Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:06:50 UTC
Update Date2022-03-07 02:56:16 UTC
HMDB IDHMDB0039608
Secondary Accession Numbers
  • HMDB39608
Metabolite Identification
Common NameGigantetronenin
DescriptionGigantetronenin is found in fruits. Gigantetronenin is a constituent of Annona muricata (soursop).
Structure
Data?1601241695
SynonymsNot Available
Chemical FormulaC37H66O7
Average Molecular Weight622.928
Monoisotopic Molecular Weight622.480854465
IUPAC Name(5S)-3-[(2R)-2-hydroxy-7-[(2S,5R)-5-[(1R,4R,5R,8Z)-1,4,5-trihydroxyhenicos-8-en-1-yl]oxolan-2-yl]heptyl]-5-methyl-2,5-dihydrofuran-2-one
Traditional Name(5S)-3-[(2R)-2-hydroxy-7-[(2S,5R)-5-[(1R,4R,5R,8Z)-1,4,5-trihydroxyhenicos-8-en-1-yl]oxolan-2-yl]heptyl]-5-methyl-5H-furan-2-one
CAS Registry Number145403-31-2
SMILES
CCCCCCCCCCCC\C=C/CC[C@@H](O)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1
InChI Identifier
InChI=1S/C37H66O7/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-19-22-33(39)34(40)24-25-35(41)36-26-23-32(44-36)21-18-16-17-20-31(38)28-30-27-29(2)43-37(30)42/h14-15,27,29,31-36,38-41H,3-13,16-26,28H2,1-2H3/b15-14-/t29-,31+,32-,33+,34+,35+,36+/m0/s1
InChI KeyLFIZQGRMDGWRQH-WSDOGQQSSA-N
Chemical Taxonomy
ClassificationNot classified
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point57 - 59 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility1.2e-05 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.001 g/LALOGPS
logP7.05ALOGPS
logP8.23ChemAxon
logS-5.8ALOGPS
pKa (Strongest Acidic)13.26ChemAxon
pKa (Strongest Basic)-2.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area116.45 ŲChemAxon
Rotatable Bond Count27ChemAxon
Refractivity179.66 m³·mol⁻¹ChemAxon
Polarizability77.54 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+248.63530932474
DeepCCS[M-H]-246.8130932474
DeepCCS[M-2H]-280.05130932474
DeepCCS[M+Na]+254.24130932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
GigantetroneninCCCCCCCCCCCC\C=C/CC[C@@H](O)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O15258.8Standard polar33892256
GigantetroneninCCCCCCCCCCCC\C=C/CC[C@@H](O)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O14408.2Standard non polar33892256
GigantetroneninCCCCCCCCCCCC\C=C/CC[C@@H](O)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O14933.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Gigantetronenin,1TMS,isomer #1CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O14766.8Semi standard non polar33892256
Gigantetronenin,1TMS,isomer #2CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@@H](CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1)O[Si](C)(C)C4775.0Semi standard non polar33892256
Gigantetronenin,1TMS,isomer #3CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@H](O)CC[C@@H](O[Si](C)(C)C)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O14770.7Semi standard non polar33892256
Gigantetronenin,1TMS,isomer #4CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C)O14786.9Semi standard non polar33892256
Gigantetronenin,2TMS,isomer #1CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C)[C@@H](CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1)O[Si](C)(C)C4734.6Semi standard non polar33892256
Gigantetronenin,2TMS,isomer #2CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C)[C@H](O)CC[C@@H](O[Si](C)(C)C)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O14688.6Semi standard non polar33892256
Gigantetronenin,2TMS,isomer #3CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C)O14708.0Semi standard non polar33892256
Gigantetronenin,2TMS,isomer #4CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@@H](CC[C@@H](O[Si](C)(C)C)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1)O[Si](C)(C)C4694.5Semi standard non polar33892256
Gigantetronenin,2TMS,isomer #5CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@@H](CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C)O1)O[Si](C)(C)C4720.0Semi standard non polar33892256
Gigantetronenin,2TMS,isomer #6CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@H](O)CC[C@@H](O[Si](C)(C)C)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C)O14718.8Semi standard non polar33892256
Gigantetronenin,3TMS,isomer #1CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C)[C@@H](CC[C@@H](O[Si](C)(C)C)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1)O[Si](C)(C)C4654.5Semi standard non polar33892256
Gigantetronenin,3TMS,isomer #2CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C)[C@@H](CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C)O1)O[Si](C)(C)C4676.0Semi standard non polar33892256
Gigantetronenin,3TMS,isomer #3CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C)[C@H](O)CC[C@@H](O[Si](C)(C)C)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C)O14628.2Semi standard non polar33892256
Gigantetronenin,3TMS,isomer #4CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@@H](CC[C@@H](O[Si](C)(C)C)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C)O1)O[Si](C)(C)C4637.5Semi standard non polar33892256
Gigantetronenin,1TBDMS,isomer #1CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O14983.0Semi standard non polar33892256
Gigantetronenin,1TBDMS,isomer #2CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@@H](CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1)O[Si](C)(C)C(C)(C)C4989.5Semi standard non polar33892256
Gigantetronenin,1TBDMS,isomer #3CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@H](O)CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O14978.1Semi standard non polar33892256
Gigantetronenin,1TBDMS,isomer #4CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C(C)(C)C)O15011.6Semi standard non polar33892256
Gigantetronenin,2TBDMS,isomer #1CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@@H](CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1)O[Si](C)(C)C(C)(C)C5141.0Semi standard non polar33892256
Gigantetronenin,2TBDMS,isomer #2CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@H](O)CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O15129.3Semi standard non polar33892256
Gigantetronenin,2TBDMS,isomer #3CCCCCCCCCCCC/C=C\CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@H](O)CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C(C)(C)C)O15153.3Semi standard non polar33892256
Gigantetronenin,2TBDMS,isomer #4CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@@H](CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H](CCCCC[C@@H](O)CC2=C[C@H](C)OC2=O)O1)O[Si](C)(C)C(C)(C)C5129.4Semi standard non polar33892256
Gigantetronenin,2TBDMS,isomer #5CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@@H](CC[C@@H](O)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C(C)(C)C)O1)O[Si](C)(C)C(C)(C)C5160.4Semi standard non polar33892256
Gigantetronenin,2TBDMS,isomer #6CCCCCCCCCCCC/C=C\CC[C@@H](O)[C@H](O)CC[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1CC[C@H](CCCCC[C@H](CC2=C[C@H](C)OC2=O)O[Si](C)(C)C(C)(C)C)O15153.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_1_4) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_2_5) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_2_6) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_3_2) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_3_3) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TMS_3_4) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_1_4) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_2_4) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_2_5) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS (TBDMS_2_6) - 70eV, PositiveNot Available2021-10-16Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Gigantetronenin GC-MS ("Gigantetronenin,1TMS,#1" TMS) - 70eV, PositiveNot Available2021-11-02Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gigantetronenin 10V, Positive-QTOFsplash10-000i-1111194000-15d922cb8a9bc80aea032021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gigantetronenin 20V, Positive-QTOFsplash10-000i-4010092000-f59ed6051354706b0dd12021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gigantetronenin 40V, Positive-QTOFsplash10-052f-9211100000-eff7407e6619af7bdf632021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gigantetronenin 10V, Negative-QTOFsplash10-00di-2000009000-2611c100af9782b9b9862021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gigantetronenin 20V, Negative-QTOFsplash10-0fk9-1245139000-abf12980b4c13eef01bc2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Gigantetronenin 40V, Negative-QTOFsplash10-0gbc-9872412000-98db1ef5606bef2759582021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDC00044176
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1878771
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.