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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 22:51:35 UTC
Update Date2022-03-07 02:55:25 UTC
HMDB IDHMDB0037607
Secondary Accession Numbers
  • HMDB37607
Metabolite Identification
Common NameGanolucidic acid E
DescriptionGanolucidic acid E, also known as ganolucidate e, belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Ganolucidic acid E is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563863059
Synonyms
ValueSource
Ganolucidate eGenerator
15alpha-Hydroxy-3,11-dioxo-5alpha-lanosta-8,24E-dien-26-Oic acidHMDB
(2Z)-6-{12-hydroxy-2,6,6,11,15-pentamethyl-5,17-dioxotetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-en-14-yl}-2-methylhept-2-enoateGenerator
Chemical FormulaC30H44O5
Average Molecular Weight484.6674
Monoisotopic Molecular Weight484.318874518
IUPAC Name(2Z)-6-{12-hydroxy-2,6,6,11,15-pentamethyl-5,17-dioxotetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-en-14-yl}-2-methylhept-2-enoic acid
Traditional Name(2Z)-6-{12-hydroxy-2,6,6,11,15-pentamethyl-5,17-dioxotetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-en-14-yl}-2-methylhept-2-enoic acid
CAS Registry Number114567-50-9
SMILES
CC(CC\C=C(\C)C(O)=O)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC3
InChI Identifier
InChI=1S/C30H44O5/c1-17(9-8-10-18(2)26(34)35)20-15-24(33)30(7)19-11-12-22-27(3,4)23(32)13-14-28(22,5)25(19)21(31)16-29(20,30)6/h10,17,20,22,24,33H,8-9,11-16H2,1-7H3,(H,34,35)/b18-10-
InChI KeyXRBLVCACUHPHDE-ZDLGFXPLSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0029 g/LALOGPS
logP5.39ALOGPS
logP5.56ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)4.66ChemAxon
pKa (Strongest Basic)-0.44ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area91.67 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity137.65 m³·mol⁻¹ChemAxon
Polarizability55.44 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+214.10931661259
DarkChem[M-H]-205.26831661259
DeepCCS[M-2H]-251.46530932474
DeepCCS[M+Na]+226.88930932474
AllCCS[M+H]+218.332859911
AllCCS[M+H-H2O]+216.732859911
AllCCS[M+NH4]+219.832859911
AllCCS[M+Na]+220.332859911
AllCCS[M-H]-220.332859911
AllCCS[M+Na-2H]-222.732859911
AllCCS[M+HCOO]-225.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Ganolucidic acid ECC(CC\C=C(\C)C(O)=O)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC35011.8Standard polar33892256
Ganolucidic acid ECC(CC\C=C(\C)C(O)=O)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC33401.0Standard non polar33892256
Ganolucidic acid ECC(CC\C=C(\C)C(O)=O)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC34020.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Ganolucidic acid E,1TMS,isomer #1C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3979.6Semi standard non polar33892256
Ganolucidic acid E,1TMS,isomer #2C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O4038.0Semi standard non polar33892256
Ganolucidic acid E,1TMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O3919.7Semi standard non polar33892256
Ganolucidic acid E,1TMS,isomer #4C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O3983.9Semi standard non polar33892256
Ganolucidic acid E,2TMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3907.2Semi standard non polar33892256
Ganolucidic acid E,2TMS,isomer #2C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3806.0Semi standard non polar33892256
Ganolucidic acid E,2TMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3880.3Semi standard non polar33892256
Ganolucidic acid E,2TMS,isomer #4C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O3840.5Semi standard non polar33892256
Ganolucidic acid E,2TMS,isomer #5C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O3877.1Semi standard non polar33892256
Ganolucidic acid E,2TMS,isomer #6C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O3757.8Semi standard non polar33892256
Ganolucidic acid E,3TMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3688.6Semi standard non polar33892256
Ganolucidic acid E,3TMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3693.3Standard non polar33892256
Ganolucidic acid E,3TMS,isomer #2C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3728.9Semi standard non polar33892256
Ganolucidic acid E,3TMS,isomer #2C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3612.7Standard non polar33892256
Ganolucidic acid E,3TMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3671.5Semi standard non polar33892256
Ganolucidic acid E,3TMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3629.8Standard non polar33892256
Ganolucidic acid E,3TMS,isomer #4C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O3653.1Semi standard non polar33892256
Ganolucidic acid E,3TMS,isomer #4C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O3575.6Standard non polar33892256
Ganolucidic acid E,4TMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3570.5Semi standard non polar33892256
Ganolucidic acid E,4TMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C3593.2Standard non polar33892256
Ganolucidic acid E,1TBDMS,isomer #1C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4228.9Semi standard non polar33892256
Ganolucidic acid E,1TBDMS,isomer #2C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O4278.7Semi standard non polar33892256
Ganolucidic acid E,1TBDMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O4180.4Semi standard non polar33892256
Ganolucidic acid E,1TBDMS,isomer #4C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O4213.8Semi standard non polar33892256
Ganolucidic acid E,2TBDMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4395.2Semi standard non polar33892256
Ganolucidic acid E,2TBDMS,isomer #2C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4273.3Semi standard non polar33892256
Ganolucidic acid E,2TBDMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4369.8Semi standard non polar33892256
Ganolucidic acid E,2TBDMS,isomer #4C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O4323.0Semi standard non polar33892256
Ganolucidic acid E,2TBDMS,isomer #5C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O4364.4Semi standard non polar33892256
Ganolucidic acid E,2TBDMS,isomer #6C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O4257.8Semi standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4377.3Semi standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #1C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CCC(=O)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4257.8Standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #2C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4451.4Semi standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #2C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(=O)CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4157.3Standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4334.0Semi standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #3C/C(=C/CCC(C)C1CC(O)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O[Si](C)(C)C(C)(C)C4147.5Standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #4C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O4341.3Semi standard non polar33892256
Ganolucidic acid E,3TBDMS,isomer #4C/C(=C/CCC(C)C1CC(O[Si](C)(C)C(C)(C)C)C2(C)C3=C(C(O[Si](C)(C)C(C)(C)C)=CC12C)C1(C)CC=C(O[Si](C)(C)C(C)(C)C)C(C)(C)C1CC3)C(=O)O4105.7Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ganolucidic acid E GC-MS (Non-derivatized) - 70eV, Positivesplash10-014l-0122900000-c00bbbd677c44169ff932017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ganolucidic acid E GC-MS (2 TMS) - 70eV, Positivesplash10-03di-2121259000-bd45a11dd66ad735ee9b2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ganolucidic acid E GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 10V, Positive-QTOFsplash10-014r-0000900000-11f81172f9e30333de4b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 20V, Positive-QTOFsplash10-02mv-0103900000-f544812bd14ac56a92d82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 40V, Positive-QTOFsplash10-06di-4607900000-10f298ed3057f8e6b8de2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 10V, Negative-QTOFsplash10-001i-0000900000-9ded364fed282b24f1652016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 20V, Negative-QTOFsplash10-00sr-0000900000-06f04b00746fbe9b54bf2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 40V, Negative-QTOFsplash10-0g4l-4020900000-431e5a376ba58c7102022016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 10V, Positive-QTOFsplash10-0002-9202300000-fd30f9fe4fa78b755ed82021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 20V, Positive-QTOFsplash10-0005-9004400000-4b7b7172888b19ec64db2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 40V, Positive-QTOFsplash10-014l-9214000000-7bae7931bc1714d2027f2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 10V, Negative-QTOFsplash10-001i-0000900000-5d9a32665cee1f6c15722021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 20V, Negative-QTOFsplash10-01p9-0000900000-e6b10d34a6c949b864202021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganolucidic acid E 40V, Negative-QTOFsplash10-00dr-2006900000-24aec08aa68a1fc065922021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB016720
KNApSAcK IDC00023874
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131752214
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.