Hmdb loader
Identification
HMDB Protein ID HMDBP00947
Secondary Accession Numbers
  • 6235
Name Protein O-mannosyl-transferase 2
Synonyms
  1. Dolichyl-phosphate-mannose--protein mannosyltransferase 2
Gene Name POMT2
Protein Type Unknown
Biological Properties
General Function Involved in mannosyltransferase activity
Specific Function Transfers mannosyl residues to the hydroxyl group of serine or threonine residues. Coexpression of both POMT1 and POMT2 is necessary for enzyme activity, expression of either POMT1 or POMT2 alone is insufficient.
Pathways
  • Other types of O-glycan biosynthesis
  • protein glycosylation
Reactions
Dolichyl phosphate D-mannose + protein → Dolichol-20 + O-D-mannosylprotein details
Dolichyl phosphate D-mannose + Protein serine → Dolichyl phosphate + details
GO Classification
Biological Process
protein O-linked glycosylation
Cellular Component
endoplasmic reticulum membrane
integral to membrane
Component
membrane
cell part
Function
catalytic activity
transferase activity
mannosyltransferase activity
transferase activity, transferring hexosyl groups
transferase activity, transferring glycosyl groups
Molecular Function
metal ion binding
dolichyl-phosphate-mannose-protein mannosyltransferase activity
Process
metabolic process
macromolecule metabolic process
protein amino acid o-linked glycosylation
macromolecule modification
protein modification process
protein amino acid glycosylation
Cellular Location
  1. Endoplasmic reticulum membrane
  2. Multi-pass membrane protein
Gene Properties
Chromosome Location 14
Locus 14q24
SNPs POMT2
Gene Sequence
>2253 bp
ATGCCGCCGGCCACGGGCGGAGGCCTGGCAGAGTCCGAGCTGCGTCCCCGGAGGGGCCGC
TGTGGCCCCCAGGCTGCTAGGGCCGCAGGCCGGGACGTGGCCGCTGAGGCTGTGGCGCGA
AGCCCCAAACGGCCTGCTTGGGGCTCACGGCGCTTCGAGGCGGTCGGCTGGTGGGCCCTG
CTGGCCTTGGTGACGCTGCTGTCCTTCGCCACCCGCTTCCACCGCTTGGACGAGCCGCCG
CACATCTGTTGGGATGAGACTCACTTTGGAAAAATGGGAAGTTACTATATCAACCGTACA
TTTTTCTTTGATGTGCACCCGCCCCTGGGAAAGATGCTGATAGGTCTTGCTGGCTACCTG
AGTGGATATGATGGTACCTTTTTGTTCCAGAAGCCTGGGGATAAATATGAGCATCACAGC
TACATGGGAATGAGAGGATTCTGTGCATTCCTTGGCTCCTGGCTGGTCCCCTTTGCCTAC
CTCACTGTACTGGATCTGTCCAAGTCCCTCTCGGCAGCACTGCTCACAGCTGCCCTCCTC
ACCTTTGACACGGGATGCCTCACTCTGTCCCAGTACATCCTCCTTGACCCCATCCTGATG
TTCTTCATCATGGCTGCCATGCTGAGCATGGTCAAGTACAACTCTTGCGCCGACAGGCCC
TTCTCTGCCCCCTGGTGGTTCTGGCTCAGCCTGACTGGCGTTAGTCTTGCTGGTGCTTTA
GGGGTCAAGTTTGTTGGCCTCTTTATCATCCTTCAAGTGGGGCTGAACACCATTGCAGAC
CTTTGGTACCTGTTCGGAGACCTCAGTCTTTCATTGGTGACTGTGGGAAAACACCTGACT
GCTCGTGTCCTGTGCCTCATAGTGCTGCCCCTGGCTCTCTATACAGCCACCTTTGCTGTT
CACTTCATGGTGCTGAGTAAAAGTGGCCCTGGTGACGGTTTCTTCAGTTCTGCCTTCCAG
GCCCGGCTTTCAGGGAACAACCTGCACAATGCTTCCATCCCTGAACACCTGGCCTACGGC
TCTGTGATCACTGTGAAGAACCTCCGGATGGCCATCGGCTATCTGCACTCCCACAGGCAC
CTCTACCCCGAGGGCATTGGTGCCCGTCAGCAGCAGGTCACCACCTATTTGCACAAGGAC
TACAACAACCTGTGGATTATCAAGAAACATAACACAAACTCAGATCCCCTAGACCCTTCC
TTCCCAGTGGAGTTTGTAAGACATGGAGACATTATTCGACTAGAACACAAAGAAACTTCC
CGGAACTTGCACAGTCACTATCATGAGGCCCCCATGACCCGGAAGCACTATCAGGTCACC
GGCTATGGCATAAATGGAACAGGGGACTCAAATGATTTCTGGCGGATTGAGGTCGTAAAC
AGAAAATTTGGAAACCGGATCAAAGTGCTGAGAAGTCGAATTCGCTTCATCCATTTGGTC
ACAGGTTGTGTCCTGGGCTCCTCGGGAAAGGTTCTGCCCAAGTGGGGCTGGGAGCAGTTG
GAAGTTACTTGCACCCCATACCTGAAAGAAACCCTCAACTCCATCTGGAATGTGGAGGAC
CATATCAATCCCAAGTTGCCAAACATCAGCCTGGATGTGCTACAGCCCAGTTTTCCTGAG
ATCTTGCTGGAATCCCACATGGTCATGATCCGGGGGAACAGTGGCCTCAAACCCAAGGAC
AATGAGTTCACGTCCAAACCCTGGCACTGGCCTATCAACTATCAGGGCCTACGCTTCTCA
GGGGTCAATGACACAGATTTCCGAGTCTATCTGCTTGGCAACCCGGTGGTTTGGTGGCTG
AATCTGTTGAGCATCGCCCTCTACCTCCTCTCAGGGAGCATCATTGCTGTAGCCATGCAG
AGAGGGGCACGGCTGCCAGCGGAGGTTGCAGGGTTGTCCCAGGTCCTGCTGCGAGGAGGC
GGCCAGGTCCTGCTCGGCTGGACACTCCATTACTTCCCGTTTTTCCTGATGGGCCGGGTC
CTCTACTTCCACCACTACTTCCCAGCCATGCTCTTCTCAAGCATGTTGACAGGCATTCTG
TGGGACACCCTCCTGCGGCTCTGTGCCTGGGGCTTGGCCTCATGGCCCCTGGCGAGGGGC
ATACATGTGGCGGGAATCCTGAGCCTGCTCCTGGGAACTGCCTACAGCTTCTACCTCTTC
CACCCTCTGGCTTACGGGATGGTTGGTCCCCTGGCCCAGGACCCCCAAAGTCCAATGGCA
GGACTAAGGTGGCTGGACTCATGGGACTTTTGA
Protein Properties
Number of Residues 750
Molecular Weight 84213.155
Theoretical pI 9.152
Pfam Domain Function
Signals Not Available
Transmembrane Regions Not Available
Protein Sequence
>Protein O-mannosyl-transferase 2
MPPATGGGLAESELRPRRGRCGPQAARAAGRDVAAEAVARSPKRPAWGSRRFEAVGWWAL
LALVTLLSFATRFHRLDEPPHICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYL
SGYDGTFLFQKPGDKYEHHSYMGMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALL
TFDTGCLTLSQYILLDPILMFFIMAAMLSMVKYNSCADRPFSAPWWFWLSLTGVSLAGAL
GVKFVGLFIILQVGLNTIADLWYLFGDLSLSLVTVGKHLTARVLCLIVLPLALYTATFAV
HFMVLSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRMAIGYLHSHRH
LYPEGIGARQQQVTTYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETS
RNLHSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLV
TGCVLGSSGKVLPKWGWEQLEVTCTPYLKETLNSIWNVEDHINPKLPNISLDVLQPSFPE
ILLESHMVMIRGNSGLKPKDNEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWL
NLLSIALYLLSGSIIAVAMQRGARLPAEVAGLSQVLLRGGGQVLLGWTLHYFPFFLMGRV
LYFHHYFPAMLFSSMLTGILWDTLLRLCAWGLASWPLARGIHVAGILSLLLGTAYSFYLF
HPLAYGMVGPLAQDPQSPMAGLRWLDSWDF
GenBank ID Protein 32455271
UniProtKB/Swiss-Prot ID Q9UKY4
UniProtKB/Swiss-Prot Entry Name POMT2_HUMAN
PDB IDs Not Available
GenBank Gene ID NM_013382.5
GeneCard ID POMT2
GenAtlas ID POMT2
HGNC ID HGNC:19743
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Bechtel S, Rosenfelder H, Duda A, Schmidt CP, Ernst U, Wellenreuther R, Mehrle A, Schuster C, Bahr A, Blocker H, Heubner D, Hoerlein A, Michel G, Wedler H, Kohrer K, Ottenwalder B, Poustka A, Wiemann S, Schupp I: The full-ORF clone resource of the German cDNA Consortium. BMC Genomics. 2007 Oct 31;8:399. [PubMed:17974005 ]
  3. Heilig R, Eckenberg R, Petit JL, Fonknechten N, Da Silva C, Cattolico L, Levy M, Barbe V, de Berardinis V, Ureta-Vidal A, Pelletier E, Vico V, Anthouard V, Rowen L, Madan A, Qin S, Sun H, Du H, Pepin K, Artiguenave F, Robert C, Cruaud C, Bruls T, Jaillon O, Friedlander L, Samson G, Brottier P, Cure S, Segurens B, Aniere F, Samain S, Crespeau H, Abbasi N, Aiach N, Boscus D, Dickhoff R, Dors M, Dubois I, Friedman C, Gouyvenoux M, James R, Madan A, Mairey-Estrada B, Mangenot S, Martins N, Menard M, Oztas S, Ratcliffe A, Shaffer T, Trask B, Vacherie B, Bellemere C, Belser C, Besnard-Gonnet M, Bartol-Mavel D, Boutard M, Briez-Silla S, Combette S, Dufosse-Laurent V, Ferron C, Lechaplais C, Louesse C, Muselet D, Magdelenat G, Pateau E, Petit E, Sirvain-Trukniewicz P, Trybou A, Vega-Czarny N, Bataille E, Bluet E, Bordelais I, Dubois M, Dumont C, Guerin T, Haffray S, Hammadi R, Muanga J, Pellouin V, Robert D, Wunderle E, Gauguet G, Roy A, Sainte-Marthe L, Verdier J, Verdier-Discala C, Hillier L, Fulton L, McPherson J, Matsuda F, Wilson R, Scarpelli C, Gyapay G, Wincker P, Saurin W, Quetier F, Waterston R, Hood L, Weissenbach J: The DNA sequence and analysis of human chromosome 14. Nature. 2003 Feb 6;421(6923):601-7. Epub 2003 Jan 1. [PubMed:12508121 ]
  4. Manya H, Chiba A, Yoshida A, Wang X, Chiba Y, Jigami Y, Margolis RU, Endo T: Demonstration of mammalian protein O-mannosyltransferase activity: coexpression of POMT1 and POMT2 required for enzymatic activity. Proc Natl Acad Sci U S A. 2004 Jan 13;101(2):500-5. Epub 2003 Dec 29. [PubMed:14699049 ]
  5. Willer T, Amselgruber W, Deutzmann R, Strahl S: Characterization of POMT2, a novel member of the PMT protein O-mannosyltransferase family specifically localized to the acrosome of mammalian spermatids. Glycobiology. 2002 Nov;12(11):771-83. [PubMed:12460945 ]
  6. van Reeuwijk J, Janssen M, van den Elzen C, Beltran-Valero de Bernabe D, Sabatelli P, Merlini L, Boon M, Scheffer H, Brockington M, Muntoni F, Huynen MA, Verrips A, Walsh CA, Barth PG, Brunner HG, van Bokhoven H: POMT2 mutations cause alpha-dystroglycan hypoglycosylation and Walker-Warburg syndrome. J Med Genet. 2005 Dec;42(12):907-12. Epub 2005 May 13. [PubMed:15894594 ]