Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 23:23:20 UTC
Update Date2022-03-07 02:55:37 UTC
HMDB IDHMDB0038104
Secondary Accession Numbers
  • HMDB38104
Metabolite Identification
Common NameIsolinderenolide
DescriptionIsolinderenolide belongs to the class of organic compounds known as tetrahydrofurans. These are heterocyclic compounds containing a saturated, aliphatic, five-membered ring where a carbon is replaced by an oxygen. Isolinderenolide has been detected, but not quantified in, several different foods, such as teas (Camellia sinensis), green tea, herbs and spices, herbal tea, and red tea. This could make isolinderenolide a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Isolinderenolide.
Structure
Data?1563863140
Synonyms
ValueSource
3-(11-Hexadecenylidene)dihydro-4-hydroxy-5-methylene-2(3H)-furanoneHMDB
Chemical FormulaC21H34O3
Average Molecular Weight334.4929
Monoisotopic Molecular Weight334.250794954
IUPAC Name(3Z)-3-[(11Z)-hexadec-11-en-1-ylidene]-4-hydroxy-5-methylideneoxolan-2-one
Traditional Name(3Z)-3-[(11Z)-hexadec-11-en-1-ylidene]-4-hydroxy-5-methylideneoxolan-2-one
CAS Registry Number139328-80-6
SMILES
CCCC\C=C/CCCCCCCCC\C=C1\C(O)C(=C)OC1=O
InChI Identifier
InChI=1S/C21H34O3/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-19-20(22)18(2)24-21(19)23/h6-7,17,20,22H,2-5,8-16H2,1H3/b7-6-,19-17-
InChI KeyPBBONDCKOKLJIC-MJKSAKIDSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tetrahydrofurans. These are heterocyclic compounds containing a saturated, aliphatic, five-membered ring where a carbon is replaced by an oxygen.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassTetrahydrofurans
Sub ClassNot Available
Direct ParentTetrahydrofurans
Alternative Parents
Substituents
  • Enol ester
  • Tetrahydrofuran
  • Enoate ester
  • Alpha,beta-unsaturated carboxylic ester
  • Carboxylic acid ester
  • Lactone
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Oxacycle
  • Carbonyl group
  • Organooxygen compound
  • Organic oxygen compound
  • Alcohol
  • Organic oxide
  • Hydrocarbon derivative
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.17 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0001 g/LALOGPS
logP6.65ALOGPS
logP6.38ChemAxon
logS-6.5ALOGPS
pKa (Strongest Acidic)12.87ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area46.53 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity101.86 m³·mol⁻¹ChemAxon
Polarizability41.52 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+190.71731661259
DarkChem[M-H]-188.18831661259
DeepCCS[M+H]+194.15630932474
DeepCCS[M-H]-191.79830932474
DeepCCS[M-2H]-224.68430932474
DeepCCS[M+Na]+200.24930932474
AllCCS[M+H]+193.132859911
AllCCS[M+H-H2O]+190.232859911
AllCCS[M+NH4]+195.732859911
AllCCS[M+Na]+196.432859911
AllCCS[M-H]-191.932859911
AllCCS[M+Na-2H]-193.632859911
AllCCS[M+HCOO]-195.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
IsolinderenolideCCCC\C=C/CCCCCCCCC\C=C1\C(O)C(=C)OC1=O3304.1Standard polar33892256
IsolinderenolideCCCC\C=C/CCCCCCCCC\C=C1\C(O)C(=C)OC1=O2516.6Standard non polar33892256
IsolinderenolideCCCC\C=C/CCCCCCCCC\C=C1\C(O)C(=C)OC1=O2641.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Isolinderenolide,1TMS,isomer #1C=C1OC(=O)/C(=C\CCCCCCCCC/C=C\CCCC)C1O[Si](C)(C)C2673.0Semi standard non polar33892256
Isolinderenolide,1TBDMS,isomer #1C=C1OC(=O)/C(=C\CCCCCCCCC/C=C\CCCC)C1O[Si](C)(C)C(C)(C)C2922.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Isolinderenolide GC-MS (Non-derivatized) - 70eV, Positivesplash10-003v-9662000000-a4707e2eee5f86b0761b2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isolinderenolide GC-MS (1 TMS) - 70eV, Positivesplash10-0079-7197000000-764aba2289787eca569b2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isolinderenolide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 10V, Positive-QTOFsplash10-000i-1129000000-1a94fe45241e0179fb962016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 20V, Positive-QTOFsplash10-00yr-2392000000-1c1a27e07ab59e7ab7332016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 40V, Positive-QTOFsplash10-0536-9870000000-32c1a92e81a23b4e3b5a2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 10V, Negative-QTOFsplash10-001i-0019000000-2314dd30a117647793f92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 20V, Negative-QTOFsplash10-01qi-2196000000-458c2d065a410d9333b42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 40V, Negative-QTOFsplash10-066r-9050000000-18d30406652a8deb6ec12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 10V, Negative-QTOFsplash10-001i-0009000000-3b9bbceb7e7c6cb37f9a2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 20V, Negative-QTOFsplash10-000x-9035000000-76bc3ba6c2cd7dc927312021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 40V, Negative-QTOFsplash10-0bvu-9282000000-ab84d2cb2eab7c39439d2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 10V, Positive-QTOFsplash10-000i-1029000000-39e564efb3939b4c89582021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 20V, Positive-QTOFsplash10-0cdr-8598000000-9083d2b6d8e40243e9322021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isolinderenolide 40V, Positive-QTOFsplash10-0693-9300000000-d634507f3a073d49a4112021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB017327
KNApSAcK IDC00058530
Chemspider ID35014504
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131752302
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1865811
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .