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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:16:46 UTC
Update Date2022-03-07 02:56:19 UTC
HMDB IDHMDB0039740
Secondary Accession Numbers
  • HMDB39740
Metabolite Identification
Common NameIsoamericanol A
DescriptionIsoamericanol A belongs to the class of organic compounds known as phenylbenzo-1,4-dioxanes. These are benzo-1,3-dioxanes having a phenyl group attached to the 1,4-dioxane moiety. Isoamericanol A has been detected, but not quantified in, american pokeweeds (Phytolacca americana) and fruits. This could make isoamericanol a a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on Isoamericanol A.
Structure
Data?1563863430
Synonyms
ValueSource
4'-ThioadenosineHMDB
IsoamericanolHMDB
Chemical FormulaC18H18O6
Average Molecular Weight330.3319
Monoisotopic Molecular Weight330.110338308
IUPAC Name4-[3-(hydroxymethyl)-7-[(1Z)-3-hydroxyprop-1-en-1-yl]-2,3-dihydro-1,4-benzodioxin-2-yl]benzene-1,2-diol
Traditional Name4-[3-(hydroxymethyl)-7-[(1Z)-3-hydroxyprop-1-en-1-yl]-2,3-dihydro-1,4-benzodioxin-2-yl]benzene-1,2-diol
CAS Registry Number121620-06-2
SMILES
OC\C=C/C1=CC2=C(OC(CO)C(O2)C2=CC(O)=C(O)C=C2)C=C1
InChI Identifier
InChI=1S/C18H18O6/c19-7-1-2-11-3-6-15-16(8-11)24-18(17(10-20)23-15)12-4-5-13(21)14(22)9-12/h1-6,8-9,17-22H,7,10H2/b2-1-
InChI KeyPPZYUSOIUGJLFB-UPHRSURJSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylbenzo-1,4-dioxanes. These are benzo-1,3-dioxanes having a phenyl group attached to the 1,4-dioxane moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassBenzodioxanes
Sub ClassPhenylbenzodioxanes
Direct ParentPhenylbenzo-1,4-dioxanes
Alternative Parents
Substituents
  • 2-phenylbenzo-1,4-dioxane
  • Benzo-1,4-dioxane
  • Catechol
  • Styrene
  • Alkyl aryl ether
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Para-dioxin
  • Benzenoid
  • Ether
  • Oxacycle
  • Organic oxygen compound
  • Organooxygen compound
  • Alcohol
  • Primary alcohol
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point157 - 159 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility701.4 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.078 g/LALOGPS
logP1.83ALOGPS
logP1.88ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)9.21ChemAxon
pKa (Strongest Basic)-2.5ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area99.38 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity88.36 m³·mol⁻¹ChemAxon
Polarizability34.08 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+179.4931661259
DarkChem[M-H]-175.2531661259
DeepCCS[M+H]+184.46230932474
DeepCCS[M-H]-181.95530932474
DeepCCS[M-2H]-216.52130932474
DeepCCS[M+Na]+192.52130932474
AllCCS[M+H]+177.632859911
AllCCS[M+H-H2O]+174.532859911
AllCCS[M+NH4]+180.432859911
AllCCS[M+Na]+181.232859911
AllCCS[M-H]-178.232859911
AllCCS[M+Na-2H]-177.932859911
AllCCS[M+HCOO]-177.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Isoamericanol AOC\C=C/C1=CC2=C(OC(CO)C(O2)C2=CC(O)=C(O)C=C2)C=C13777.2Standard polar33892256
Isoamericanol AOC\C=C/C1=CC2=C(OC(CO)C(O2)C2=CC(O)=C(O)C=C2)C=C13182.3Standard non polar33892256
Isoamericanol AOC\C=C/C1=CC2=C(OC(CO)C(O2)C2=CC(O)=C(O)C=C2)C=C13349.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Isoamericanol A,1TMS,isomer #1C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O)C(O)=C3)OC2=C13327.4Semi standard non polar33892256
Isoamericanol A,1TMS,isomer #2C[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O)C(O)=C13234.7Semi standard non polar33892256
Isoamericanol A,1TMS,isomer #3C[Si](C)(C)OC1=CC(C2OC3=CC(/C=C\CO)=CC=C3OC2CO)=CC=C1O3228.2Semi standard non polar33892256
Isoamericanol A,1TMS,isomer #4C[Si](C)(C)OC1=CC=C(C2OC3=CC(/C=C\CO)=CC=C3OC2CO)C=C1O3243.9Semi standard non polar33892256
Isoamericanol A,2TMS,isomer #1C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O[Si](C)(C)C)C(O)=C3)OC2=C13251.6Semi standard non polar33892256
Isoamericanol A,2TMS,isomer #2C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O)C(O[Si](C)(C)C)=C3)OC2=C13243.1Semi standard non polar33892256
Isoamericanol A,2TMS,isomer #3C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C)C(C3=CC=C(O)C(O)=C3)OC2=C13196.1Semi standard non polar33892256
Isoamericanol A,2TMS,isomer #4C[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O[Si](C)(C)C)C(O)=C13174.8Semi standard non polar33892256
Isoamericanol A,2TMS,isomer #5C[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O)C(O[Si](C)(C)C)=C13165.9Semi standard non polar33892256
Isoamericanol A,2TMS,isomer #6C[Si](C)(C)OC1=CC=C(C2OC3=CC(/C=C\CO)=CC=C3OC2CO)C=C1O[Si](C)(C)C3249.3Semi standard non polar33892256
Isoamericanol A,3TMS,isomer #1C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C3)OC2=C13241.2Semi standard non polar33892256
Isoamericanol A,3TMS,isomer #2C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C)C(C3=CC=C(O[Si](C)(C)C)C(O)=C3)OC2=C13149.2Semi standard non polar33892256
Isoamericanol A,3TMS,isomer #3C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C)C(C3=CC=C(O)C(O[Si](C)(C)C)=C3)OC2=C13150.6Semi standard non polar33892256
Isoamericanol A,3TMS,isomer #4C[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C13168.5Semi standard non polar33892256
Isoamericanol A,4TMS,isomer #1C[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C)C(C3=CC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)=C3)OC2=C13157.9Semi standard non polar33892256
Isoamericanol A,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O)C(O)=C3)OC2=C13598.9Semi standard non polar33892256
Isoamericanol A,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O)C(O)=C13511.1Semi standard non polar33892256
Isoamericanol A,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=CC(C2OC3=CC(/C=C\CO)=CC=C3OC2CO)=CC=C1O3514.1Semi standard non polar33892256
Isoamericanol A,1TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC1=CC=C(C2OC3=CC(/C=C\CO)=CC=C3OC2CO)C=C1O3539.2Semi standard non polar33892256
Isoamericanol A,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C(O)=C3)OC2=C13769.1Semi standard non polar33892256
Isoamericanol A,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O)C(O[Si](C)(C)C(C)(C)C)=C3)OC2=C13746.6Semi standard non polar33892256
Isoamericanol A,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C(C)(C)C)C(C3=CC=C(O)C(O)=C3)OC2=C13744.7Semi standard non polar33892256
Isoamericanol A,2TBDMS,isomer #4CC(C)(C)[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O[Si](C)(C)C(C)(C)C)C(O)=C13705.6Semi standard non polar33892256
Isoamericanol A,2TBDMS,isomer #5CC(C)(C)[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O)C(O[Si](C)(C)C(C)(C)C)=C13684.2Semi standard non polar33892256
Isoamericanol A,2TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC1=CC=C(C2OC3=CC(/C=C\CO)=CC=C3OC2CO)C=C1O[Si](C)(C)C(C)(C)C3738.3Semi standard non polar33892256
Isoamericanol A,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO)C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C3)OC2=C13947.4Semi standard non polar33892256
Isoamericanol A,3TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C(C)(C)C)C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C(O)=C3)OC2=C13922.3Semi standard non polar33892256
Isoamericanol A,3TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C(C)(C)C)C(C3=CC=C(O)C(O[Si](C)(C)C(C)(C)C)=C3)OC2=C13905.6Semi standard non polar33892256
Isoamericanol A,3TBDMS,isomer #4CC(C)(C)[Si](C)(C)OCC1OC2=CC=C(/C=C\CO)C=C2OC1C1=CC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C13878.7Semi standard non polar33892256
Isoamericanol A,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC/C=C\C1=CC=C2OC(CO[Si](C)(C)C(C)(C)C)C(C3=CC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)=C3)OC2=C14061.7Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Isoamericanol A GC-MS (Non-derivatized) - 70eV, Positivesplash10-0h2b-1697000000-be5fa8589bbaf37c246a2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isoamericanol A GC-MS (4 TMS) - 70eV, Positivesplash10-0udi-3000049000-fa138d31fe70a3c77e5f2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Isoamericanol A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 10V, Positive-QTOFsplash10-03e9-0529000000-d530e48f65a4790374192016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 20V, Positive-QTOFsplash10-01p9-1594000000-15608414a225c5b2f2e82016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 40V, Positive-QTOFsplash10-001j-1900000000-3af7b3eef76088369e442016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 10V, Negative-QTOFsplash10-004i-0029000000-de7ed01c2b5bc2c901452016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 20V, Negative-QTOFsplash10-01r2-1679000000-232ece0ad7edd63e0a812016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 40V, Negative-QTOFsplash10-000t-2910000000-9dff8cbb4df5af0bec042016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 10V, Positive-QTOFsplash10-01q9-0029000000-1d32fd01a31ef799c6cf2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 20V, Positive-QTOFsplash10-03yi-0968000000-1a48347ec68cdd043a2e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 40V, Positive-QTOFsplash10-06si-0792000000-f31e3593a8adfa99e9af2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 10V, Negative-QTOFsplash10-004i-0079000000-36710b5f55df1b3726d22021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 20V, Negative-QTOFsplash10-02bs-0492000000-d68a4b241b1aabc6f4582021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Isoamericanol A 40V, Negative-QTOFsplash10-014r-1690000000-16054df12a99e999d1ed2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019382
KNApSAcK IDC00033058
Chemspider ID35014869
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131752715
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1879931
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .