Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 00:27:50 UTC
Update Date2022-03-07 02:56:04 UTC
HMDB IDHMDB0039104
Secondary Accession Numbers
  • HMDB39104
Metabolite Identification
Common Name(3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne
Description(3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne belongs to the class of organic compounds known as enynes. These are hydrocarbons containing an alkene and an alkyne group (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne is found, on average, in the highest concentration within mugworts (Artemisia vulgaris) (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne has also been detected, but not quantified in, safflowers (Carthamus tinctorius). This could make (3E,5Z)-1,3,5-tridecatriene-7,9,11-triyne a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne.
Structure
Data?1563863314
SynonymsNot Available
Chemical FormulaC13H10
Average Molecular Weight166.2185
Monoisotopic Molecular Weight166.07825032
IUPAC Name(3E,5E)-trideca-1,3,5-trien-7,9,11-triyne
Traditional Name(3E,5E)-trideca-1,3,5-trien-7,9,11-triyne
CAS Registry Number126381-91-7
SMILES
CC#CC#CC#C\C=C\C=C\C=C
InChI Identifier
InChI=1S/C13H10/c1-3-5-7-9-11-13-12-10-8-6-4-2/h3,5,7,9,11H,1H2,2H3/b7-5+,11-9+
InChI KeyAJWRNFIZKHPOHC-JEGFTUTRSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as enynes. These are hydrocarbons containing an alkene and an alkyne group.
KingdomOrganic compounds
Super ClassHydrocarbons
ClassUnsaturated hydrocarbons
Sub ClassEnynes
Direct ParentEnynes
Alternative Parents
Substituents
  • Enyne
  • Unsaturated aliphatic hydrocarbon
  • Olefin
  • Acyclic olefin
  • Acyclic acetylene
  • Acetylene
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.85 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0078 g/LALOGPS
logP4.44ALOGPS
logP3.97ChemAxon
logS-4.3ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity61.98 m³·mol⁻¹ChemAxon
Polarizability21.41 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+145.8631661259
DarkChem[M-H]-145.66931661259
DeepCCS[M+H]+128.19630932474
DeepCCS[M-H]-125.27930932474
DeepCCS[M-2H]-161.60630932474
DeepCCS[M+Na]+137.00330932474
AllCCS[M+H]+134.932859911
AllCCS[M+H-H2O]+130.632859911
AllCCS[M+NH4]+138.932859911
AllCCS[M+Na]+140.032859911
AllCCS[M-H]-127.932859911
AllCCS[M+Na-2H]-128.732859911
AllCCS[M+HCOO]-129.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyneCC#CC#CC#C\C=C\C=C\C=C2473.0Standard polar33892256
(3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyneCC#CC#CC#C\C=C\C=C\C=C1699.1Standard non polar33892256
(3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyneCC#CC#CC#C\C=C\C=C\C=C1714.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne GC-MS (Non-derivatized) - 70eV, Positivesplash10-014i-5900000000-0ee64df4c6b05966e5d42017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 10V, Positive-QTOFsplash10-014i-1900000000-b438c29f7769f22f91522016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 20V, Positive-QTOFsplash10-014i-5900000000-3adabf34ff05ba1f12f22016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 40V, Positive-QTOFsplash10-0ufr-9200000000-17650d5d688708d7d4d82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 10V, Negative-QTOFsplash10-014i-0900000000-2266a765b43371823aad2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 20V, Negative-QTOFsplash10-014i-0900000000-d764ff14d0c9a08fe78b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 40V, Negative-QTOFsplash10-00kb-9800000000-3aacac7259dd69c874c32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 10V, Positive-QTOFsplash10-014l-9800000000-fb049488771ccac042512021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 20V, Positive-QTOFsplash10-002o-9100000000-f6725d752e274b50ddda2021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 40V, Positive-QTOFsplash10-004i-9100000000-f6cc5b88b37c3f0d4a772021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 10V, Negative-QTOFsplash10-014i-0900000000-efb20e965011221811a32021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 20V, Negative-QTOFsplash10-014i-0900000000-0b916ad49a7bba0d083d2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3E,5Z)-1,3,5-Tridecatriene-7,9,11-triyne 40V, Negative-QTOFsplash10-0079-5900000000-6d1ff08c0f3431f2459a2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB004173
KNApSAcK IDNot Available
Chemspider ID4479622
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound5322029
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1874231
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .