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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 02:22:30 UTC
Update Date2022-03-07 02:56:44 UTC
HMDB IDHMDB0040789
Secondary Accession Numbers
  • HMDB40789
Metabolite Identification
Common NameBikoeniquinone A
DescriptionBikoeniquinone A belongs to the class of organic compounds known as carbazoles. Carbazoles are compounds containing a three ring system containing a pyrrole ring fused on either side to a benzene ring. Bikoeniquinone A has been detected, but not quantified in, herbs and spices. This could make bikoeniquinone a a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on Bikoeniquinone A.
Structure
Data?1563863588
Synonyms
ValueSource
1'-Methoxy-3,3'-dimethyl-[2,4'-bi-9H-carbazole]-1,4-dione, 9ciHMDB
Chemical FormulaC27H20N2O3
Average Molecular Weight420.4593
Monoisotopic Molecular Weight420.147392516
IUPAC Name2-(1-methoxy-3-methyl-9H-carbazol-4-yl)-3-methyl-4,9-dihydro-1H-carbazole-1,4-dione
Traditional Name2-(1-methoxy-3-methyl-9H-carbazol-4-yl)-3-methyl-9H-carbazole-1,4-dione
CAS Registry Number155519-84-9
SMILES
COC1=C2NC3=CC=CC=C3C2=C(C(C)=C1)C1=C(C)C(=O)C2=C(NC3=CC=CC=C23)C1=O
InChI Identifier
InChI=1S/C27H20N2O3/c1-13-12-19(32-3)24-22(15-8-4-6-10-17(15)28-24)20(13)21-14(2)26(30)23-16-9-5-7-11-18(16)29-25(23)27(21)31/h4-12,28-29H,1-3H3
InChI KeyWNIJCVSAQYOBMV-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as carbazoles. Carbazoles are compounds containing a three ring system containing a pyrrole ring fused on either side to a benzene ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassCarbazoles
Direct ParentCarbazoles
Alternative Parents
Substituents
  • Carbazole
  • Indole
  • Anisole
  • Aryl ketone
  • Alkyl aryl ether
  • Benzenoid
  • Vinylogous amide
  • Pyrrole
  • Heteroaromatic compound
  • Ketone
  • Azacycle
  • Ether
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.0014 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.00053 g/LALOGPS
logP4.82ALOGPS
logP5.05ChemAxon
logS-5.9ALOGPS
pKa (Strongest Acidic)9.94ChemAxon
pKa (Strongest Basic)-4.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area74.95 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity124.88 m³·mol⁻¹ChemAxon
Polarizability46.23 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+198.09731661259
DarkChem[M-H]-196.85531661259
DeepCCS[M-2H]-235.02330932474
DeepCCS[M+Na]+210.23830932474
AllCCS[M+H]+204.732859911
AllCCS[M+H-H2O]+201.932859911
AllCCS[M+NH4]+207.232859911
AllCCS[M+Na]+208.032859911
AllCCS[M-H]-196.732859911
AllCCS[M+Na-2H]-195.832859911
AllCCS[M+HCOO]-194.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Bikoeniquinone ACOC1=C2NC3=CC=CC=C3C2=C(C(C)=C1)C1=C(C)C(=O)C2=C(NC3=CC=CC=C23)C1=O5058.7Standard polar33892256
Bikoeniquinone ACOC1=C2NC3=CC=CC=C3C2=C(C(C)=C1)C1=C(C)C(=O)C2=C(NC3=CC=CC=C23)C1=O4162.1Standard non polar33892256
Bikoeniquinone ACOC1=C2NC3=CC=CC=C3C2=C(C(C)=C1)C1=C(C)C(=O)C2=C(NC3=CC=CC=C23)C1=O4297.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Bikoeniquinone A,1TMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C([NH]C4=CC=CC=C34)C2=O)C2=C1N([Si](C)(C)C)C1=CC=CC=C214245.8Semi standard non polar33892256
Bikoeniquinone A,1TMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C([NH]C4=CC=CC=C34)C2=O)C2=C1N([Si](C)(C)C)C1=CC=CC=C213661.6Standard non polar33892256
Bikoeniquinone A,1TMS,isomer #2COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C)C2=CC=CC=C32)C2=C1[NH]C1=CC=CC=C124165.9Semi standard non polar33892256
Bikoeniquinone A,1TMS,isomer #2COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C)C2=CC=CC=C32)C2=C1[NH]C1=CC=CC=C123670.9Standard non polar33892256
Bikoeniquinone A,2TMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C)C2=CC=CC=C32)C2=C1N([Si](C)(C)C)C1=CC=CC=C214051.9Semi standard non polar33892256
Bikoeniquinone A,2TMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C)C2=CC=CC=C32)C2=C1N([Si](C)(C)C)C1=CC=CC=C213706.4Standard non polar33892256
Bikoeniquinone A,1TBDMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C([NH]C4=CC=CC=C34)C2=O)C2=C1N([Si](C)(C)C(C)(C)C)C1=CC=CC=C214407.1Semi standard non polar33892256
Bikoeniquinone A,1TBDMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C([NH]C4=CC=CC=C34)C2=O)C2=C1N([Si](C)(C)C(C)(C)C)C1=CC=CC=C213829.5Standard non polar33892256
Bikoeniquinone A,1TBDMS,isomer #2COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C32)C2=C1[NH]C1=CC=CC=C124345.5Semi standard non polar33892256
Bikoeniquinone A,1TBDMS,isomer #2COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C32)C2=C1[NH]C1=CC=CC=C123844.2Standard non polar33892256
Bikoeniquinone A,2TBDMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C32)C2=C1N([Si](C)(C)C(C)(C)C)C1=CC=CC=C214307.7Semi standard non polar33892256
Bikoeniquinone A,2TBDMS,isomer #1COC1=CC(C)=C(C2=C(C)C(=O)C3=C(C2=O)N([Si](C)(C)C(C)(C)C)C2=CC=CC=C32)C2=C1N([Si](C)(C)C(C)(C)C)C1=CC=CC=C214048.4Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Bikoeniquinone A GC-MS (Non-derivatized) - 70eV, Positivesplash10-052f-0139500000-28809dd2408f367742d52017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Bikoeniquinone A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 10V, Positive-QTOFsplash10-00di-0000900000-396ce3d85050edb450f92017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 20V, Positive-QTOFsplash10-0103-0695500000-4b8051049c2cadd9471b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 40V, Positive-QTOFsplash10-0l06-1941100000-fcd7538bd1c6832bdc882017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 10V, Negative-QTOFsplash10-014i-0000900000-8ca1f33eab9b234222362017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 20V, Negative-QTOFsplash10-014i-0012900000-cb1c9f568e920951a7652017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 40V, Negative-QTOFsplash10-0gbc-0947100000-360138d0a41dff717c3a2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 10V, Negative-QTOFsplash10-014i-0000900000-f2ddab78722711be13592021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 20V, Negative-QTOFsplash10-014i-0000900000-1b5dde7668adb4ec2edb2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 40V, Negative-QTOFsplash10-0udi-0005900000-a133885d4170bd29ac0c2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 10V, Positive-QTOFsplash10-00di-0000900000-94421d58d3fd72aed83c2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 20V, Positive-QTOFsplash10-00di-0000900000-1e56d2ea482b8000d3dd2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Bikoeniquinone A 40V, Positive-QTOFsplash10-014i-0244900000-68720a8ba8ae7c6822c62021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB020605
KNApSAcK IDC00054639
Chemspider ID8607691
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10432264
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1886411
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .