    0
END
Download

3D PDB for HMDB0037186 (Rhodinyl acetate)

COMPND    HMDB0037186
HETATM    1  C1  UNL     1      -5.119   1.350  -0.967  1.00  0.00           C  
HETATM    2  C2  UNL     1      -4.323   0.770  -0.087  1.00  0.00           C  
HETATM    3  C3  UNL     1      -4.798  -0.328   0.769  1.00  0.00           C  
HETATM    4  C4  UNL     1      -2.894   1.191   0.094  1.00  0.00           C  
HETATM    5  C5  UNL     1      -1.950   0.017  -0.194  1.00  0.00           C  
HETATM    6  C6  UNL     1      -0.558   0.523   0.010  1.00  0.00           C  
HETATM    7  C7  UNL     1       0.501  -0.513  -0.234  1.00  0.00           C  
HETATM    8  C8  UNL     1       0.398  -1.704   0.649  1.00  0.00           C  
HETATM    9  C9  UNL     1       1.859   0.156  -0.109  1.00  0.00           C  
HETATM   10  C10 UNL     1       2.889  -0.896  -0.356  1.00  0.00           C  
HETATM   11  O1  UNL     1       4.207  -0.500  -0.290  1.00  0.00           O  
HETATM   12  C11 UNL     1       4.851   0.044   0.788  1.00  0.00           C  
HETATM   13  C12 UNL     1       6.275   0.454   0.802  1.00  0.00           C  
HETATM   14  O2  UNL     1       4.151   0.190   1.817  1.00  0.00           O  
HETATM   15  H1  UNL     1      -6.139   0.999  -1.048  1.00  0.00           H  
HETATM   16  H2  UNL     1      -4.749   2.174  -1.603  1.00  0.00           H  
HETATM   17  H3  UNL     1      -4.181  -0.480   1.672  1.00  0.00           H  
HETATM   18  H4  UNL     1      -4.756  -1.273   0.155  1.00  0.00           H  
HETATM   19  H5  UNL     1      -5.866  -0.201   1.047  1.00  0.00           H  
HETATM   20  H6  UNL     1      -2.785   1.555   1.130  1.00  0.00           H  
HETATM   21  H7  UNL     1      -2.708   2.018  -0.607  1.00  0.00           H  
HETATM   22  H8  UNL     1      -2.144  -0.324  -1.214  1.00  0.00           H  
HETATM   23  H9  UNL     1      -2.182  -0.762   0.571  1.00  0.00           H  
HETATM   24  H10 UNL     1      -0.387   1.376  -0.679  1.00  0.00           H  
HETATM   25  H11 UNL     1      -0.436   0.893   1.038  1.00  0.00           H  
HETATM   26  H12 UNL     1       0.416  -0.812  -1.320  1.00  0.00           H  
HETATM   27  H13 UNL     1      -0.605  -1.999   0.946  1.00  0.00           H  
HETATM   28  H14 UNL     1       1.021  -1.539   1.552  1.00  0.00           H  
HETATM   29  H15 UNL     1       0.885  -2.565   0.108  1.00  0.00           H  
HETATM   30  H16 UNL     1       1.918   0.553   0.921  1.00  0.00           H  
HETATM   31  H17 UNL     1       1.857   0.959  -0.878  1.00  0.00           H  
HETATM   32  H18 UNL     1       2.696  -1.333  -1.363  1.00  0.00           H  
HETATM   33  H19 UNL     1       2.721  -1.715   0.370  1.00  0.00           H  
HETATM   34  H20 UNL     1       6.849   0.066  -0.039  1.00  0.00           H  
HETATM   35  H21 UNL     1       6.787   0.088   1.732  1.00  0.00           H  
HETATM   36  H22 UNL     1       6.299   1.564   0.737  1.00  0.00           H  
CONECT    1    2    2   15   16
CONECT    2    3    4
CONECT    3   17   18   19
CONECT    4    5   20   21
CONECT    5    6   22   23
CONECT    6    7   24   25
CONECT    7    8    9   26
CONECT    8   27   28   29
CONECT    9   10   30   31
CONECT   10   11   32   33
CONECT   11   12
CONECT   12   13   14   14
CONECT   13   34   35   36
END
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SMILES for HMDB0037186 (Rhodinyl acetate)

CC(CCCC(C)=C)CCOC(C)=O
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INCHI for HMDB0037186 (Rhodinyl acetate)

InChI=1S/C12H22O2/c1-10(2)6-5-7-11(3)8-9-14-12(4)13/h11H,1,5-9H2,2-4H3
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View in JSmolView Stereo Labels
Synonyms
ValueSource
Rhodinyl acetic acidGenerator
3,7-Dimethyl-7-octen-1-yl acetateHMDB
3,7-Dimethyl-7-octen-1-yl ethanoateHMDB
7-Octen-1-ol, 3,7-dimethyl-, 1-acetateHMDB
7-Octen-1-ol, 3,7-dimethyl-, acetateHMDB
alpha-Citronellyl acetateHMDB
FEMA 2981HMDB
Chemical FormulaC12H22O2
Average Molecular Weight198.3019
Monoisotopic Molecular Weight198.161979948
IUPAC Name3,7-dimethyloct-7-en-1-yl acetate
Traditional Name3,7-dimethyloct-7-en-1-yl acetate
CAS Registry Number141-11-7
SMILES
CC(CCCC(C)=C)CCOC(C)=O
InChI Identifier
InChI=1S/C12H22O2/c1-10(2)6-5-7-11(3)8-9-14-12(4)13/h11H,1,5-9H2,2-4H3
InChI KeyWNXJCQNXNOOMDJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty alcohol esters. These are ester derivatives of a fatty alcohol.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty alcohol esters
Direct ParentFatty alcohol esters
Alternative Parents
Substituents
  • Fatty alcohol ester
  • Carboxylic acid ester
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Organoleptic effect
Disposition
Biological locationRoute of exposureSource
Process
Naturally occurring process
Role
Biological roleIndustrial application
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.039 g/LALOGPS
logP3.99ALOGPS
logP3.25ChemAxon
logS-3.7ALOGPS
pKa (Strongest Basic)-7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area26.3 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity58.57 m³·mol⁻¹ChemAxon
Polarizability24.42 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+148.25931661259
DarkChem[M-H]-145.4431661259
DeepCCS[M+H]+148.94230932474
DeepCCS[M-H]-145.16330932474
DeepCCS[M-2H]-182.51930932474
DeepCCS[M+Na]+158.16230932474
AllCCS[M+H]+151.532859911
AllCCS[M+H-H2O]+147.932859911
AllCCS[M+NH4]+154.932859911
AllCCS[M+Na]+155.932859911
AllCCS[M-H]-152.232859911
AllCCS[M+Na-2H]-153.732859911
AllCCS[M+HCOO]-155.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Rhodinyl acetateCC(CCCC(C)=C)CCOC(C)=O1696.4Standard polar33892256
Rhodinyl acetateCC(CCCC(C)=C)CCOC(C)=O1317.0Standard non polar33892256
Rhodinyl acetateCC(CCCC(C)=C)CCOC(C)=O1352.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Rhodinyl acetate GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-9300000000-76a1c20aba37ca03e6e72017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Rhodinyl acetate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 10V, Positive-QTOFsplash10-0002-1900000000-b3fda8bca8ba19a85a602015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 20V, Positive-QTOFsplash10-000i-6900000000-bd05df2816b4544366862015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 40V, Positive-QTOFsplash10-066u-9100000000-214da7a43edc5763da0e2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 10V, Negative-QTOFsplash10-0002-3900000000-3fe62f4f76fa1babf94c2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 20V, Negative-QTOFsplash10-0a4i-9400000000-2ee1c319d35adda73a232015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 40V, Negative-QTOFsplash10-0a4l-9200000000-e80d5513910bafbe1d6d2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 10V, Positive-QTOFsplash10-05o1-9300000000-bb551fa2923f6219fbf12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 20V, Positive-QTOFsplash10-00lu-9000000000-4d785888908076e184b12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 40V, Positive-QTOFsplash10-067l-9000000000-a71fc4b7f24dfaee7dd22021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 10V, Negative-QTOFsplash10-0a4j-6900000000-f8f5762ce1682c98f6c72021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 20V, Negative-QTOFsplash10-0a4i-9100000000-1d8a124228d41e2f4f6c2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Rhodinyl acetate 40V, Negative-QTOFsplash10-0a4i-9000000000-995316cfd01233c462442021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB016188
KNApSAcK IDNot Available
Chemspider ID8501
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound8833
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.